RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CLCN6P51797 869 aa11.8□□□□□ -0.52
LSM5-202ENST00000409292 NUP155O75694 1391 aa11.79□□□□□ -0.52
LSM5-202ENST00000409292 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
LSM5-202ENST00000409292 LRRC59Q96AG4 307 aaKnown RBP11.79□□□□□ -0.52
LSM5-202ENST00000409292 COL16A1Q07092 1604 aaPredicted RBP11.78□□□□□ -0.52
LSM5-202ENST00000409292 DCCP43146 1447 aa11.78□□□□□ -0.52
LSM5-202ENST00000409292 FKBP8Q14318 412 aa11.78□□□□□ -0.52
LSM5-202ENST00000409292 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
LSM5-202ENST00000409292 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.52
LSM5-202ENST00000409292 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.52
LSM5-202ENST00000409292 UNC13BO14795 1591 aa11.77□□□□□ -0.53
LSM5-202ENST00000409292 GABBR2O75899 941 aa11.77□□□□□ -0.53
LSM5-202ENST00000409292 BRINP3Q76B58 766 aa11.77□□□□□ -0.53
LSM5-202ENST00000409292 ITGAEP38570 1179 aa11.76□□□□□ -0.53
LSM5-202ENST00000409292 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
LSM5-202ENST00000409292 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
LSM5-202ENST00000409292 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
LSM5-202ENST00000409292 NGLY1Q96IV0 654 aa11.75□□□□□ -0.53
LSM5-202ENST00000409292 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
LSM5-202ENST00000409292 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
LSM5-202ENST00000409292 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
LSM5-202ENST00000409292 AFF2P51816 1311 aa11.74□□□□□ -0.53
LSM5-202ENST00000409292 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
LSM5-202ENST00000409292 LRP6O75581 1613 aa11.74□□□□□ -0.53
LSM5-202ENST00000409292 IQGAP3Q86VI3 1631 aa11.74□□□□□ -0.53
LSM5-202ENST00000409292 E9PCH4 1651 aa11.73□□□□□ -0.53
LSM5-202ENST00000409292 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
LSM5-202ENST00000409292 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
LSM5-202ENST00000409292 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
LSM5-202ENST00000409292 SETD5Q9C0A6 1442 aa11.72□□□□□ -0.53
LSM5-202ENST00000409292 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
LSM5-202ENST00000409292 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.53
LSM5-202ENST00000409292 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.53
LSM5-202ENST00000409292 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
LSM5-202ENST00000409292 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
LSM5-202ENST00000409292 MST1RQ04912 1400 aa11.69□□□□□ -0.54
LSM5-202ENST00000409292 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
LSM5-202ENST00000409292 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
LSM5-202ENST00000409292 SETBP1Q9Y6X0 1596 aa11.69□□□□□ -0.54
LSM5-202ENST00000409292 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
LSM5-202ENST00000409292 TRPC5Q9UL62 973 aaPredicted RBP11.67□□□□□ -0.54
LSM5-202ENST00000409292 METP08581 1390 aa11.67□□□□□ -0.54
LSM5-202ENST00000409292 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
LSM5-202ENST00000409292 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
LSM5-202ENST00000409292 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
LSM5-202ENST00000409292 XRN1Q8IZH2 1706 aaKnown RBP11.66□□□□□ -0.54
LSM5-202ENST00000409292 MIER1Q8N108 512 aa11.66□□□□□ -0.54
LSM5-202ENST00000409292 USP21Q9UK80 565 aa11.66□□□□□ -0.54
LSM5-202ENST00000409292 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
LSM5-202ENST00000409292 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
LSM5-202ENST00000409292 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
LSM5-202ENST00000409292 DDX17Q92841 729 aaKnown RBP11.63□□□□□ -0.55
LSM5-202ENST00000409292 LRPPRCP42704 1394 aaKnown RBP11.63□□□□□ -0.55
LSM5-202ENST00000409292 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
LSM5-202ENST00000409292 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 RGS12O14924 1447 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 KIF1BO60333 1816 aa11.62□□□□□ -0.55
LSM5-202ENST00000409292 SOS2Q07890 1332 aaPredicted RBP11.61□□□□□ -0.55
LSM5-202ENST00000409292 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
LSM5-202ENST00000409292 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
LSM5-202ENST00000409292 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
LSM5-202ENST00000409292 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
LSM5-202ENST00000409292 FNBP4Q8N3X1 1017 aaPredicted RBP11.59□□□□□ -0.55
LSM5-202ENST00000409292 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
LSM5-202ENST00000409292 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
LSM5-202ENST00000409292 NALCNQ8IZF0 1738 aa11.58□□□□□ -0.56
LSM5-202ENST00000409292 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
LSM5-202ENST00000409292 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
LSM5-202ENST00000409292 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
LSM5-202ENST00000409292 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
LSM5-202ENST00000409292 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
LSM5-202ENST00000409292 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
LSM5-202ENST00000409292 FOXO3O43524 673 aa11.55□□□□□ -0.56
LSM5-202ENST00000409292 ATRNO75882 1429 aa11.54□□□□□ -0.56
LSM5-202ENST00000409292 NAIPQ13075 1403 aa11.54□□□□□ -0.56
LSM5-202ENST00000409292 LAMC1P11047 1609 aa11.54□□□□□ -0.56
LSM5-202ENST00000409292 GJD4Q96KN9 370 aaPredicted RBP11.54□□□□□ -0.56
LSM5-202ENST00000409292 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
LSM5-202ENST00000409292 STK26Q9P289 416 aa11.54□□□□□ -0.56
LSM5-202ENST00000409292 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
LSM5-202ENST00000409292 PSME1Q06323 249 aa11.53□□□□□ -0.56
LSM5-202ENST00000409292 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
LSM5-202ENST00000409292 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
LSM5-202ENST00000409292 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
LSM5-202ENST00000409292 CDC42BPGQ6DT37 1551 aa11.52□□□□□ -0.57
LSM5-202ENST00000409292 COL22A1Q8NFW1 1626 aaPredicted RBP11.51□□□□□ -0.57
LSM5-202ENST00000409292 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
LSM5-202ENST00000409292 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
LSM5-202ENST00000409292 RGL3Q3MIN7 710 aa11.51□□□□□ -0.57
LSM5-202ENST00000409292 UNC5CLQ8IV45 518 aa11.51□□□□□ -0.57
LSM5-202ENST00000409292 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
LSM5-202ENST00000409292 CCDC9Q9Y3X0 531 aaKnown RBP11.51□□□□□ -0.57
LSM5-202ENST00000409292 RRBP1Q9P2E9 1410 aaKnown RBP11.51□□□□□ -0.57
LSM5-202ENST00000409292 MYOM2P54296 1465 aa11.51□□□□□ -0.57
LSM5-202ENST00000409292 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
LSM5-202ENST00000409292 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
LSM5-202ENST00000409292 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms