RNA–Protein interactions for RNA: ENST00000412164.1

HMGN2P35-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 35, humanhuman

BASIC

Gene HMGN2P35, Length 270 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P35-201ENST00000412164 ZNF513Q8N8E2 541 aaPredicted RBP3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 SIRT1Q96EB6 747 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 FAM210AQ96ND0 272 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 TSPYL1Q9H0U9 437 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 GOLGA6AQ9NYA3 693 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 KIF16BQ96L93 1317 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 RAD54L2Q9Y4B4 1467 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 TULP2O00295 520 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 COQ9O75208 318 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 POLD1P28340 1107 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 RIPK4P57078 832 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 CSPP1Q1MSJ5 1256 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZC3H12AQ5D1E8 599 aaKnown RBP3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 C1QTNF12Q5T7M4 302 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 EP400NLQ6ZTU2 488 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 CHMP4CQ96CF2 233 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 MYCBPQ99417 103 aaPredicted RBP3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 TRAIPQ9BWF2 469 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 MYH16Q9H6N6 1097 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 RAD50Q92878 1312 aa3.37□□□□□ -1.87
HMGN2P35-201ENST00000412164 KLHL33A6NCF5 533 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 ESPNB1AK53 854 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 TPD52L2O43399 206 aaKnown RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 CCDC172P0C7W6 258 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 HOXB1P14653 301 aaPredicted RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 ITGAEP38570 1179 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 TMCO4Q5TGY1 634 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 KRBA2Q6ZNG9 492 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 NOL8Q76FK4 1167 aaKnown RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 APBB1IPQ7Z5R6 666 aaPredicted RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 AEBP1Q8IUX7 1158 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 HELBQ8NG08 1087 aaPredicted RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 SNRNP27Q8WVK2 155 aaKnown RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 EVI5LQ96CN4 794 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 NCAPGQ9BPX3 1015 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 CCDC94Q9BW85 323 aaPredicted RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 CEP126Q9P2H0 1117 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 SUGT1Q9Y2Z0 365 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 BOLA1Q9Y3E2 137 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 MRVI1Q9Y6F6 885 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZC3H4Q9UPT8 1303 aaKnown RBP3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 EEA1Q15075 1411 aa3.36□□□□□ -1.87
HMGN2P35-201ENST00000412164 ARID3CA6NKF2 412 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 CCER2I3L3R5 266 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 EXOC5O00471 708 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 IPO8O15397 1037 aaKnown RBP3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 KIF1CO43896 1103 aaKnown RBP3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 CAPN2P17655 700 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 CD151P48509 253 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 MCCD1P59942 119 aaPredicted RBP3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 FOXD4Q12950 439 aaPredicted RBP3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 C11orf91Q3C1V1 193 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 L1TD1Q5T7N2 865 aaKnown RBP3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 NBPF3Q9H094 633 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 SMC3Q9UQE7 1217 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 PPME1Q9Y570 386 aa3.35□□□□□ -1.87
HMGN2P35-201ENST00000412164 PEG3Q9GZU2 1588 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CCDC189A1A4V9 331 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 KIF3CO14782 793 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 DHX16O60231 1041 aaKnown RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 MARCH6O60337 910 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZRANB2O95218 330 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CT47B1P0C2W7 299 aaPredicted RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 VASPP50552 380 aaPredicted RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 RHBDL3P58872 404 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 PDAP1Q13442 181 aaKnown RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CDC37Q16543 378 aaPredicted RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZNF280DQ6N043 979 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 ANKRD13AQ8IZ07 590 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CXorf38Q8TB03 319 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CALR3Q96L12 384 aaKnown RBP3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CABP2Q9NPB3 220 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 SMC4Q9NTJ3 1288 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 DONSONQ9NYP3 566 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 ANAPC4Q9UJX5 808 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 SYNPO2Q9UMS6 1093 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZBED9Q6R2W3 1325 aa3.34□□□□□ -1.87
HMGN2P35-201ENST00000412164 CTAGE5O15320 804 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 ANP32CO43423 234 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 PPFIA4O75335 1185 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 PAX7P23759 505 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 NFKBIBQ15653 356 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 ZRSR2Q15696 482 aaKnown RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 LONRF3Q496Y0 759 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 SWT1Q5T5J6 900 aaKnown RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 GORABQ5T7V8 394 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 RBM26Q5T8P6 1007 aaKnown RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 CLEC4GQ6UXB4 293 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 GET4Q7L5D6 327 aaPredicted RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 ZNF710Q8N1W2 664 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 ATL2Q8NHH9 583 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 RNF166Q96A37 237 aaPredicted RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 SPATA32Q96LK8 384 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 UBA5Q9GZZ9 404 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 KDM4CQ9H3R0 1056 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 BRMS1Q9HCU9 246 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 MED4Q9NPJ6 270 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 IGSF5Q9NSI5 407 aa3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 CGNQ9P2M7 1197 aaKnown RBP3.33□□□□□ -1.88
HMGN2P35-201ENST00000412164 ERBB3P21860 1342 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms