RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
LSM8-202ENST00000411938 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
LSM8-202ENST00000411938 APLP2Q06481 763 aa10.72□□□□□ -0.69
LSM8-202ENST00000411938 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
LSM8-202ENST00000411938 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
LSM8-202ENST00000411938 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
LSM8-202ENST00000411938 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
LSM8-202ENST00000411938 GLI3P10071 1580 aa10.72□□□□□ -0.69
LSM8-202ENST00000411938 A0A0G2JS52 829 aa10.71□□□□□ -0.69
LSM8-202ENST00000411938 FOXO3O43524 673 aa10.71□□□□□ -0.69
LSM8-202ENST00000411938 MYT1Q01538 1121 aa10.71□□□□□ -0.69
LSM8-202ENST00000411938 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
LSM8-202ENST00000411938 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
LSM8-202ENST00000411938 E9PCH4 1651 aa10.7□□□□□ -0.7
LSM8-202ENST00000411938 ROBO2Q9HCK4 1378 aa10.69□□□□□ -0.7
LSM8-202ENST00000411938 HAP1P54257 671 aaPredicted RBP10.69□□□□□ -0.7
LSM8-202ENST00000411938 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
LSM8-202ENST00000411938 MARF1Q9Y4F3 1742 aaKnown RBP10.69□□□□□ -0.7
LSM8-202ENST00000411938 SLIT2O94813 1529 aa10.68□□□□□ -0.7
LSM8-202ENST00000411938 SPHKAPQ2M3C7 1700 aa10.68□□□□□ -0.7
LSM8-202ENST00000411938 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.68□□□□□ -0.7
LSM8-202ENST00000411938 VPS72Q15906 364 aa10.68□□□□□ -0.7
LSM8-202ENST00000411938 PXDNQ92626 1479 aa10.68□□□□□ -0.7
LSM8-202ENST00000411938 NUP155O75694 1391 aa10.67□□□□□ -0.7
LSM8-202ENST00000411938 LRPPRCP42704 1394 aaKnown RBP10.67□□□□□ -0.7
LSM8-202ENST00000411938 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
LSM8-202ENST00000411938 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
LSM8-202ENST00000411938 NUTM2FA1L443 756 aa10.66□□□□□ -0.7
LSM8-202ENST00000411938 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
LSM8-202ENST00000411938 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
LSM8-202ENST00000411938 SPATA31A3Q5VYP0 1347 aa10.64□□□□□ -0.71
LSM8-202ENST00000411938 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
LSM8-202ENST00000411938 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
LSM8-202ENST00000411938 CABLES1Q8TDN4 633 aa10.63□□□□□ -0.71
LSM8-202ENST00000411938 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
LSM8-202ENST00000411938 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
LSM8-202ENST00000411938 EZH2Q15910 746 aaKnown RBP10.62□□□□□ -0.71
LSM8-202ENST00000411938 PPP1R1BQ9UD71 204 aaPredicted RBP10.62□□□□□ -0.71
LSM8-202ENST00000411938 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 KRT28Q7Z3Y7 464 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
LSM8-202ENST00000411938 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
LSM8-202ENST00000411938 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
LSM8-202ENST00000411938 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
LSM8-202ENST00000411938 FAM83GA6ND36 823 aa10.59□□□□□ -0.71
LSM8-202ENST00000411938 NAIPQ13075 1403 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 PRAG1Q86YV5 1406 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 PSME1Q06323 249 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 STK26Q9P289 416 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
LSM8-202ENST00000411938 TRIM37O94972 964 aa10.57□□□□□ -0.72
LSM8-202ENST00000411938 WAPLQ7Z5K2 1190 aa10.57□□□□□ -0.72
LSM8-202ENST00000411938 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
LSM8-202ENST00000411938 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
LSM8-202ENST00000411938 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 ROCK1Q13464 1354 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 APBA3O96018 575 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 NBPF8Q3BBV2 869 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
LSM8-202ENST00000411938 CLTCL1P53675 1640 aa10.55□□□□□ -0.72
LSM8-202ENST00000411938 ITGAEP38570 1179 aa10.55□□□□□ -0.72
LSM8-202ENST00000411938 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
LSM8-202ENST00000411938 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
LSM8-202ENST00000411938 KCNQ2O43526 872 aa10.54□□□□□ -0.72
LSM8-202ENST00000411938 FAM196AQ6ZSG2 479 aa10.54□□□□□ -0.72
LSM8-202ENST00000411938 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
LSM8-202ENST00000411938 ARHGEF10O15013 1369 aa10.53□□□□□ -0.72
LSM8-202ENST00000411938 PARD3Q8TEW0 1356 aa10.53□□□□□ -0.72
LSM8-202ENST00000411938 SPATA31A5Q5VU36 1347 aa10.53□□□□□ -0.72
LSM8-202ENST00000411938 RPGRIP1LQ68CZ1 1315 aa10.53□□□□□ -0.72
LSM8-202ENST00000411938 SPATA31A7Q8IWB4 1347 aa10.53□□□□□ -0.72
LSM8-202ENST00000411938 ADGRB2O60241 1585 aa10.52□□□□□ -0.72
LSM8-202ENST00000411938 KIF1BO60333 1816 aa10.52□□□□□ -0.73
LSM8-202ENST00000411938 KIF1AQ12756 1690 aa10.52□□□□□ -0.73
LSM8-202ENST00000411938 TNS1Q9HBL0 1735 aaKnown RBP10.52□□□□□ -0.73
LSM8-202ENST00000411938 SBNO1A3KN83 1393 aa10.52□□□□□ -0.73
LSM8-202ENST00000411938 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
LSM8-202ENST00000411938 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
LSM8-202ENST00000411938 TMEM132EQ6IEE7 984 aa10.49□□□□□ -0.73
LSM8-202ENST00000411938 NRAPQ86VF7 1730 aa10.49□□□□□ -0.73
LSM8-202ENST00000411938 FMN2Q9NZ56 1722 aa10.49□□□□□ -0.73
LSM8-202ENST00000411938 ABCA3Q99758 1704 aa10.48□□□□□ -0.73
LSM8-202ENST00000411938 PDE3BQ13370 1112 aa10.48□□□□□ -0.73
LSM8-202ENST00000411938 PMFBP1Q8TBY8 1022 aa10.48□□□□□ -0.73
LSM8-202ENST00000411938 ABCC11Q96J66 1382 aa10.48□□□□□ -0.73
LSM8-202ENST00000411938 TECPR2O15040 1411 aa10.48□□□□□ -0.73
LSM8-202ENST00000411938 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
LSM8-202ENST00000411938 PRDM11Q9NQV5 511 aa10.47□□□□□ -0.73
LSM8-202ENST00000411938 ADGRF5Q8IZF2 1346 aa10.47□□□□□ -0.73
LSM8-202ENST00000411938 THSD7AQ9UPZ6 1657 aa10.47□□□□□ -0.73
LSM8-202ENST00000411938 STRN4Q9NRL3 753 aa10.46□□□□□ -0.73
LSM8-202ENST00000411938 USP35Q9P2H5 1018 aa10.46□□□□□ -0.73
LSM8-202ENST00000411938 SPATA31A1Q5TZJ5 1347 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms