RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MBD5Q9P267 1494 aa14.61□□□□□ -0.07
SNX13-202ENST00000409604 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
SNX13-202ENST00000409604 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
SNX13-202ENST00000409604 TSR2Q969E8 191 aaKnown RBP14.61□□□□□ -0.07
SNX13-202ENST00000409604 NSD3Q9BZ95 1437 aa14.61□□□□□ -0.07
SNX13-202ENST00000409604 MSH5O43196 834 aa14.6□□□□□ -0.07
SNX13-202ENST00000409604 DCTN1Q14203 1278 aa14.6□□□□□ -0.07
SNX13-202ENST00000409604 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
SNX13-202ENST00000409604 STK31Q9BXU1 1019 aa14.6□□□□□ -0.07
SNX13-202ENST00000409604 ARHGEF12Q9NZN5 1544 aa14.6□□□□□ -0.07
SNX13-202ENST00000409604 HSP90AA1P07900 732 aaKnown RBP14.6□□□□□ -0.07
SNX13-202ENST00000409604 PZPP20742 1482 aa14.59□□□□□ -0.07
SNX13-202ENST00000409604 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
SNX13-202ENST00000409604 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
SNX13-202ENST00000409604 COG6Q9Y2V7 657 aa14.58□□□□□ -0.07
SNX13-202ENST00000409604 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.07
SNX13-202ENST00000409604 ACEP12821 1306 aa14.58□□□□□ -0.08
SNX13-202ENST00000409604 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.08
SNX13-202ENST00000409604 ANP32AP39687 249 aaKnown RBP14.58□□□□□ -0.08
SNX13-202ENST00000409604 ATP10AO60312 1499 aa14.57□□□□□ -0.08
SNX13-202ENST00000409604 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
SNX13-202ENST00000409604 UBAP1LF5GYI3 381 aa14.57□□□□□ -0.08
SNX13-202ENST00000409604 ORAI2Q96SN7 254 aa14.56□□□□□ -0.08
SNX13-202ENST00000409604 KDM6BO15054 1643 aa14.56□□□□□ -0.08
SNX13-202ENST00000409604 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
SNX13-202ENST00000409604 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
SNX13-202ENST00000409604 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
SNX13-202ENST00000409604 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
SNX13-202ENST00000409604 PPP4R2Q9NY27 417 aa14.55□□□□□ -0.08
SNX13-202ENST00000409604 KRT28Q7Z3Y7 464 aa14.55□□□□□ -0.08
SNX13-202ENST00000409604 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
SNX13-202ENST00000409604 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
SNX13-202ENST00000409604 PNISRQ8TF01 805 aaKnown RBP14.54□□□□□ -0.08
SNX13-202ENST00000409604 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
SNX13-202ENST00000409604 EXOC6Q8TAG9 804 aa14.54□□□□□ -0.08
SNX13-202ENST00000409604 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
SNX13-202ENST00000409604 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
SNX13-202ENST00000409604 NPATQ14207 1427 aa14.53□□□□□ -0.08
SNX13-202ENST00000409604 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
SNX13-202ENST00000409604 SAMD9LQ8IVG5 1584 aa14.53□□□□□ -0.08
SNX13-202ENST00000409604 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.08
SNX13-202ENST00000409604 TESK2Q96S53 571 aa14.52□□□□□ -0.08
SNX13-202ENST00000409604 GTF2E1P29083 439 aaPredicted RBP14.52□□□□□ -0.09
SNX13-202ENST00000409604 CALD1Q05682 793 aaKnown RBP14.52□□□□□ -0.09
SNX13-202ENST00000409604 MCM10Q7L590 875 aa14.51□□□□□ -0.09
SNX13-202ENST00000409604 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
SNX13-202ENST00000409604 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
SNX13-202ENST00000409604 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
SNX13-202ENST00000409604 IPO8O15397 1037 aaKnown RBP14.5□□□□□ -0.09
SNX13-202ENST00000409604 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
SNX13-202ENST00000409604 PANK1Q8TE04 598 aa14.5□□□□□ -0.09
SNX13-202ENST00000409604 CARD14Q9BXL6 1004 aa14.49□□□□□ -0.09
SNX13-202ENST00000409604 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
SNX13-202ENST00000409604 FYB1O15117 783 aa14.49□□□□□ -0.09
SNX13-202ENST00000409604 FKBP5Q13451 457 aaPredicted RBP14.49□□□□□ -0.09
SNX13-202ENST00000409604 CRBNQ96SW2 442 aa14.49□□□□□ -0.09
SNX13-202ENST00000409604 PRAG1Q86YV5 1406 aa14.49□□□□□ -0.09
SNX13-202ENST00000409604 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
SNX13-202ENST00000409604 PTCD1O75127 700 aaKnown RBP14.48□□□□□ -0.09
SNX13-202ENST00000409604 E9PSI1 815 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 NEO1Q92859 1461 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 SCAF11Q99590 1463 aaKnown RBP14.47□□□□□ -0.09
SNX13-202ENST00000409604 BCAR3O75815 825 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 ZBED9Q6R2W3 1325 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
SNX13-202ENST00000409604 FAM83GA6ND36 823 aa14.46□□□□□ -0.09
SNX13-202ENST00000409604 ADCY10Q96PN6 1610 aa14.46□□□□□ -0.09
SNX13-202ENST00000409604 PLEKHH1Q9ULM0 1364 aa14.45□□□□□ -0.1
SNX13-202ENST00000409604 LRRC59Q96AG4 307 aaKnown RBP14.45□□□□□ -0.1
SNX13-202ENST00000409604 SHANK2Q9UPX8 1470 aa14.45□□□□□ -0.1
SNX13-202ENST00000409604 MPRIPQ6WCQ1 1025 aa14.45□□□□□ -0.1
SNX13-202ENST00000409604 MYO5CQ9NQX4 1742 aa14.45□□□□□ -0.1
SNX13-202ENST00000409604 ZFYVE16Q7Z3T8 1539 aa14.45□□□□□ -0.1
SNX13-202ENST00000409604 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
SNX13-202ENST00000409604 NBR1Q14596 966 aa14.44□□□□□ -0.1
SNX13-202ENST00000409604 AEBP1Q8IUX7 1158 aa14.44□□□□□ -0.1
SNX13-202ENST00000409604 TATP17735 454 aaPredicted RBP14.43□□□□□ -0.1
SNX13-202ENST00000409604 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
SNX13-202ENST00000409604 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
SNX13-202ENST00000409604 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
SNX13-202ENST00000409604 MYL6BP14649 208 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
SNX13-202ENST00000409604 MS4A1P11836 297 aa14.41□□□□□ -0.1
SNX13-202ENST00000409604 TBX22Q9Y458 520 aa14.41□□□□□ -0.1
SNX13-202ENST00000409604 ADGRL2O95490 1459 aa14.41□□□□□ -0.1
SNX13-202ENST00000409604 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
SNX13-202ENST00000409604 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
SNX13-202ENST00000409604 PLEKHO1Q53GL0 409 aaPredicted RBP14.41□□□□□ -0.1
SNX13-202ENST00000409604 C8orf37Q96NL8 207 aa14.41□□□□□ -0.1
SNX13-202ENST00000409604 DMRT2Q9Y5R5 561 aa14.4□□□□□ -0.1
SNX13-202ENST00000409604 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
SNX13-202ENST00000409604 ZKSCAN2Q63HK3 967 aa14.4□□□□□ -0.1
SNX13-202ENST00000409604 MSH6P52701 1360 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms