RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 SKOR1P84550 965 aa4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 MAP2K5Q13163 448 aa4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 PTCRAQ6ISU1 281 aaPredicted RBP4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 TREML4Q6UXN2 200 aa4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 CCDC102AQ96A19 550 aa4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 GMPR2Q9P2T1 348 aaKnown RBP4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 SALL2Q9Y467 1007 aaPredicted RBP4.59□□□□□ -1.67
RNU2-55P-201ENST00000411146 KDM4AO75164 1064 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 CD2BP2O95400 341 aaKnown RBP4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 SMPD1P17405 629 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 MMP16P51512 607 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 SULF1Q8IWU6 871 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 PCDHGC3Q9UN70 934 aa4.58□□□□□ -1.68
RNU2-55P-201ENST00000411146 MSS51Q4VC12 460 aa4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 CYP4X1Q8N118 509 aa4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 CCDC24Q8N4L8 307 aa4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 MRGPRX2Q96LB1 330 aa4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 USB1Q9BQ65 265 aaKnown RBP4.57□□□□□ -1.68
RNU2-55P-201ENST00000411146 MINK1Q8N4C8 1332 aaPredicted RBP4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 HOXA2O43364 376 aa4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 DXOO77932 396 aaKnown RBP4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 NDUFV2P19404 249 aa4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 TRIM32Q13049 653 aa4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 HPS1Q92902 700 aa4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 FAM217BQ9NTX9 383 aaPredicted RBP4.56□□□□□ -1.68
RNU2-55P-201ENST00000411146 TTC24A2A3L6 582 aaPredicted RBP4.55□□□□□ -1.68
RNU2-55P-201ENST00000411146 SNRPBP14678 240 aaKnown RBP4.55□□□□□ -1.68
RNU2-55P-201ENST00000411146 SMCPP49901 116 aaPredicted RBP4.55□□□□□ -1.68
RNU2-55P-201ENST00000411146 VSIG10Q8N0Z9 540 aa4.55□□□□□ -1.68
RNU2-55P-201ENST00000411146 WNT7AO00755 349 aa4.54□□□□□ -1.68
RNU2-55P-201ENST00000411146 AXIN1O15169 862 aa4.54□□□□□ -1.68
RNU2-55P-201ENST00000411146 ZBTB24O43167 697 aaPredicted RBP4.54□□□□□ -1.68
RNU2-55P-201ENST00000411146 RC3H1Q5TC82 1133 aaKnown RBP4.54□□□□□ -1.68
RNU2-55P-201ENST00000411146 SSTR3P32745 418 aaPredicted RBP4.53□□□□□ -1.68
RNU2-55P-201ENST00000411146 NFX1Q12986 1120 aaKnown RBP4.53□□□□□ -1.68
RNU2-55P-201ENST00000411146 CTC1Q2NKJ3 1217 aa4.53□□□□□ -1.68
RNU2-55P-201ENST00000411146 MOXD2PA6NHM9 499 aa4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 C11orf95C9JLR9 678 aaPredicted RBP4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 Q3C1V9 767 aa4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 GRIPAP1Q4V328 841 aa4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 SNIP1Q8TAD8 396 aaKnown RBP4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 SPIRE2Q8WWL2 714 aa4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 GPCPD1Q9NPB8 672 aa4.52□□□□□ -1.69
RNU2-55P-201ENST00000411146 SIAH2O43255 324 aa4.51□□□□□ -1.69
RNU2-55P-201ENST00000411146 WFS1O76024 890 aa4.51□□□□□ -1.69
RNU2-55P-201ENST00000411146 ATP13A2Q9NQ11 1180 aa4.51□□□□□ -1.69
RNU2-55P-201ENST00000411146 PCDHB15Q9Y5E8 787 aa4.51□□□□□ -1.69
RNU2-55P-201ENST00000411146 FDX1P10109 184 aa4.5□□□□□ -1.69
RNU2-55P-201ENST00000411146 JUNDP17535 347 aa4.5□□□□□ -1.69
RNU2-55P-201ENST00000411146 USP46P62068 366 aa4.5□□□□□ -1.69
RNU2-55P-201ENST00000411146 BARGINQ6ZT62 677 aa4.5□□□□□ -1.69
RNU2-55P-201ENST00000411146 ZC3H15Q8WU90 426 aaKnown RBP4.5□□□□□ -1.69
RNU2-55P-201ENST00000411146 C6orf229H3BNL8 230 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 WIPF1O43516 503 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 ZMYND10O75800 440 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 ALDH1A1P00352 501 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 CLCN1P35523 988 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 SH3BP2P78314 561 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 LINC01559Q495D7 138 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 NUTM1Q86Y26 1132 aa4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 KRI1Q8N9T8 703 aaKnown RBP4.49□□□□□ -1.69
RNU2-55P-201ENST00000411146 BMP1P13497 986 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 TRIM46Q7Z4K8 759 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 RETREG3Q86VR2 466 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 BAP1Q92560 729 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 TRIM47Q96LD4 638 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 NUDT12Q9BQG2 462 aa4.48□□□□□ -1.69
RNU2-55P-201ENST00000411146 MS4A1P11836 297 aa4.47□□□□□ -1.69
RNU2-55P-201ENST00000411146 GIGYF2Q6Y7W6 1299 aaKnown RBP4.47□□□□□ -1.69
RNU2-55P-201ENST00000411146 PRR7Q8TB68 274 aa4.47□□□□□ -1.69
RNU2-55P-201ENST00000411146 TERTO14746 1132 aaKnown RBP4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 VEGFBP49765 207 aa4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 WNT7BP56706 349 aa4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 TTLL12Q14166 644 aaPredicted RBP4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 CABLES1Q8TDN4 633 aa4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 BEGAINQ9BUH8 593 aa4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 EVA1BQ9NVM1 165 aa4.46□□□□□ -1.7
RNU2-55P-201ENST00000411146 CFAP99D6REC4 459 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 TRIM66O15016 1216 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 PER1O15534 1290 aaPredicted RBP4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 AMHR2Q16671 573 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 PARP9Q8IXQ6 854 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 EHBP1Q8NDI1 1231 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 TBC1D2Q9BYX2 928 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 UNC93B1Q9H1C4 597 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 STK17AQ9UEE5 414 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 TLL2Q9Y6L7 1015 aa4.45□□□□□ -1.7
RNU2-55P-201ENST00000411146 SOBPA7XYQ1 873 aa4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 TULP1O00294 542 aaPredicted RBP4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 CCNYL3P0C7X3 344 aa4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 KCNH2Q12809 1159 aa4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 FOXJ1Q92949 421 aa4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 SENP2Q9HC62 589 aa4.44□□□□□ -1.7
RNU2-55P-201ENST00000411146 HRCP23327 699 aa4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 CSPP1Q1MSJ5 1256 aa4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 C4orf48Q5BLP8 95 aa4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 FBXO31Q5XUX0 539 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms