RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
CUL1-202ENST00000409469 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
CUL1-202ENST00000409469 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
CUL1-202ENST00000409469 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
CUL1-202ENST00000409469 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
CUL1-202ENST00000409469 ARHGEF28Q8N1W1 1705 aaKnown RBP13.31□□□□□ -0.28
CUL1-202ENST00000409469 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
CUL1-202ENST00000409469 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 WAPLQ7Z5K2 1190 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 SBNO2Q9Y2G9 1366 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 UBE2Q2Q8WVN8 375 aa13.3□□□□□ -0.28
CUL1-202ENST00000409469 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
CUL1-202ENST00000409469 POGKQ9P215 609 aa13.29□□□□□ -0.28
CUL1-202ENST00000409469 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
CUL1-202ENST00000409469 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.28
CUL1-202ENST00000409469 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.28
CUL1-202ENST00000409469 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.28
CUL1-202ENST00000409469 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.28
CUL1-202ENST00000409469 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
CUL1-202ENST00000409469 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
CUL1-202ENST00000409469 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
CUL1-202ENST00000409469 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
CUL1-202ENST00000409469 PTPRMP28827 1452 aa13.26□□□□□ -0.29
CUL1-202ENST00000409469 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
CUL1-202ENST00000409469 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
CUL1-202ENST00000409469 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
CUL1-202ENST00000409469 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
CUL1-202ENST00000409469 PDE4CQ08493 712 aa13.23□□□□□ -0.29
CUL1-202ENST00000409469 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
CUL1-202ENST00000409469 METP08581 1390 aa13.23□□□□□ -0.29
CUL1-202ENST00000409469 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
CUL1-202ENST00000409469 TNRQ92752 1358 aa13.23□□□□□ -0.29
CUL1-202ENST00000409469 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
CUL1-202ENST00000409469 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
CUL1-202ENST00000409469 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CUL1-202ENST00000409469 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
CUL1-202ENST00000409469 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
CUL1-202ENST00000409469 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.3
CUL1-202ENST00000409469 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
CUL1-202ENST00000409469 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
CUL1-202ENST00000409469 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
CUL1-202ENST00000409469 FBLN1P23142 703 aa13.2□□□□□ -0.3
CUL1-202ENST00000409469 APAF1O14727 1248 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 LTKP29376 864 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 MTHFSP49914 203 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
CUL1-202ENST00000409469 PLIN1O60240 522 aa13.18□□□□□ -0.3
CUL1-202ENST00000409469 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
CUL1-202ENST00000409469 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
CUL1-202ENST00000409469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.34e-6■■□□□ 11.9
CUL1-202ENST00000409469 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
CUL1-202ENST00000409469 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
CUL1-202ENST00000409469 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
CUL1-202ENST00000409469 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
CUL1-202ENST00000409469 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
CUL1-202ENST00000409469 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
CUL1-202ENST00000409469 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
CUL1-202ENST00000409469 CD163L1Q9NR16 1453 aa13.15□□□□□ -0.3
CUL1-202ENST00000409469 FYB1O15117 783 aa13.14□□□□□ -0.31
CUL1-202ENST00000409469 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
CUL1-202ENST00000409469 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
CUL1-202ENST00000409469 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
CUL1-202ENST00000409469 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
CUL1-202ENST00000409469 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
CUL1-202ENST00000409469 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
CUL1-202ENST00000409469 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
CUL1-202ENST00000409469 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
CUL1-202ENST00000409469 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
CUL1-202ENST00000409469 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
CUL1-202ENST00000409469 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
CUL1-202ENST00000409469 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
CUL1-202ENST00000409469 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
CUL1-202ENST00000409469 C3P01024 1663 aa13.11□□□□□ -0.31
CUL1-202ENST00000409469 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
CUL1-202ENST00000409469 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
CUL1-202ENST00000409469 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
CUL1-202ENST00000409469 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
CUL1-202ENST00000409469 PUS7Q96PZ0 661 aaKnown RBP13.1□□□□□ -0.31
CUL1-202ENST00000409469 ADAMTS13Q76LX8 1427 aa13.1□□□□□ -0.31
CUL1-202ENST00000409469 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
CUL1-202ENST00000409469 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
CUL1-202ENST00000409469 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
CUL1-202ENST00000409469 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
CUL1-202ENST00000409469 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
CUL1-202ENST00000409469 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.31
CUL1-202ENST00000409469 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
CUL1-202ENST00000409469 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
CUL1-202ENST00000409469 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
CUL1-202ENST00000409469 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
CUL1-202ENST00000409469 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
CUL1-202ENST00000409469 NME9Q86XW9 330 aa13.08□□□□□ -0.32
CUL1-202ENST00000409469 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
CUL1-202ENST00000409469 PRR36Q9H6K5 1346 aa13.08□□□□□ -0.32
CUL1-202ENST00000409469 INSRP06213 1382 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms