RNA–Protein interactions for RNA: ENST00000408667.1

MIR548F1-201, Transcript of microRNA 548f-1, humanhuman

BASIC

Gene MIR548F1, Length 84 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F1-201ENST00000408667 FOXC1Q12948 553 aa9.35□□□□□ -0.91
MIR548F1-201ENST00000408667 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
MIR548F1-201ENST00000408667 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
MIR548F1-201ENST00000408667 NUTM1Q86Y26 1132 aa9.34□□□□□ -0.91
MIR548F1-201ENST00000408667 HOXA2O43364 376 aa9.33□□□□□ -0.92
MIR548F1-201ENST00000408667 MMP16P51512 607 aa9.33□□□□□ -0.92
MIR548F1-201ENST00000408667 MYT1Q01538 1121 aa9.33□□□□□ -0.92
MIR548F1-201ENST00000408667 FAM217BQ9NTX9 383 aaPredicted RBP9.33□□□□□ -0.92
MIR548F1-201ENST00000408667 CYP4X1Q8N118 509 aa9.32□□□□□ -0.92
MIR548F1-201ENST00000408667 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
MIR548F1-201ENST00000408667 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
MIR548F1-201ENST00000408667 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
MIR548F1-201ENST00000408667 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
MIR548F1-201ENST00000408667 TRIM32Q13049 653 aa9.27□□□□□ -0.93
MIR548F1-201ENST00000408667 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
MIR548F1-201ENST00000408667 TOR4AQ9NXH8 423 aa9.27□□□□□ -0.93
MIR548F1-201ENST00000408667 ZMYND10O75800 440 aa9.26□□□□□ -0.93
MIR548F1-201ENST00000408667 SSTR3P32745 418 aaPredicted RBP9.26□□□□□ -0.93
MIR548F1-201ENST00000408667 RETREG3Q86VR2 466 aa9.26□□□□□ -0.93
MIR548F1-201ENST00000408667 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
MIR548F1-201ENST00000408667 REPIN1Q9BWE0 567 aaKnown RBP9.26□□□□□ -0.93
MIR548F1-201ENST00000408667 WNT7AO00755 349 aa9.25□□□□□ -0.93
MIR548F1-201ENST00000408667 JUNDP17535 347 aa9.25□□□□□ -0.93
MIR548F1-201ENST00000408667 HLA-CQ95604 372 aa9.25□□□□□ -0.93
MIR548F1-201ENST00000408667 FDX1P10109 184 aa9.24□□□□□ -0.93
MIR548F1-201ENST00000408667 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
MIR548F1-201ENST00000408667 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
MIR548F1-201ENST00000408667 AVPP01185 164 aa9.23□□□□□ -0.93
MIR548F1-201ENST00000408667 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
MIR548F1-201ENST00000408667 AMHR2Q16671 573 aa9.23□□□□□ -0.93
MIR548F1-201ENST00000408667 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
MIR548F1-201ENST00000408667 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
MIR548F1-201ENST00000408667 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
MIR548F1-201ENST00000408667 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
MIR548F1-201ENST00000408667 SNIP1Q8TAD8 396 aaKnown RBP9.22□□□□□ -0.93
MIR548F1-201ENST00000408667 AXIN1O15169 862 aa9.21□□□□□ -0.94
MIR548F1-201ENST00000408667 WNT7BP56706 349 aa9.21□□□□□ -0.94
MIR548F1-201ENST00000408667 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
MIR548F1-201ENST00000408667 GIGYF2Q6Y7W6 1299 aaKnown RBP9.2□□□□□ -0.94
MIR548F1-201ENST00000408667 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
MIR548F1-201ENST00000408667 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
MIR548F1-201ENST00000408667 SPDYE5A6NIY4 337 aa9.19□□□□□ -0.94
MIR548F1-201ENST00000408667 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
MIR548F1-201ENST00000408667 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
MIR548F1-201ENST00000408667 MS4A1P11836 297 aa9.18□□□□□ -0.94
MIR548F1-201ENST00000408667 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
MIR548F1-201ENST00000408667 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
MIR548F1-201ENST00000408667 MTMR2Q13614 643 aa9.16□□□□□ -0.94
MIR548F1-201ENST00000408667 RC3H1Q5TC82 1133 aaKnown RBP9.16□□□□□ -0.94
MIR548F1-201ENST00000408667 AK7Q96M32 723 aa9.16□□□□□ -0.94
MIR548F1-201ENST00000408667 BEGAINQ9BUH8 593 aa9.16□□□□□ -0.94
MIR548F1-201ENST00000408667 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
MIR548F1-201ENST00000408667 GJA5P36382 358 aa9.15□□□□□ -0.94
MIR548F1-201ENST00000408667 PTPRNQ16849 979 aa9.15□□□□□ -0.94
MIR548F1-201ENST00000408667 PCDHGC3Q9UN70 934 aa9.15□□□□□ -0.94
MIR548F1-201ENST00000408667 MOXD2PA6NHM9 499 aa9.14□□□□□ -0.95
MIR548F1-201ENST00000408667 SMPD1P17405 629 aa9.14□□□□□ -0.95
MIR548F1-201ENST00000408667 POTECB2RU33 542 aa9.13□□□□□ -0.95
MIR548F1-201ENST00000408667 NDUFV2P19404 249 aa9.13□□□□□ -0.95
MIR548F1-201ENST00000408667 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
MIR548F1-201ENST00000408667 TRIM66O15016 1216 aa9.12□□□□□ -0.95
MIR548F1-201ENST00000408667 SKOR1P84550 965 aa9.12□□□□□ -0.95
MIR548F1-201ENST00000408667 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
MIR548F1-201ENST00000408667 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
MIR548F1-201ENST00000408667 J3QL48 77 aa9.11□□□□□ -0.95
MIR548F1-201ENST00000408667 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
MIR548F1-201ENST00000408667 TBC1D2Q9BYX2 928 aa9.11□□□□□ -0.95
MIR548F1-201ENST00000408667 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
MIR548F1-201ENST00000408667 EVA1BQ9NVM1 165 aa9.1□□□□□ -0.95
MIR548F1-201ENST00000408667 KCNH2Q12809 1159 aa9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 UNC93B1Q9H1C4 597 aa9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 SENP2Q9HC62 589 aa9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 DACH1Q9UI36 760 aa9.09□□□□□ -0.95
MIR548F1-201ENST00000408667 ALDH1A1P00352 501 aa9.08□□□□□ -0.96
MIR548F1-201ENST00000408667 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
MIR548F1-201ENST00000408667 ZBTB3Q9H5J0 574 aa9.08□□□□□ -0.96
MIR548F1-201ENST00000408667 WASF2Q9Y6W5 498 aa9.08□□□□□ -0.96
MIR548F1-201ENST00000408667 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
MIR548F1-201ENST00000408667 SPTLC1O15269 473 aa9.06□□□□□ -0.96
MIR548F1-201ENST00000408667 SH3BP2P78314 561 aa9.06□□□□□ -0.96
MIR548F1-201ENST00000408667 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
MIR548F1-201ENST00000408667 HPS1Q92902 700 aa9.06□□□□□ -0.96
MIR548F1-201ENST00000408667 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
MIR548F1-201ENST00000408667 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
MIR548F1-201ENST00000408667 PDE4DQ08499 809 aa9.05□□□□□ -0.96
MIR548F1-201ENST00000408667 RIC3Q7Z5B4 369 aa9.05□□□□□ -0.96
MIR548F1-201ENST00000408667 SIAH2O43255 324 aa9.04□□□□□ -0.96
MIR548F1-201ENST00000408667 CTHP32929 405 aa9.04□□□□□ -0.96
MIR548F1-201ENST00000408667 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
MIR548F1-201ENST00000408667 LYPD8Q6UX82 237 aa9.03□□□□□ -0.96
MIR548F1-201ENST00000408667 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
MIR548F1-201ENST00000408667 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
MIR548F1-201ENST00000408667 BAP1Q92560 729 aa9.03□□□□□ -0.96
MIR548F1-201ENST00000408667 HRCP23327 699 aa9.02□□□□□ -0.97
MIR548F1-201ENST00000408667 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
MIR548F1-201ENST00000408667 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
MIR548F1-201ENST00000408667 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
MIR548F1-201ENST00000408667 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms