RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 LMTK3Q96Q04 1460 aa31.46■■■□□ 2.63
PMS1-205ENST00000409985 WDR43Q15061 677 aaKnown RBP eCLIP31.45■■■□□ 2.63
PMS1-205ENST00000409985 TMEM2Q9UHN6 1383 aa31.45■■■□□ 2.62
PMS1-205ENST00000409985 ARHGAP23Q9P227 1491 aa31.42■■■□□ 2.62
PMS1-205ENST00000409985 CDCA7LQ96GN5 454 aa31.42■■■□□ 2.62
PMS1-205ENST00000409985 SENP3-EIF4A1A0A087X0R7 540 aa31.42■■■□□ 2.62
PMS1-205ENST00000409985 NGEFQ8N5V2 710 aa31.42■■■□□ 2.62
PMS1-205ENST00000409985 RIMS2Q9UQ26 1411 aa31.41■■■□□ 2.62
PMS1-205ENST00000409985 SLIT1O75093 1534 aa31.41■■■□□ 2.62
PMS1-205ENST00000409985 LTKP29376 864 aa31.4■■■□□ 2.62
PMS1-205ENST00000409985 THEMISQ8N1K5 641 aaPredicted RBP31.4■■■□□ 2.62
PMS1-205ENST00000409985 ZNF521Q96K83 1311 aa31.4■■■□□ 2.62
PMS1-205ENST00000409985 SALL2Q9Y467 1007 aaPredicted RBP31.39■■■□□ 2.62
PMS1-205ENST00000409985 HSPA2P54652 639 aa31.38■■■□□ 2.61
PMS1-205ENST00000409985 EXOC6Q8TAG9 804 aa31.38■■■□□ 2.61
PMS1-205ENST00000409985 C14orf93Q9H972 538 aaKnown RBP31.37■■■□□ 2.61
PMS1-205ENST00000409985 SENP3Q9H4L4 574 aaPredicted RBP31.36■■■□□ 2.61
PMS1-205ENST00000409985 PUS7Q96PZ0 661 aaKnown RBP31.34■■■□□ 2.61
PMS1-205ENST00000409985 ADGRB1O14514 1584 aa31.34■■■□□ 2.61
PMS1-205ENST00000409985 CENPJQ9HC77 1338 aaPredicted RBP31.34■■■□□ 2.61
PMS1-205ENST00000409985 TCERG1O14776 1098 aaKnown RBP31.33■■■□□ 2.61
PMS1-205ENST00000409985 PLEKHH1Q9ULM0 1364 aa31.31■■■□□ 2.6
PMS1-205ENST00000409985 TXNDC2Q86VQ3 553 aa31.3■■■□□ 2.6
PMS1-205ENST00000409985 GOLGA2Q08379 1002 aa31.29■■■□□ 2.6
PMS1-205ENST00000409985 ERICH6Q7L0X2 663 aa31.29■■■□□ 2.6
PMS1-205ENST00000409985 USP32Q8NFA0 1604 aa31.28■■■□□ 2.6
PMS1-205ENST00000409985 VGFO15240 615 aaPredicted RBP31.28■■■□□ 2.6
PMS1-205ENST00000409985 DUSP27Q5VZP5 1158 aa31.28■■■□□ 2.6
PMS1-205ENST00000409985 MS4A1P11836 297 aa31.27■■■□□ 2.6
PMS1-205ENST00000409985 QRICH2Q9H0J4 1663 aa31.27■■■□□ 2.6
PMS1-205ENST00000409985 POLR3AO14802 1390 aaPredicted RBP31.27■■■□□ 2.6
PMS1-205ENST00000409985 NRXN3Q9Y4C0 1643 aa31.26■■■□□ 2.59
PMS1-205ENST00000409985 TRMT2AQ8IZ69 625 aaKnown RBP31.26■■■□□ 2.59
PMS1-205ENST00000409985 CARD14Q9BXL6 1004 aa31.26■■■□□ 2.59
PMS1-205ENST00000409985 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.24■■■□□ 2.59
PMS1-205ENST00000409985 NCKAP5LQ9HCH0 1330 aa31.23■■■□□ 2.59
PMS1-205ENST00000409985 SLFN5Q08AF3 891 aa31.22■■■□□ 2.59
PMS1-205ENST00000409985 ANKLE2Q86XL3 938 aa31.21■■■□□ 2.59
PMS1-205ENST00000409985 EID1Q9Y6B2 187 aa31.21■■■□□ 2.59
PMS1-205ENST00000409985 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.21■■■□□ 2.59
PMS1-205ENST00000409985 PLEKHG1Q9ULL1 1385 aa31.2■■■□□ 2.59
PMS1-205ENST00000409985 STRCQ7RTU9 1775 aa31.2■■■□□ 2.58
PMS1-205ENST00000409985 HDGFP51858 240 aaKnown RBP31.18■■■□□ 2.58
PMS1-205ENST00000409985 ADAMTS13Q76LX8 1427 aa31.18■■■□□ 2.58
PMS1-205ENST00000409985 ANP32AP39687 249 aaKnown RBP31.17■■■□□ 2.58
PMS1-205ENST00000409985 SETD1AO15047 1707 aaKnown RBP31.17■■■□□ 2.58
PMS1-205ENST00000409985 ALKQ9UM73 1620 aa31.15■■■□□ 2.58
PMS1-205ENST00000409985 CRBNQ96SW2 442 aa31.15■■■□□ 2.58
PMS1-205ENST00000409985 MED14O60244 1454 aa31.15■■■□□ 2.58
PMS1-205ENST00000409985 NKTRP30414 1462 aaKnown RBP31.12■■■□□ 2.57
PMS1-205ENST00000409985 SLC26A8Q96RN1 970 aa31.12■■■□□ 2.57
PMS1-205ENST00000409985 E9PSI1 815 aa31.12■■■□□ 2.57
PMS1-205ENST00000409985 TRAK1Q9UPV9 953 aa31.12■■■□□ 2.57
PMS1-205ENST00000409985 NOP58Q9Y2X3 529 aaKnown RBP31.12■■■□□ 2.57
PMS1-205ENST00000409985 NSD3Q9BZ95 1437 aa31.11■■■□□ 2.57
PMS1-205ENST00000409985 ARHGEF28Q8N1W1 1705 aaKnown RBP31.11■■■□□ 2.57
PMS1-205ENST00000409985 PLIN1O60240 522 aa31.11■■■□□ 2.57
PMS1-205ENST00000409985 NSD2O96028 1365 aa31.1■■■□□ 2.57
PMS1-205ENST00000409985 IPO9Q96P70 1041 aaKnown RBP31.1■■■□□ 2.57
PMS1-205ENST00000409985 NPHP4O75161 1426 aaPredicted RBP31.1■■■□□ 2.57
PMS1-205ENST00000409985 NCBP3Q53F19 620 aaKnown RBP31.1■■■□□ 2.57
PMS1-205ENST00000409985 TMEM132EQ6IEE7 984 aa31.1■■■□□ 2.57
PMS1-205ENST00000409985 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
PMS1-205ENST00000409985 METP08581 1390 aa31.09■■■□□ 2.57
PMS1-205ENST00000409985 APAF1O14727 1248 aa31.07■■■□□ 2.56
PMS1-205ENST00000409985 EVC2Q86UK5 1308 aa31.07■■■□□ 2.56
PMS1-205ENST00000409985 SHPRHQ149N8 1683 aa31.06■■■□□ 2.56
PMS1-205ENST00000409985 NINLQ9Y2I6 1382 aa31.06■■■□□ 2.56
PMS1-205ENST00000409985 MORC1Q86VD1 984 aa31.05■■■□□ 2.56
PMS1-205ENST00000409985 KDM2BQ8NHM5 1336 aa31.04■■■□□ 2.56
PMS1-205ENST00000409985 ANKRD36BQ8N2N9 1353 aa31.04■■■□□ 2.56
PMS1-205ENST00000409985 CGNL1Q0VF96 1302 aa31.04■■■□□ 2.56
PMS1-205ENST00000409985 BACH2Q9BYV9 841 aa31.04■■■□□ 2.56
PMS1-205ENST00000409985 CENPQQ7L2Z9 268 aaPredicted RBP31.03■■■□□ 2.56
PMS1-205ENST00000409985 PDE4AP27815 886 aa31.02■■■□□ 2.56
PMS1-205ENST00000409985 TULP4Q9NRJ4 1543 aa31.02■■■□□ 2.56
PMS1-205ENST00000409985 CCDC146Q8IYE0 955 aa31.01■■■□□ 2.56
PMS1-205ENST00000409985 TBX22Q9Y458 520 aa31.01■■■□□ 2.56
PMS1-205ENST00000409985 SLC12A5Q9H2X9 1139 aa31.01■■■□□ 2.55
PMS1-205ENST00000409985 PTPRUQ92729 1446 aa30.99■■■□□ 2.55
PMS1-205ENST00000409985 C20orf194Q5TEA3 1177 aa30.99■■■□□ 2.55
PMS1-205ENST00000409985 DIP2AQ14689 1571 aa30.97■■■□□ 2.55
PMS1-205ENST00000409985 RUNDC1Q96C34 613 aa30.96■■■□□ 2.55
PMS1-205ENST00000409985 IQSEC2Q5JU85 1478 aa30.95■■■□□ 2.55
PMS1-205ENST00000409985 CFAP53Q96M91 514 aa30.94■■■□□ 2.54
PMS1-205ENST00000409985 PHF23Q9BUL5 403 aaPredicted RBP30.94■■■□□ 2.54
PMS1-205ENST00000409985 ZBTB47Q9UFB7 747 aaPredicted RBP30.93■■■□□ 2.54
PMS1-205ENST00000409985 YTHDC2Q9H6S0 1430 aaKnown RBP30.93■■■□□ 2.54
PMS1-205ENST00000409985 CCDC27Q2M243 656 aa30.93■■■□□ 2.54
PMS1-205ENST00000409985 WWC1Q8IX03 1113 aa30.93■■■□□ 2.54
PMS1-205ENST00000409985 SPINK5Q9NQ38 1064 aaPredicted RBP30.92■■■□□ 2.54
PMS1-205ENST00000409985 STK26Q9P289 416 aa30.92■■■□□ 2.54
PMS1-205ENST00000409985 PDE3AQ14432 1141 aa30.91■■■□□ 2.54
PMS1-205ENST00000409985 WDR63Q8IWG1 891 aa30.9■■■□□ 2.54
PMS1-205ENST00000409985 CHD2O14647 1828 aaKnown RBP30.89■■■□□ 2.54
PMS1-205ENST00000409985 AAMPQ13685 434 aa30.87■■■□□ 2.53
PMS1-205ENST00000409985 ATAD2Q6PL18 1390 aa30.87■■■□□ 2.53
PMS1-205ENST00000409985 ABCC11Q96J66 1382 aa30.87■■■□□ 2.53
PMS1-205ENST00000409985 STRCP1A6NGW2 1772 aa30.86■■■□□ 2.53
PMS1-205ENST00000409985 XRN1Q8IZH2 1706 aaKnown RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms