RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
NOD1-203ENST00000413433 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
NOD1-203ENST00000413433 BANK1Q8NDB2 785 aa9.44□□□□□ -0.9
NOD1-203ENST00000413433 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
NOD1-203ENST00000413433 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
NOD1-203ENST00000413433 NPDC1Q9NQX5 325 aaPredicted RBP9.44□□□□□ -0.9
NOD1-203ENST00000413433 OATP04181 439 aa9.43□□□□□ -0.9
NOD1-203ENST00000413433 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
NOD1-203ENST00000413433 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
NOD1-203ENST00000413433 TSKSQ9UJT2 592 aa9.42□□□□□ -0.9
NOD1-203ENST00000413433 RFC5P40937 340 aa9.41□□□□□ -0.9
NOD1-203ENST00000413433 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
NOD1-203ENST00000413433 MTRQ99707 1265 aa9.41□□□□□ -0.9
NOD1-203ENST00000413433 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
NOD1-203ENST00000413433 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
NOD1-203ENST00000413433 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
NOD1-203ENST00000413433 TMCO4Q5TGY1 634 aa9.4□□□□□ -0.9
NOD1-203ENST00000413433 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
NOD1-203ENST00000413433 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 C3orf80F5H4A9 247 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 SNRKQ9NRH2 765 aa9.39□□□□□ -0.91
NOD1-203ENST00000413433 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
NOD1-203ENST00000413433 PEG3Q9GZU2 1588 aa9.38□□□□□ -0.91
NOD1-203ENST00000413433 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
NOD1-203ENST00000413433 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
NOD1-203ENST00000413433 TBC1D2Q9BYX2 928 aa9.38□□□□□ -0.91
NOD1-203ENST00000413433 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
NOD1-203ENST00000413433 LAMC3Q9Y6N6 1575 aa9.37□□□□□ -0.91
NOD1-203ENST00000413433 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
NOD1-203ENST00000413433 PDE4CQ08493 712 aa9.37□□□□□ -0.91
NOD1-203ENST00000413433 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
NOD1-203ENST00000413433 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
NOD1-203ENST00000413433 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
NOD1-203ENST00000413433 GGCXP38435 758 aa9.35□□□□□ -0.91
NOD1-203ENST00000413433 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
NOD1-203ENST00000413433 PXYLP1Q8TE99 480 aa9.35□□□□□ -0.91
NOD1-203ENST00000413433 CDCA7LQ96GN5 454 aa9.35□□□□□ -0.91
NOD1-203ENST00000413433 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
NOD1-203ENST00000413433 PRSS12P56730 875 aa9.34□□□□□ -0.91
NOD1-203ENST00000413433 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
NOD1-203ENST00000413433 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
NOD1-203ENST00000413433 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
NOD1-203ENST00000413433 SMAPO00193 183 aa9.33□□□□□ -0.92
NOD1-203ENST00000413433 ABL2P42684 1182 aa9.33□□□□□ -0.92
NOD1-203ENST00000413433 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
NOD1-203ENST00000413433 WIZO95785 1651 aa9.32□□□□□ -0.92
NOD1-203ENST00000413433 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
NOD1-203ENST00000413433 PPP2R2DQ66LE6 453 aa9.32□□□□□ -0.92
NOD1-203ENST00000413433 LIMD1Q9UGP4 676 aa9.32□□□□□ -0.92
NOD1-203ENST00000413433 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
NOD1-203ENST00000413433 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
NOD1-203ENST00000413433 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
NOD1-203ENST00000413433 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
NOD1-203ENST00000413433 MTMR14Q8NCE2 650 aa9.31□□□□□ -0.92
NOD1-203ENST00000413433 MRC2Q9UBG0 1479 aa9.3□□□□□ -0.92
NOD1-203ENST00000413433 IRF5Q13568 498 aa9.3□□□□□ -0.92
NOD1-203ENST00000413433 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
NOD1-203ENST00000413433 RBM46Q8TBY0 533 aaKnown RBP9.3□□□□□ -0.92
NOD1-203ENST00000413433 GLMNQ92990 594 aa9.3□□□□□ -0.92
NOD1-203ENST00000413433 TATDN2Q93075 761 aa9.3□□□□□ -0.92
NOD1-203ENST00000413433 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
NOD1-203ENST00000413433 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
NOD1-203ENST00000413433 RNF40O75150 1001 aa9.28□□□□□ -0.92
NOD1-203ENST00000413433 APLP1P51693 650 aa9.28□□□□□ -0.92
NOD1-203ENST00000413433 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
NOD1-203ENST00000413433 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
NOD1-203ENST00000413433 MTMR7Q9Y216 660 aa9.28□□□□□ -0.92
NOD1-203ENST00000413433 SOCS7O14512 581 aa9.27□□□□□ -0.93
NOD1-203ENST00000413433 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
NOD1-203ENST00000413433 RGS22Q8NE09 1264 aa9.27□□□□□ -0.93
NOD1-203ENST00000413433 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
NOD1-203ENST00000413433 FANCD2Q9BXW9 1451 aa9.27□□□□□ -0.93
NOD1-203ENST00000413433 RSF1Q96T23 1441 aaPredicted RBP9.26□□□□□ -0.93
NOD1-203ENST00000413433 POM121CA8CG34 1229 aa9.26□□□□□ -0.93
NOD1-203ENST00000413433 AP1G2O75843 785 aa9.26□□□□□ -0.93
NOD1-203ENST00000413433 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
NOD1-203ENST00000413433 FBXO31Q5XUX0 539 aaPredicted RBP9.26□□□□□ -0.93
NOD1-203ENST00000413433 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
NOD1-203ENST00000413433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
NOD1-203ENST00000413433 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
NOD1-203ENST00000413433 CEP164Q9UPV0 1460 aa9.25□□□□□ -0.93
NOD1-203ENST00000413433 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
NOD1-203ENST00000413433 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
NOD1-203ENST00000413433 WDR62O43379 1518 aa9.24□□□□□ -0.93
NOD1-203ENST00000413433 SPTLC1O15269 473 aa9.23□□□□□ -0.93
NOD1-203ENST00000413433 DGAT1O75907 488 aa9.23□□□□□ -0.93
NOD1-203ENST00000413433 RSBN1LQ6PCB5 846 aaPredicted RBP9.23□□□□□ -0.93
NOD1-203ENST00000413433 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
NOD1-203ENST00000413433 CFTRP13569 1480 aa9.22□□□□□ -0.93
NOD1-203ENST00000413433 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
NOD1-203ENST00000413433 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
NOD1-203ENST00000413433 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
NOD1-203ENST00000413433 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
NOD1-203ENST00000413433 COPS2P61201 443 aa9.22□□□□□ -0.93
NOD1-203ENST00000413433 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
NOD1-203ENST00000413433 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
NOD1-203ENST00000413433 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms