RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
GYPC-203ENST00000409836 COL16A1Q07092 1604 aaPredicted RBP20.17■□□□□ 0.82
GYPC-203ENST00000409836 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
GYPC-203ENST00000409836 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
GYPC-203ENST00000409836 ATF3P18847 181 aa20.16■□□□□ 0.82
GYPC-203ENST00000409836 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
GYPC-203ENST00000409836 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
GYPC-203ENST00000409836 STK26Q9P289 416 aa20.15■□□□□ 0.82
GYPC-203ENST00000409836 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
GYPC-203ENST00000409836 KIF1AQ12756 1690 aa20.15■□□□□ 0.82
GYPC-203ENST00000409836 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
GYPC-203ENST00000409836 PHLPP1O60346 1717 aa20.15■□□□□ 0.82
GYPC-203ENST00000409836 WAPLQ7Z5K2 1190 aa20.13■□□□□ 0.81
GYPC-203ENST00000409836 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
GYPC-203ENST00000409836 PIP4K2BP78356 416 aa20.12■□□□□ 0.81
GYPC-203ENST00000409836 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
GYPC-203ENST00000409836 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
GYPC-203ENST00000409836 TULP4Q9NRJ4 1543 aa20.12■□□□□ 0.81
GYPC-203ENST00000409836 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
GYPC-203ENST00000409836 ITSN1Q15811 1721 aa20.1■□□□□ 0.81
GYPC-203ENST00000409836 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
GYPC-203ENST00000409836 TOPAZ1Q8N9V7 1692 aa20.1■□□□□ 0.81
GYPC-203ENST00000409836 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
GYPC-203ENST00000409836 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
GYPC-203ENST00000409836 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
GYPC-203ENST00000409836 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
GYPC-203ENST00000409836 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.81
GYPC-203ENST00000409836 HSPA1LP34931 641 aa20.08■□□□□ 0.81
GYPC-203ENST00000409836 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
GYPC-203ENST00000409836 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
GYPC-203ENST00000409836 ATP7BP35670 1465 aa20.06■□□□□ 0.8
GYPC-203ENST00000409836 POGKQ9P215 609 aa20.04■□□□□ 0.8
GYPC-203ENST00000409836 PXDNQ92626 1479 aa20.03■□□□□ 0.8
GYPC-203ENST00000409836 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
GYPC-203ENST00000409836 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.79
GYPC-203ENST00000409836 COL22A1Q8NFW1 1626 aaPredicted RBP20.01■□□□□ 0.79
GYPC-203ENST00000409836 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
GYPC-203ENST00000409836 WASLO00401 505 aaPredicted RBP19.98■□□□□ 0.79
GYPC-203ENST00000409836 TRPM3Q9HCF6 1732 aaPredicted RBP19.98■□□□□ 0.79
GYPC-203ENST00000409836 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
GYPC-203ENST00000409836 MINK1Q8N4C8 1332 aaPredicted RBP19.98■□□□□ 0.79
GYPC-203ENST00000409836 JCADQ9P266 1359 aa19.97■□□□□ 0.79
GYPC-203ENST00000409836 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.791e-7■■■□□ 18.5
GYPC-203ENST00000409836 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
GYPC-203ENST00000409836 PRR36Q9H6K5 1346 aa19.96■□□□□ 0.79
GYPC-203ENST00000409836 NPHP3Q7Z494 1330 aa19.95■□□□□ 0.78
GYPC-203ENST00000409836 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
GYPC-203ENST00000409836 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
GYPC-203ENST00000409836 ALS2Q96Q42 1657 aa19.93■□□□□ 0.78
GYPC-203ENST00000409836 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
GYPC-203ENST00000409836 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
GYPC-203ENST00000409836 PNPLA6Q8IY17 1366 aa19.91■□□□□ 0.78
GYPC-203ENST00000409836 ABCA3Q99758 1704 aa19.9■□□□□ 0.78
GYPC-203ENST00000409836 SPATA31A6Q5VVP1 1343 aa19.89■□□□□ 0.77
GYPC-203ENST00000409836 USP47Q96K76 1375 aa19.89■□□□□ 0.77
GYPC-203ENST00000409836 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
GYPC-203ENST00000409836 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
GYPC-203ENST00000409836 SBNO1A3KN83 1393 aa19.88■□□□□ 0.77
GYPC-203ENST00000409836 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
GYPC-203ENST00000409836 LRP6O75581 1613 aa19.87■□□□□ 0.77
GYPC-203ENST00000409836 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
GYPC-203ENST00000409836 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
GYPC-203ENST00000409836 CDK19Q9BWU1 502 aa19.87■□□□□ 0.77
GYPC-203ENST00000409836 TNS3Q68CZ2 1445 aa19.86■□□□□ 0.77
GYPC-203ENST00000409836 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
GYPC-203ENST00000409836 NRKQ7Z2Y5 1582 aa19.86■□□□□ 0.77
GYPC-203ENST00000409836 MARF1Q9Y4F3 1742 aaKnown RBP19.85■□□□□ 0.77
GYPC-203ENST00000409836 DDX17Q92841 729 aaKnown RBP19.85■□□□□ 0.77
GYPC-203ENST00000409836 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
GYPC-203ENST00000409836 TESK2Q96S53 571 aa19.85■□□□□ 0.77
GYPC-203ENST00000409836 CCDC61Q9Y6R9 512 aa19.85■□□□□ 0.77
GYPC-203ENST00000409836 ATAD2Q6PL18 1390 aa19.84■□□□□ 0.77
GYPC-203ENST00000409836 PLEKHG3A1L390 1219 aa19.84■□□□□ 0.77
GYPC-203ENST00000409836 FOXO3O43524 673 aa19.84■□□□□ 0.77
GYPC-203ENST00000409836 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
GYPC-203ENST00000409836 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
GYPC-203ENST00000409836 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
GYPC-203ENST00000409836 BRD4O60885 1362 aaPredicted RBP19.83■□□□□ 0.76
GYPC-203ENST00000409836 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
GYPC-203ENST00000409836 SLC24A1O60721 1099 aa19.82■□□□□ 0.76
GYPC-203ENST00000409836 ARHGEF10O15013 1369 aa19.8■□□□□ 0.76
GYPC-203ENST00000409836 CPSF1Q10570 1443 aaKnown RBP19.79■□□□□ 0.76
GYPC-203ENST00000409836 USP54Q70EL1 1684 aa19.79■□□□□ 0.76
GYPC-203ENST00000409836 NINLQ9Y2I6 1382 aa19.79■□□□□ 0.76
GYPC-203ENST00000409836 MYOM1P52179 1685 aa19.78■□□□□ 0.76
GYPC-203ENST00000409836 SSH2Q76I76 1423 aa19.78■□□□□ 0.76
GYPC-203ENST00000409836 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
GYPC-203ENST00000409836 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
GYPC-203ENST00000409836 USP6P35125 1406 aa19.77■□□□□ 0.76
GYPC-203ENST00000409836 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
GYPC-203ENST00000409836 CABP2Q9NPB3 220 aa19.77■□□□□ 0.76
GYPC-203ENST00000409836 CD163L1Q9NR16 1453 aa19.77■□□□□ 0.76
GYPC-203ENST00000409836 PHRF1Q9P1Y6 1649 aaKnown RBP19.76■□□□□ 0.75
GYPC-203ENST00000409836 PSME1Q06323 249 aa19.76■□□□□ 0.75
GYPC-203ENST00000409836 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
GYPC-203ENST00000409836 ACEP12821 1306 aa19.75■□□□□ 0.75
GYPC-203ENST00000409836 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
GYPC-203ENST00000409836 DISP3Q9P2K9 1392 aa19.74■□□□□ 0.75
GYPC-203ENST00000409836 XPCQ01831 940 aaPredicted RBP19.74■□□□□ 0.75
GYPC-203ENST00000409836 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms