RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
PBRM1-205ENST00000409057 MBD3O95983 291 aa12.97□□□□□ -0.33
PBRM1-205ENST00000409057 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
PBRM1-205ENST00000409057 KIAA1107Q9UPP5 1409 aa12.97□□□□□ -0.33
PBRM1-205ENST00000409057 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
PBRM1-205ENST00000409057 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
PBRM1-205ENST00000409057 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
PBRM1-205ENST00000409057 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
PBRM1-205ENST00000409057 AKNAQ7Z591 1439 aa12.96□□□□□ -0.33
PBRM1-205ENST00000409057 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
PBRM1-205ENST00000409057 TSPYL4Q9UJ04 414 aa12.96□□□□□ -0.34
PBRM1-205ENST00000409057 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.34
PBRM1-205ENST00000409057 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.34
PBRM1-205ENST00000409057 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
PBRM1-205ENST00000409057 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
PBRM1-205ENST00000409057 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
PBRM1-205ENST00000409057 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
PBRM1-205ENST00000409057 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
PBRM1-205ENST00000409057 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
PBRM1-205ENST00000409057 CPLX1O14810 134 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 CAVIN1Q6NZI2 390 aaKnown RBP12.94□□□□□ -0.34
PBRM1-205ENST00000409057 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
PBRM1-205ENST00000409057 ARHGAP5Q13017 1502 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 TRIM29Q14134 588 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
PBRM1-205ENST00000409057 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 CEP89Q96ST8 783 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
PBRM1-205ENST00000409057 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
PBRM1-205ENST00000409057 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
PBRM1-205ENST00000409057 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
PBRM1-205ENST00000409057 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
PBRM1-205ENST00000409057 RABEP1Q15276 862 aa12.93□□□□□ -0.34
PBRM1-205ENST00000409057 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
PBRM1-205ENST00000409057 ERC2O15083 957 aa12.93□□□□□ -0.34
PBRM1-205ENST00000409057 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
PBRM1-205ENST00000409057 MCM2P49736 904 aa12.92□□□□□ -0.34
PBRM1-205ENST00000409057 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
PBRM1-205ENST00000409057 MNS1Q8NEH6 495 aa12.92□□□□□ -0.34
PBRM1-205ENST00000409057 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
PBRM1-205ENST00000409057 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
PBRM1-205ENST00000409057 TROQ12816 1431 aaPredicted RBP12.92□□□□□ -0.34
PBRM1-205ENST00000409057 MARCH6O60337 910 aa12.92□□□□□ -0.34
PBRM1-205ENST00000409057 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
PBRM1-205ENST00000409057 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
PBRM1-205ENST00000409057 PSME1Q06323 249 aa12.91□□□□□ -0.34
PBRM1-205ENST00000409057 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
PBRM1-205ENST00000409057 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
PBRM1-205ENST00000409057 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
PBRM1-205ENST00000409057 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
PBRM1-205ENST00000409057 FAM69CQ0P6D2 419 aa12.9□□□□□ -0.34
PBRM1-205ENST00000409057 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
PBRM1-205ENST00000409057 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
PBRM1-205ENST00000409057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
PBRM1-205ENST00000409057 NEK4P51957 841 aa12.89□□□□□ -0.35
PBRM1-205ENST00000409057 TSPY26PQ9H489 355 aa12.89□□□□□ -0.35
PBRM1-205ENST00000409057 TRDNQ13061 729 aa12.89□□□□□ -0.35
PBRM1-205ENST00000409057 NAT10Q9H0A0 1025 aaKnown RBP12.89□□□□□ -0.35
PBRM1-205ENST00000409057 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
PBRM1-205ENST00000409057 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
PBRM1-205ENST00000409057 BCAR3O75815 825 aa12.88□□□□□ -0.35
PBRM1-205ENST00000409057 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
PBRM1-205ENST00000409057 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-205ENST00000409057 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
PBRM1-205ENST00000409057 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
PBRM1-205ENST00000409057 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-205ENST00000409057 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
PBRM1-205ENST00000409057 NAIPQ13075 1403 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 EVA1CP58658 441 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 NLRP6P59044 892 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 PDE4CQ08493 712 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
PBRM1-205ENST00000409057 NESP48681 1621 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 TRIM5Q9C035 493 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 DAPK1P53355 1430 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 PSMA5P28066 241 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 MCM4P33991 863 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
PBRM1-205ENST00000409057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-205ENST00000409057 GNAI3P08754 354 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 PDCP20941 246 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-205ENST00000409057 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
PBRM1-205ENST00000409057 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-205ENST00000409057 G3V3G9 751 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 APPP05067 770 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-205ENST00000409057 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
PBRM1-205ENST00000409057 ESPNB1AK53 854 aa12.85□□□□□ -0.35
PBRM1-205ENST00000409057 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-205ENST00000409057 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
PBRM1-205ENST00000409057 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
PBRM1-205ENST00000409057 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms