RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PTPN23Q9H3S7 1636 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 MYOM2P54296 1465 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 RALGAPBQ86X10 1494 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 EP400Q96L91 3159 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 DCAF8L1A6NGE4 600 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 YY1P25490 414 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 VPS72Q15906 364 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 ROBO2Q9HCK4 1378 aa3.63□□□□□ -1.83
RNU4-53P-201ENST00000410828 NHSL1Q5SYE7 1610 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 HFM1A2PYH4 1435 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 NUTM2FA1L443 756 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 EN1Q05925 392 aaPredicted RBP3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 PSME1Q06323 249 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 R3HDM1Q15032 1099 aaKnown RBP3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 KRT28Q7Z3Y7 464 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 SPATA31A3Q5VYP0 1347 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 RPGRIP1LQ68CZ1 1315 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 ROCK1Q13464 1354 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 GCC2Q8IWJ2 1684 aa3.62□□□□□ -1.83
RNU4-53P-201ENST00000410828 SLIT2O94813 1529 aa3.61□□□□□ -1.83
RNU4-53P-201ENST00000410828 UNC13BO14795 1591 aa3.61□□□□□ -1.83
RNU4-53P-201ENST00000410828 CROCC2H7BZ55 1655 aa3.61□□□□□ -1.83
RNU4-53P-201ENST00000410828 XRN1Q8IZH2 1706 aaKnown RBP3.61□□□□□ -1.83
RNU4-53P-201ENST00000410828 PXDNQ92626 1479 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 FAM83GA6ND36 823 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 PLEKHG5O94827 1062 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 ITGAEP38570 1179 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 FAM98CQ17RN3 349 aaKnown RBP3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 LMOD2Q6P5Q4 547 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 WAPLQ7Z5K2 1190 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 CABLES1Q8TDN4 633 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 STK26Q9P289 416 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 PPP1R1BQ9UD71 204 aaPredicted RBP3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 CCDC144AA2RUR9 1427 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 PRAG1Q86YV5 1406 aa3.6□□□□□ -1.83
RNU4-53P-201ENST00000410828 LRP5O75197 1615 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 LAMC1P11047 1609 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 MYO5BQ9ULV0 1848 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 APBA3O96018 575 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 EZH2Q15910 746 aaKnown RBP3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 NBPF8Q3BBV2 869 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 FAM182BQ5T319 152 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 NBPF14Q5TI25 921 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 FAM196AQ6ZSG2 479 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 CAMKK2Q96RR4 588 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 SPON1Q9HCB6 807 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 BTG4Q9NY30 223 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 PHF8Q9UPP1 1060 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 ARHGEF10O15013 1369 aa3.59□□□□□ -1.83
RNU4-53P-201ENST00000410828 NAIPQ13075 1403 aa3.59□□□□□ -1.84
RNU4-53P-201ENST00000410828 GLI3P10071 1580 aa3.59□□□□□ -1.84
RNU4-53P-201ENST00000410828 COL22A1Q8NFW1 1626 aaPredicted RBP3.59□□□□□ -1.84
RNU4-53P-201ENST00000410828 NRXN3Q9Y4C0 1643 aa3.59□□□□□ -1.84
RNU4-53P-201ENST00000410828 E9PCH4 1651 aa3.59□□□□□ -1.84
RNU4-53P-201ENST00000410828 TRIM37O94972 964 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 SIRT1Q96EB6 747 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 SPATA31A5Q5VU36 1347 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 SPATA31A7Q8IWB4 1347 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 SBNO1A3KN83 1393 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 PARD3Q8TEW0 1356 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 ABCC11Q96J66 1382 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 DISP2A7MBM2 1401 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 TNS3Q68CZ2 1445 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 NEXMIFQ5QGS0 1516 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 IQGAP3Q86VI3 1631 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 NALCNQ8IZF0 1738 aa3.58□□□□□ -1.84
RNU4-53P-201ENST00000410828 TECPR2O15040 1411 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 KCNQ2O43526 872 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 RGL3Q3MIN7 710 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 IFFO2Q5TF58 517 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 CDC42BPGQ6DT37 1551 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 TMEM132EQ6IEE7 984 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 ADGRF5Q8IZF2 1346 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 PMFBP1Q8TBY8 1022 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 SLC4A1APQ9BWU0 796 aaKnown RBP3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 PRDM11Q9NQV5 511 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 PLEKHH1Q9ULM0 1364 aa3.57□□□□□ -1.84
RNU4-53P-201ENST00000410828 GPRASP1Q5JY77 1395 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 NINLQ9Y2I6 1382 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 SPATA31A1Q5TZJ5 1347 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 SENP3-EIF4A1A0A087X0R7 540 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 C11orf95C9JLR9 678 aaPredicted RBP3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 EVA1CP58658 441 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 PDE3BQ13370 1112 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 ZNF784Q8NCA9 323 aaPredicted RBP3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 STRN4Q9NRL3 753 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 SPHKAPQ2M3C7 1700 aa3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.56□□□□□ -1.84
RNU4-53P-201ENST00000410828 USP32Q8NFA0 1604 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 ANKRD30BQ9BXX2 1392 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 PAK3O75914 559 aaPredicted RBP3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 C1QTNF8P60827 252 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 SAFB2Q14151 953 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 BARGINQ6ZT62 677 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 PRAM1Q96QH2 718 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 C14orf93Q9H972 538 aaKnown RBP3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 POGKQ9P215 609 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 USP35Q9P2H5 1018 aa3.55□□□□□ -1.84
RNU4-53P-201ENST00000410828 NRXN1Q9ULB1 1477 aa3.54□□□□□ -1.84
RNU4-53P-201ENST00000410828 ANKARQ7Z5J8 1434 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms