RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CENPJQ9HC77 1338 aaPredicted RBP23.5■■□□□ 1.35
SUMO1-208ENST00000409627 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
SUMO1-208ENST00000409627 CDC42BPGQ6DT37 1551 aa23.47■■□□□ 1.35
SUMO1-208ENST00000409627 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
SUMO1-208ENST00000409627 DCCP43146 1447 aa23.45■■□□□ 1.34
SUMO1-208ENST00000409627 SAFB2Q14151 953 aaKnown RBP eCLIP23.45■■□□□ 1.34
SUMO1-208ENST00000409627 MSH6P52701 1360 aa23.44■■□□□ 1.34
SUMO1-208ENST00000409627 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
SUMO1-208ENST00000409627 C14orf37Q86TY3 774 aa23.43■■□□□ 1.34
SUMO1-208ENST00000409627 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
SUMO1-208ENST00000409627 ST20-MTHFSA0A0A6YYL1 179 aa23.42■■□□□ 1.34
SUMO1-208ENST00000409627 CERKQ8TCT0 537 aa23.42■■□□□ 1.34
SUMO1-208ENST00000409627 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
SUMO1-208ENST00000409627 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
SUMO1-208ENST00000409627 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
SUMO1-208ENST00000409627 TULP4Q9NRJ4 1543 aa23.38■■□□□ 1.33
SUMO1-208ENST00000409627 TESK2Q96S53 571 aa23.37■■□□□ 1.33
SUMO1-208ENST00000409627 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
SUMO1-208ENST00000409627 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
SUMO1-208ENST00000409627 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
SUMO1-208ENST00000409627 WASLO00401 505 aaPredicted RBP23.34■■□□□ 1.33
SUMO1-208ENST00000409627 ATF3P18847 181 aa23.34■■□□□ 1.33
SUMO1-208ENST00000409627 USP32Q8NFA0 1604 aa23.33■■□□□ 1.32
SUMO1-208ENST00000409627 MST1RQ04912 1400 aa23.33■■□□□ 1.32
SUMO1-208ENST00000409627 EVC2Q86UK5 1308 aa23.33■■□□□ 1.32
SUMO1-208ENST00000409627 ANKARQ7Z5J8 1434 aa23.32■■□□□ 1.32
SUMO1-208ENST00000409627 RGPD8O14715 1765 aaPredicted RBP23.31■■□□□ 1.32
SUMO1-208ENST00000409627 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
SUMO1-208ENST00000409627 TOPAZ1Q8N9V7 1692 aa23.29■■□□□ 1.32
SUMO1-208ENST00000409627 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
SUMO1-208ENST00000409627 ATP7BP35670 1465 aa23.29■■□□□ 1.32
SUMO1-208ENST00000409627 TMF1P82094 1093 aa23.28■■□□□ 1.32
SUMO1-208ENST00000409627 C1orf167Q5SNV9 1468 aa23.28■■□□□ 1.32
SUMO1-208ENST00000409627 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
SUMO1-208ENST00000409627 TOM1O60784 492 aa23.26■■□□□ 1.31
SUMO1-208ENST00000409627 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
SUMO1-208ENST00000409627 PUS7Q96PZ0 661 aaKnown RBP23.25■■□□□ 1.31
SUMO1-208ENST00000409627 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
SUMO1-208ENST00000409627 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
SUMO1-208ENST00000409627 PRR36Q9H6K5 1346 aa23.24■■□□□ 1.31
SUMO1-208ENST00000409627 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
SUMO1-208ENST00000409627 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
SUMO1-208ENST00000409627 CABP2Q9NPB3 220 aa23.23■■□□□ 1.31
SUMO1-208ENST00000409627 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
SUMO1-208ENST00000409627 ROBO1Q9Y6N7 1651 aa23.22■■□□□ 1.31
SUMO1-208ENST00000409627 NUTM2FA1L443 756 aa23.22■■□□□ 1.31
SUMO1-208ENST00000409627 NUDT16Q96DE0 195 aaKnown RBP23.22■■□□□ 1.31
SUMO1-208ENST00000409627 MYOM1P52179 1685 aa23.19■■□□□ 1.3
SUMO1-208ENST00000409627 CCDC61Q9Y6R9 512 aa23.18■■□□□ 1.3
SUMO1-208ENST00000409627 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
SUMO1-208ENST00000409627 NHSL1Q5SYE7 1610 aa23.16■■□□□ 1.3
SUMO1-208ENST00000409627 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
SUMO1-208ENST00000409627 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
SUMO1-208ENST00000409627 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
SUMO1-208ENST00000409627 NINLQ9Y2I6 1382 aa23.15■■□□□ 1.3
SUMO1-208ENST00000409627 C11orf95C9JLR9 678 aaPredicted RBP23.15■■□□□ 1.3
SUMO1-208ENST00000409627 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
SUMO1-208ENST00000409627 AKAP12Q02952 1782 aa23.14■■□□□ 1.29
SUMO1-208ENST00000409627 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
SUMO1-208ENST00000409627 PLEKHG3A1L390 1219 aa23.13■■□□□ 1.29
SUMO1-208ENST00000409627 AHDC1Q5TGY3 1603 aaPredicted RBP23.12■■□□□ 1.29
SUMO1-208ENST00000409627 PIP4K2BP78356 416 aa23.12■■□□□ 1.29
SUMO1-208ENST00000409627 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
SUMO1-208ENST00000409627 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
SUMO1-208ENST00000409627 CABP1Q9NZU7 370 aa23.1■■□□□ 1.29
SUMO1-208ENST00000409627 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
SUMO1-208ENST00000409627 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
SUMO1-208ENST00000409627 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
SUMO1-208ENST00000409627 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
SUMO1-208ENST00000409627 CD163L1Q9NR16 1453 aa23.08■■□□□ 1.29
SUMO1-208ENST00000409627 PHLPP1O60346 1717 aa23.08■■□□□ 1.28
SUMO1-208ENST00000409627 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
SUMO1-208ENST00000409627 POLR3GLQ9BT43 218 aa23.07■■□□□ 1.28
SUMO1-208ENST00000409627 SLC12A5Q9H2X9 1139 aa23.07■■□□□ 1.28
SUMO1-208ENST00000409627 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
SUMO1-208ENST00000409627 ACEP12821 1306 aa23.07■■□□□ 1.28
SUMO1-208ENST00000409627 NPHP3Q7Z494 1330 aa23.07■■□□□ 1.28
SUMO1-208ENST00000409627 FBXO41Q8TF61 875 aa23.06■■□□□ 1.28
SUMO1-208ENST00000409627 PXDNQ92626 1479 aa23.05■■□□□ 1.28
SUMO1-208ENST00000409627 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
SUMO1-208ENST00000409627 NRKQ7Z2Y5 1582 aa23.05■■□□□ 1.28
SUMO1-208ENST00000409627 TRPM3Q9HCF6 1732 aaPredicted RBP23.05■■□□□ 1.28
SUMO1-208ENST00000409627 ANKRD36BQ8N2N9 1353 aa23.04■■□□□ 1.28
SUMO1-208ENST00000409627 FOXO3O43524 673 aa23.04■■□□□ 1.28
SUMO1-208ENST00000409627 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
SUMO1-208ENST00000409627 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
SUMO1-208ENST00000409627 USP6P35125 1406 aa23.02■■□□□ 1.28
SUMO1-208ENST00000409627 ZNF692Q9BU19 519 aaPredicted RBP23.02■■□□□ 1.28
SUMO1-208ENST00000409627 TERF2IPQ9NYB0 399 aa23.02■■□□□ 1.28
SUMO1-208ENST00000409627 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
SUMO1-208ENST00000409627 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
SUMO1-208ENST00000409627 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
SUMO1-208ENST00000409627 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
SUMO1-208ENST00000409627 BRD4O60885 1362 aaPredicted RBP23.01■■□□□ 1.27
SUMO1-208ENST00000409627 PSME1Q06323 249 aa23■■□□□ 1.27
SUMO1-208ENST00000409627 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
SUMO1-208ENST00000409627 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
SUMO1-208ENST00000409627 ALS2Q96Q42 1657 aa22.98■■□□□ 1.27
SUMO1-208ENST00000409627 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
SUMO1-208ENST00000409627 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms