RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 NSD2O96028 1365 aa14.37□□□□□ -0.11
RN7SKP259-201ENST00000411066 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
RN7SKP259-201ENST00000411066 POGKQ9P215 609 aa14.37□□□□□ -0.11
RN7SKP259-201ENST00000411066 STK26Q9P289 416 aa14.37□□□□□ -0.11
RN7SKP259-201ENST00000411066 KNDC1Q76NI1 1749 aa14.36□□□□□ -0.11
RN7SKP259-201ENST00000411066 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
RN7SKP259-201ENST00000411066 TMEM2Q9UHN6 1383 aa14.35□□□□□ -0.11
RN7SKP259-201ENST00000411066 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
RN7SKP259-201ENST00000411066 PRAM1Q96QH2 718 aa14.35□□□□□ -0.11
RN7SKP259-201ENST00000411066 CGNL1Q0VF96 1302 aa14.35□□□□□ -0.11
RN7SKP259-201ENST00000411066 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
RN7SKP259-201ENST00000411066 POLR3AO14802 1390 aaPredicted RBP14.34□□□□□ -0.11
RN7SKP259-201ENST00000411066 TECPR2O15040 1411 aa14.33□□□□□ -0.11
RN7SKP259-201ENST00000411066 C3P01024 1663 aa14.33□□□□□ -0.11
RN7SKP259-201ENST00000411066 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
RN7SKP259-201ENST00000411066 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
RN7SKP259-201ENST00000411066 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
RN7SKP259-201ENST00000411066 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
RN7SKP259-201ENST00000411066 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
RN7SKP259-201ENST00000411066 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
RN7SKP259-201ENST00000411066 ADAMTS8Q9UP79 889 aa14.31□□□□□ -0.12
RN7SKP259-201ENST00000411066 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
RN7SKP259-201ENST00000411066 CPS1P31327 1500 aa14.31□□□□□ -0.12
RN7SKP259-201ENST00000411066 SAFB2Q14151 953 aaKnown RBP eCLIP14.3□□□□□ -0.12
RN7SKP259-201ENST00000411066 NGEFQ8N5V2 710 aa14.3□□□□□ -0.12
RN7SKP259-201ENST00000411066 TERF2IPQ9NYB0 399 aa14.3□□□□□ -0.12
RN7SKP259-201ENST00000411066 PLEKHG1Q9ULL1 1385 aa14.3□□□□□ -0.12
RN7SKP259-201ENST00000411066 MED14O60244 1454 aa14.3□□□□□ -0.12
RN7SKP259-201ENST00000411066 CDK19Q9BWU1 502 aa14.29□□□□□ -0.12
RN7SKP259-201ENST00000411066 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
RN7SKP259-201ENST00000411066 SLIT1O75093 1534 aa14.29□□□□□ -0.12
RN7SKP259-201ENST00000411066 A0A1W2PP64 1363 aa14.28□□□□□ -0.12
RN7SKP259-201ENST00000411066 METP08581 1390 aa14.28□□□□□ -0.12
RN7SKP259-201ENST00000411066 BCANQ96GW7 911 aa14.28□□□□□ -0.12
RN7SKP259-201ENST00000411066 ANKRD26Q9UPS8 1709 aa14.28□□□□□ -0.12
RN7SKP259-201ENST00000411066 ATP7BP35670 1465 aa14.27□□□□□ -0.12
RN7SKP259-201ENST00000411066 ADAMTS13Q76LX8 1427 aa14.27□□□□□ -0.12
RN7SKP259-201ENST00000411066 CD163L1Q9NR16 1453 aa14.26□□□□□ -0.13
RN7SKP259-201ENST00000411066 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP259-201ENST00000411066 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
RN7SKP259-201ENST00000411066 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
RN7SKP259-201ENST00000411066 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
RN7SKP259-201ENST00000411066 EID1Q9Y6B2 187 aa14.25□□□□□ -0.13
RN7SKP259-201ENST00000411066 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
RN7SKP259-201ENST00000411066 WAPLQ7Z5K2 1190 aa14.24□□□□□ -0.13
RN7SKP259-201ENST00000411066 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
RN7SKP259-201ENST00000411066 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
RN7SKP259-201ENST00000411066 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
RN7SKP259-201ENST00000411066 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
RN7SKP259-201ENST00000411066 WASLO00401 505 aaPredicted RBP14.23□□□□□ -0.13
RN7SKP259-201ENST00000411066 THEMISQ8N1K5 641 aaPredicted RBP14.23□□□□□ -0.13
RN7SKP259-201ENST00000411066 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
RN7SKP259-201ENST00000411066 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
RN7SKP259-201ENST00000411066 LTKP29376 864 aa14.22□□□□□ -0.13
RN7SKP259-201ENST00000411066 TXNDC2Q86VQ3 553 aa14.22□□□□□ -0.13
RN7SKP259-201ENST00000411066 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.13
RN7SKP259-201ENST00000411066 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
RN7SKP259-201ENST00000411066 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
RN7SKP259-201ENST00000411066 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
RN7SKP259-201ENST00000411066 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.13
RN7SKP259-201ENST00000411066 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
RN7SKP259-201ENST00000411066 MTHFSP49914 203 aa14.2□□□□□ -0.14
RN7SKP259-201ENST00000411066 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
RN7SKP259-201ENST00000411066 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
RN7SKP259-201ENST00000411066 FYB1O15117 783 aa14.19□□□□□ -0.14
RN7SKP259-201ENST00000411066 CDC42BPGQ6DT37 1551 aa14.18□□□□□ -0.14
RN7SKP259-201ENST00000411066 EDC4Q6P2E9 1401 aaKnown RBP14.18□□□□□ -0.14
RN7SKP259-201ENST00000411066 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
RN7SKP259-201ENST00000411066 CDCA7LQ96GN5 454 aa14.18□□□□□ -0.14
RN7SKP259-201ENST00000411066 RIMS1Q86UR5 1692 aaKnown RBP14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 CEP170BQ9Y4F5 1589 aaPredicted RBP14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
RN7SKP259-201ENST00000411066 PTCH1Q13635 1447 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 MON2Q7Z3U7 1717 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 APAF1O14727 1248 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 RUNDC1Q96C34 613 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 NUDT16Q96DE0 195 aaKnown RBP14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 GGNBP2Q9H3C7 697 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 AKAP12Q02952 1782 aa14.16□□□□□ -0.14
RN7SKP259-201ENST00000411066 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 ZNF142P52746 1687 aaPredicted RBP14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 SLFN5Q08AF3 891 aa14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 CCDC146Q8IYE0 955 aa14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 ITSN1Q15811 1721 aa14.15□□□□□ -0.14
RN7SKP259-201ENST00000411066 COL3A1P02461 1466 aaPredicted RBP14.14□□□□□ -0.15
RN7SKP259-201ENST00000411066 IQSEC2Q5JU85 1478 aa14.14□□□□□ -0.15
RN7SKP259-201ENST00000411066 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
RN7SKP259-201ENST00000411066 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
RN7SKP259-201ENST00000411066 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
RN7SKP259-201ENST00000411066 E9PSI1 815 aa14.13□□□□□ -0.15
RN7SKP259-201ENST00000411066 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms