RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
PMS1-203ENST00000409593 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
PMS1-203ENST00000409593 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
PMS1-203ENST00000409593 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
PMS1-203ENST00000409593 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
PMS1-203ENST00000409593 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
PMS1-203ENST00000409593 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
PMS1-203ENST00000409593 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
PMS1-203ENST00000409593 ATP1B4Q9UN42 357 aaPredicted RBP9.37□□□□□ -0.91
PMS1-203ENST00000409593 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
PMS1-203ENST00000409593 PRDM9Q9NQV7 894 aa9.36□□□□□ -0.91
PMS1-203ENST00000409593 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
PMS1-203ENST00000409593 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
PMS1-203ENST00000409593 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
PMS1-203ENST00000409593 LIMD1Q9UGP4 676 aa9.36□□□□□ -0.91
PMS1-203ENST00000409593 SPTLC1O15269 473 aa9.35□□□□□ -0.91
PMS1-203ENST00000409593 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
PMS1-203ENST00000409593 PCDHB15Q9Y5E8 787 aa9.34□□□□□ -0.91
PMS1-203ENST00000409593 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
PMS1-203ENST00000409593 GJA5P36382 358 aa9.33□□□□□ -0.92
PMS1-203ENST00000409593 MTMR2Q13614 643 aa9.33□□□□□ -0.92
PMS1-203ENST00000409593 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
PMS1-203ENST00000409593 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
PMS1-203ENST00000409593 SH3D19Q5HYK7 790 aa9.32□□□□□ -0.92
PMS1-203ENST00000409593 RETREG3Q86VR2 466 aa9.32□□□□□ -0.92
PMS1-203ENST00000409593 CABLES1Q8TDN4 633 aa9.32□□□□□ -0.92
PMS1-203ENST00000409593 ZBTB3Q9H5J0 574 aa9.32□□□□□ -0.92
PMS1-203ENST00000409593 NUTM2BA6NNL0 878 aaPredicted RBP9.3□□□□□ -0.92
PMS1-203ENST00000409593 NUTM2EB1AL46 878 aaPredicted RBP9.3□□□□□ -0.92
PMS1-203ENST00000409593 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
PMS1-203ENST00000409593 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
PMS1-203ENST00000409593 NUTM2AQ8IVF1 878 aaPredicted RBP9.3□□□□□ -0.92
PMS1-203ENST00000409593 HRCP23327 699 aa9.29□□□□□ -0.92
PMS1-203ENST00000409593 QPCTQ16769 361 aa9.29□□□□□ -0.92
PMS1-203ENST00000409593 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
PMS1-203ENST00000409593 PRPF38BQ5VTL8 546 aaKnown RBP9.29□□□□□ -0.92
PMS1-203ENST00000409593 ANKLE1Q8NAG6 615 aa9.29□□□□□ -0.92
PMS1-203ENST00000409593 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
PMS1-203ENST00000409593 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
PMS1-203ENST00000409593 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
PMS1-203ENST00000409593 TSC1Q92574 1164 aa9.28□□□□□ -0.92
PMS1-203ENST00000409593 JUNDP17535 347 aa9.27□□□□□ -0.93
PMS1-203ENST00000409593 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
PMS1-203ENST00000409593 MMP16P51512 607 aa9.26□□□□□ -0.93
PMS1-203ENST00000409593 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
PMS1-203ENST00000409593 LILRB3O75022 631 aa9.26□□□□□ -0.93
PMS1-203ENST00000409593 PCMTD1Q96MG8 357 aaPredicted RBP9.26□□□□□ -0.93
PMS1-203ENST00000409593 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
PMS1-203ENST00000409593 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
PMS1-203ENST00000409593 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
PMS1-203ENST00000409593 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
PMS1-203ENST00000409593 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
PMS1-203ENST00000409593 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
PMS1-203ENST00000409593 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
PMS1-203ENST00000409593 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
PMS1-203ENST00000409593 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
PMS1-203ENST00000409593 SLC19A1P41440 591 aa9.2□□□□□ -0.94
PMS1-203ENST00000409593 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
PMS1-203ENST00000409593 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
PMS1-203ENST00000409593 PTPRNQ16849 979 aa9.2□□□□□ -0.94
PMS1-203ENST00000409593 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
PMS1-203ENST00000409593 V9GY48 417 aaPredicted RBP9.2□□□□□ -0.94
PMS1-203ENST00000409593 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
PMS1-203ENST00000409593 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
PMS1-203ENST00000409593 EMID1Q96A84 441 aaPredicted RBP9.19□□□□□ -0.94
PMS1-203ENST00000409593 CTHP32929 405 aa9.17□□□□□ -0.94
PMS1-203ENST00000409593 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
PMS1-203ENST00000409593 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
PMS1-203ENST00000409593 LYPD8Q6UX82 237 aa9.16□□□□□ -0.94
PMS1-203ENST00000409593 AP1G2O75843 785 aa9.16□□□□□ -0.94
PMS1-203ENST00000409593 RFC5P40937 340 aa9.16□□□□□ -0.94
PMS1-203ENST00000409593 SPRYD7Q5W111 196 aa9.16□□□□□ -0.94
PMS1-203ENST00000409593 RPIAP49247 311 aa9.15□□□□□ -0.94
PMS1-203ENST00000409593 CTDSPL2Q05D32 466 aa9.14□□□□□ -0.95
PMS1-203ENST00000409593 TRIM32Q13049 653 aa9.14□□□□□ -0.95
PMS1-203ENST00000409593 ZNF697Q5TEC3 545 aa9.14□□□□□ -0.95
PMS1-203ENST00000409593 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
PMS1-203ENST00000409593 PTCRAQ6ISU1 281 aaPredicted RBP9.13□□□□□ -0.95
PMS1-203ENST00000409593 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
PMS1-203ENST00000409593 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
PMS1-203ENST00000409593 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
PMS1-203ENST00000409593 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
PMS1-203ENST00000409593 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
PMS1-203ENST00000409593 Q6ZNB5 142 aa9.11□□□□□ -0.95
PMS1-203ENST00000409593 LRRN4Q8WUT4 740 aa9.11□□□□□ -0.95
PMS1-203ENST00000409593 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
PMS1-203ENST00000409593 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
PMS1-203ENST00000409593 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
PMS1-203ENST00000409593 FOXC1Q12948 553 aa9.09□□□□□ -0.95
PMS1-203ENST00000409593 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
PMS1-203ENST00000409593 TNFRSF10AO00220 468 aa9.07□□□□□ -0.96
PMS1-203ENST00000409593 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
PMS1-203ENST00000409593 BAP1Q92560 729 aa9.06□□□□□ -0.96
PMS1-203ENST00000409593 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
PMS1-203ENST00000409593 NR6A1Q15406 480 aa9.05□□□□□ -0.96
PMS1-203ENST00000409593 HMX1Q9NP08 348 aaPredicted RBP9.05□□□□□ -0.96
PMS1-203ENST00000409593 GFRA3O60609 400 aa9.04□□□□□ -0.96
PMS1-203ENST00000409593 WNT7BP56706 349 aa9.04□□□□□ -0.96
PMS1-203ENST00000409593 SKOR1P84550 965 aa9.04□□□□□ -0.96
PMS1-203ENST00000409593 SH3BP2P78314 561 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms