RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-208ENST00000410007 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
PBRM1-208ENST00000410007 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.63
PBRM1-208ENST00000410007 H3BQV1 296 aa11.14□□□□□ -0.63
PBRM1-208ENST00000410007 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
PBRM1-208ENST00000410007 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
PBRM1-208ENST00000410007 PHF14O94880 888 aa11.14□□□□□ -0.63
PBRM1-208ENST00000410007 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
PBRM1-208ENST00000410007 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 PRKAR2BP31323 418 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 RTEL1-TNFRSF6BF6WH68 1400 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 ERC2O15083 957 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 CD109Q6YHK3 1445 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 CCDC30Q5VVM6 783 aa11.13□□□□□ -0.63
PBRM1-208ENST00000410007 CDK13Q14004 1512 aaKnown RBP11.13□□□□□ -0.63
PBRM1-208ENST00000410007 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 ATAD2Q6PL18 1390 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 UBTFL1P0CB47 393 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-208ENST00000410007 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
PBRM1-208ENST00000410007 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 CUL7Q14999 1698 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
PBRM1-208ENST00000410007 SLC26A8Q96RN1 970 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
PBRM1-208ENST00000410007 GNAI3P08754 354 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 TRDNQ13061 729 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 NBPF8Q3BBV2 869 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 APPP05067 770 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 GOLGA6L3A6NEY3 463 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
PBRM1-208ENST00000410007 DEKP35659 375 aaKnown RBP11.1□□□□□ -0.63
PBRM1-208ENST00000410007 RBM33Q96EV2 1170 aaKnown RBP11.1□□□□□ -0.63
PBRM1-208ENST00000410007 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
PBRM1-208ENST00000410007 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
PBRM1-208ENST00000410007 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
PBRM1-208ENST00000410007 INTS3Q68E01 1043 aaKnown RBP11.09□□□□□ -0.63
PBRM1-208ENST00000410007 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
PBRM1-208ENST00000410007 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
PBRM1-208ENST00000410007 CPLX1O14810 134 aa11.09□□□□□ -0.63
PBRM1-208ENST00000410007 TRIM29Q14134 588 aa11.09□□□□□ -0.63
PBRM1-208ENST00000410007 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
PBRM1-208ENST00000410007 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 SULT6B1Q6IMI4 303 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 PLB1Q6P1J6 1458 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 NAIPQ13075 1403 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 FOXD4L5Q5VV16 416 aaPredicted RBP11.08□□□□□ -0.64
PBRM1-208ENST00000410007 FOXD4L4Q8WXT5 416 aaPredicted RBP11.08□□□□□ -0.64
PBRM1-208ENST00000410007 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
PBRM1-208ENST00000410007 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
PBRM1-208ENST00000410007 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
PBRM1-208ENST00000410007 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
PBRM1-208ENST00000410007 ADGRL1O94910 1474 aa11.07□□□□□ -0.64
PBRM1-208ENST00000410007 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 CLASRPQ8N2M8 674 aaKnown RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 SPG7Q9UQ90 795 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 CTDP1Q9Y5B0 961 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 ERICH2A1L162 156 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 PRDM11Q9NQV5 511 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
PBRM1-208ENST00000410007 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
PBRM1-208ENST00000410007 CAMSAP2Q08AD1 1489 aa11.05□□□□□ -0.64
PBRM1-208ENST00000410007 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-208ENST00000410007 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
PBRM1-208ENST00000410007 KIF14Q15058 1648 aa11.05□□□□□ -0.64
PBRM1-208ENST00000410007 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
PBRM1-208ENST00000410007 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 RAD21O60216 631 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 PCF11O94913 1555 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 CABP4P57796 275 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 SURF6O75683 361 aaKnown RBP11.04□□□□□ -0.64
PBRM1-208ENST00000410007 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
PBRM1-208ENST00000410007 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 PDE3AQ14432 1141 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 TPD52L1Q16890 204 aaPredicted RBP11.03□□□□□ -0.64
PBRM1-208ENST00000410007 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 CDC45O75419 566 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 KCNH5Q8NCM2 988 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 ERC1Q8IUD2 1116 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
PBRM1-208ENST00000410007 ABCC5O15440 1437 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms