RNA–Protein interactions for RNA: ENST00000409529.6

CCDC138-202, Transcript of coiled-coil domain containing 138, humanhuman

TSL 2

Gene CCDC138, Length 2,364 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-202ENST00000409529 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
CCDC138-202ENST00000409529 ERICH6Q7L0X2 663 aa17.22■□□□□ 0.35
CCDC138-202ENST00000409529 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
CCDC138-202ENST00000409529 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
CCDC138-202ENST00000409529 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
CCDC138-202ENST00000409529 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
CCDC138-202ENST00000409529 MTHFSP49914 203 aa17.22■□□□□ 0.35
CCDC138-202ENST00000409529 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
CCDC138-202ENST00000409529 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
CCDC138-202ENST00000409529 BCAR3O75815 825 aa17.2■□□□□ 0.34
CCDC138-202ENST00000409529 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
CCDC138-202ENST00000409529 MLECQ14165 292 aa17.2■□□□□ 0.34
CCDC138-202ENST00000409529 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
CCDC138-202ENST00000409529 PREX1Q8TCU6 1659 aa17.19■□□□□ 0.34
CCDC138-202ENST00000409529 PRAM1Q96QH2 718 aa17.18■□□□□ 0.34
CCDC138-202ENST00000409529 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
CCDC138-202ENST00000409529 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
CCDC138-202ENST00000409529 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
CCDC138-202ENST00000409529 RIMBP3CA6NJZ7 1639 aa17.17■□□□□ 0.34
CCDC138-202ENST00000409529 RIMBP3BA6NNM3 1639 aa17.17■□□□□ 0.34
CCDC138-202ENST00000409529 RIMBP3Q9UFD9 1639 aa17.17■□□□□ 0.34
CCDC138-202ENST00000409529 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
CCDC138-202ENST00000409529 E9PSI1 815 aa17.16■□□□□ 0.34
CCDC138-202ENST00000409529 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
CCDC138-202ENST00000409529 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
CCDC138-202ENST00000409529 NKTRP30414 1462 aaKnown RBP17.16■□□□□ 0.34
CCDC138-202ENST00000409529 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
CCDC138-202ENST00000409529 POGKQ9P215 609 aa17.15■□□□□ 0.34
CCDC138-202ENST00000409529 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
CCDC138-202ENST00000409529 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
CCDC138-202ENST00000409529 ZFYVE9O95405 1425 aa17.14■□□□□ 0.33
CCDC138-202ENST00000409529 PDE4AP27815 886 aa17.14■□□□□ 0.33
CCDC138-202ENST00000409529 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
CCDC138-202ENST00000409529 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
CCDC138-202ENST00000409529 A0A1W2PP64 1363 aa17.14■□□□□ 0.33
CCDC138-202ENST00000409529 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
CCDC138-202ENST00000409529 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
CCDC138-202ENST00000409529 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
CCDC138-202ENST00000409529 PUS7Q96PZ0 661 aaKnown RBP17.12■□□□□ 0.33
CCDC138-202ENST00000409529 PTPRMP28827 1452 aa17.12■□□□□ 0.33
CCDC138-202ENST00000409529 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
CCDC138-202ENST00000409529 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
CCDC138-202ENST00000409529 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
CCDC138-202ENST00000409529 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC138-202ENST00000409529 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
CCDC138-202ENST00000409529 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
CCDC138-202ENST00000409529 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
CCDC138-202ENST00000409529 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
CCDC138-202ENST00000409529 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
CCDC138-202ENST00000409529 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.33
CCDC138-202ENST00000409529 CDK19Q9BWU1 502 aa17.08■□□□□ 0.33
CCDC138-202ENST00000409529 ALKQ9UM73 1620 aa17.08■□□□□ 0.32
CCDC138-202ENST00000409529 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
CCDC138-202ENST00000409529 FYB1O15117 783 aa17.07■□□□□ 0.32
CCDC138-202ENST00000409529 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
CCDC138-202ENST00000409529 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
CCDC138-202ENST00000409529 MS4A1P11836 297 aa17.07■□□□□ 0.32
CCDC138-202ENST00000409529 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
CCDC138-202ENST00000409529 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
CCDC138-202ENST00000409529 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
CCDC138-202ENST00000409529 IQSEC2Q5JU85 1478 aa17.06■□□□□ 0.32
CCDC138-202ENST00000409529 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
CCDC138-202ENST00000409529 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
CCDC138-202ENST00000409529 NSD2O96028 1365 aa17.05■□□□□ 0.32
CCDC138-202ENST00000409529 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
CCDC138-202ENST00000409529 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
CCDC138-202ENST00000409529 FBLN1P23142 703 aa17.04■□□□□ 0.32
CCDC138-202ENST00000409529 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
CCDC138-202ENST00000409529 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
CCDC138-202ENST00000409529 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
CCDC138-202ENST00000409529 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
CCDC138-202ENST00000409529 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
CCDC138-202ENST00000409529 A2ML1A8K2U0 1454 aa17.03■□□□□ 0.32
CCDC138-202ENST00000409529 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
CCDC138-202ENST00000409529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC138-202ENST00000409529 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
CCDC138-202ENST00000409529 RGS3P49796 1198 aa17.02■□□□□ 0.31
CCDC138-202ENST00000409529 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
CCDC138-202ENST00000409529 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
CCDC138-202ENST00000409529 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
CCDC138-202ENST00000409529 IGHDP01880 384 aa17.01■□□□□ 0.31
CCDC138-202ENST00000409529 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
CCDC138-202ENST00000409529 NBR1Q14596 966 aa17■□□□□ 0.31
CCDC138-202ENST00000409529 HDGFL2Q7Z4V5 671 aaPredicted RBP17■□□□□ 0.31
CCDC138-202ENST00000409529 AGLP35573 1532 aa17■□□□□ 0.31
CCDC138-202ENST00000409529 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
CCDC138-202ENST00000409529 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
CCDC138-202ENST00000409529 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
CCDC138-202ENST00000409529 NLRP1Q9C000 1473 aa16.99■□□□□ 0.31
CCDC138-202ENST00000409529 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
CCDC138-202ENST00000409529 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
CCDC138-202ENST00000409529 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
CCDC138-202ENST00000409529 RLBP1P12271 317 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 SPATA31D1Q6ZQQ2 1576 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 REREQ9P2R6 1566 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 TXNDC2Q86VQ3 553 aa16.97■□□□□ 0.31
CCDC138-202ENST00000409529 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
CCDC138-202ENST00000409529 METP08581 1390 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms