RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
LIMS2-206ENST00000409754 AMOTL2Q9Y2J4 779 aa19.29■□□□□ 0.68
LIMS2-206ENST00000409754 NALCNQ8IZF0 1738 aa19.29■□□□□ 0.68
LIMS2-206ENST00000409754 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
LIMS2-206ENST00000409754 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
LIMS2-206ENST00000409754 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
LIMS2-206ENST00000409754 YTHDC2Q9H6S0 1430 aaKnown RBP19.28■□□□□ 0.68
LIMS2-206ENST00000409754 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
LIMS2-206ENST00000409754 LRPPRCP42704 1394 aaKnown RBP19.27■□□□□ 0.68
LIMS2-206ENST00000409754 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
LIMS2-206ENST00000409754 ARHGEF28Q8N1W1 1705 aaKnown RBP19.27■□□□□ 0.67
LIMS2-206ENST00000409754 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-206ENST00000409754 PER1O15534 1290 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-206ENST00000409754 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-206ENST00000409754 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
LIMS2-206ENST00000409754 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
LIMS2-206ENST00000409754 RALBP1Q15311 655 aa19.23■□□□□ 0.67
LIMS2-206ENST00000409754 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
LIMS2-206ENST00000409754 DLC1Q96QB1 1528 aa19.23■□□□□ 0.67
LIMS2-206ENST00000409754 CCDC184Q52MB2 194 aa19.22■□□□□ 0.67
LIMS2-206ENST00000409754 PANK3Q9H999 370 aa19.22■□□□□ 0.67
LIMS2-206ENST00000409754 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
LIMS2-206ENST00000409754 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
LIMS2-206ENST00000409754 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
LIMS2-206ENST00000409754 STK26Q9P289 416 aa19.21■□□□□ 0.67
LIMS2-206ENST00000409754 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
LIMS2-206ENST00000409754 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
LIMS2-206ENST00000409754 MYOM1P52179 1685 aa19.18■□□□□ 0.66
LIMS2-206ENST00000409754 ADGRL3Q9HAR2 1447 aa19.18■□□□□ 0.66
LIMS2-206ENST00000409754 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
LIMS2-206ENST00000409754 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
LIMS2-206ENST00000409754 MYBBP1AQ9BQG0 1328 aaKnown RBP19.17■□□□□ 0.66
LIMS2-206ENST00000409754 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
LIMS2-206ENST00000409754 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.66
LIMS2-206ENST00000409754 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
LIMS2-206ENST00000409754 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
LIMS2-206ENST00000409754 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
LIMS2-206ENST00000409754 GTF3C3Q9Y5Q9 886 aa19.14■□□□□ 0.65
LIMS2-206ENST00000409754 ADGRB2O60241 1585 aa19.13■□□□□ 0.65
LIMS2-206ENST00000409754 KNSTRNQ9Y448 316 aa19.12■□□□□ 0.65
LIMS2-206ENST00000409754 SIRT1Q96EB6 747 aa19.11■□□□□ 0.65
LIMS2-206ENST00000409754 PRAM1Q96QH2 718 aa19.11■□□□□ 0.65
LIMS2-206ENST00000409754 DCCP43146 1447 aa19.11■□□□□ 0.65
LIMS2-206ENST00000409754 NPC1L1Q9UHC9 1359 aa19.11■□□□□ 0.65
LIMS2-206ENST00000409754 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
LIMS2-206ENST00000409754 FMN2Q9NZ56 1722 aa19.1■□□□□ 0.65
LIMS2-206ENST00000409754 MSH6P52701 1360 aa19.1■□□□□ 0.65
LIMS2-206ENST00000409754 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
LIMS2-206ENST00000409754 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
LIMS2-206ENST00000409754 EVC2Q86UK5 1308 aa19.09■□□□□ 0.65
LIMS2-206ENST00000409754 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
LIMS2-206ENST00000409754 MST1RQ04912 1400 aa19.09■□□□□ 0.65
LIMS2-206ENST00000409754 USP32Q8NFA0 1604 aa19.08■□□□□ 0.65
LIMS2-206ENST00000409754 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.65
LIMS2-206ENST00000409754 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.64
LIMS2-206ENST00000409754 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
LIMS2-206ENST00000409754 CC2D1BQ5T0F9 858 aaKnown RBP19.07■□□□□ 0.64
LIMS2-206ENST00000409754 ROBO1Q9Y6N7 1651 aa19.07■□□□□ 0.64
LIMS2-206ENST00000409754 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
LIMS2-206ENST00000409754 PNISRQ8TF01 805 aaKnown RBP19.07■□□□□ 0.64
LIMS2-206ENST00000409754 C19orf44Q9H6X5 657 aa19.07■□□□□ 0.64
LIMS2-206ENST00000409754 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
LIMS2-206ENST00000409754 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
LIMS2-206ENST00000409754 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
LIMS2-206ENST00000409754 POGKQ9P215 609 aa19.03■□□□□ 0.64
LIMS2-206ENST00000409754 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
LIMS2-206ENST00000409754 C1orf167Q5SNV9 1468 aa19.02■□□□□ 0.63
LIMS2-206ENST00000409754 CARD14Q9BXL6 1004 aa19.01■□□□□ 0.63
LIMS2-206ENST00000409754 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
LIMS2-206ENST00000409754 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
LIMS2-206ENST00000409754 TOM1O60784 492 aa19■□□□□ 0.63
LIMS2-206ENST00000409754 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
LIMS2-206ENST00000409754 TOPAZ1Q8N9V7 1692 aa18.99■□□□□ 0.63
LIMS2-206ENST00000409754 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
LIMS2-206ENST00000409754 SLAIN2Q9P270 581 aa18.99■□□□□ 0.63
LIMS2-206ENST00000409754 ATAD2Q6PL18 1390 aa18.98■□□□□ 0.63
LIMS2-206ENST00000409754 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
LIMS2-206ENST00000409754 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
LIMS2-206ENST00000409754 NHSL1Q5SYE7 1610 aa18.98■□□□□ 0.63
LIMS2-206ENST00000409754 ATP7BP35670 1465 aa18.98■□□□□ 0.63
LIMS2-206ENST00000409754 ATF3P18847 181 aa18.97■□□□□ 0.63
LIMS2-206ENST00000409754 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-206ENST00000409754 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
LIMS2-206ENST00000409754 ANKRD36BQ8N2N9 1353 aa18.97■□□□□ 0.63
LIMS2-206ENST00000409754 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
LIMS2-206ENST00000409754 NSD3Q9BZ95 1437 aa18.96■□□□□ 0.63
LIMS2-206ENST00000409754 INSRP06213 1382 aa18.96■□□□□ 0.63
LIMS2-206ENST00000409754 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
LIMS2-206ENST00000409754 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
LIMS2-206ENST00000409754 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
LIMS2-206ENST00000409754 BRINP3Q76B58 766 aa18.95■□□□□ 0.62
LIMS2-206ENST00000409754 COL16A1Q07092 1604 aaPredicted RBP18.94■□□□□ 0.62
LIMS2-206ENST00000409754 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
LIMS2-206ENST00000409754 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
LIMS2-206ENST00000409754 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
LIMS2-206ENST00000409754 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
LIMS2-206ENST00000409754 PHLPP1O60346 1717 aa18.91■□□□□ 0.62
LIMS2-206ENST00000409754 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
LIMS2-206ENST00000409754 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
LIMS2-206ENST00000409754 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms