RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 NSD3Q9BZ95 1437 aa21.68■■□□□ 1.06
COL23A1-202ENST00000407622 SLC12A5Q9H2X9 1139 aa21.67■■□□□ 1.06
COL23A1-202ENST00000407622 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
COL23A1-202ENST00000407622 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
COL23A1-202ENST00000407622 AGLP35573 1532 aa21.66■■□□□ 1.06
COL23A1-202ENST00000407622 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
COL23A1-202ENST00000407622 NKTRP30414 1462 aaKnown RBP21.65■■□□□ 1.06
COL23A1-202ENST00000407622 BCAR3O75815 825 aa21.65■■□□□ 1.06
COL23A1-202ENST00000407622 NUTM2DQ5VT03 806 aaPredicted RBP21.65■■□□□ 1.06
COL23A1-202ENST00000407622 ARHGEF40Q8TER5 1519 aa21.65■■□□□ 1.06
COL23A1-202ENST00000407622 SIGLEC1Q9BZZ2 1709 aa21.65■■□□□ 1.06
COL23A1-202ENST00000407622 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
COL23A1-202ENST00000407622 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
COL23A1-202ENST00000407622 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
COL23A1-202ENST00000407622 ARHGAP31Q2M1Z3 1444 aa21.62■■□□□ 1.05
COL23A1-202ENST00000407622 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.62■■□□□ 1.05
COL23A1-202ENST00000407622 DEKP35659 375 aaKnown RBP21.61■■□□□ 1.05
COL23A1-202ENST00000407622 CENPQQ7L2Z9 268 aaPredicted RBP21.61■■□□□ 1.05
COL23A1-202ENST00000407622 E9PSI1 815 aa21.61■■□□□ 1.05
COL23A1-202ENST00000407622 MORC1Q86VD1 984 aa21.61■■□□□ 1.05
COL23A1-202ENST00000407622 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
COL23A1-202ENST00000407622 WWC1Q8IX03 1113 aa21.58■■□□□ 1.04
COL23A1-202ENST00000407622 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
COL23A1-202ENST00000407622 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
COL23A1-202ENST00000407622 RPGRIP1LQ68CZ1 1315 aa21.56■■□□□ 1.04
COL23A1-202ENST00000407622 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
COL23A1-202ENST00000407622 PIK3C2BO00750 1634 aa21.55■■□□□ 1.04
COL23A1-202ENST00000407622 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
COL23A1-202ENST00000407622 MLECQ14165 292 aa21.55■■□□□ 1.04
COL23A1-202ENST00000407622 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
COL23A1-202ENST00000407622 TULP4Q9NRJ4 1543 aa21.54■■□□□ 1.04
COL23A1-202ENST00000407622 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
COL23A1-202ENST00000407622 USP32Q8NFA0 1604 aa21.52■■□□□ 1.04
COL23A1-202ENST00000407622 MTHFSP49914 203 aa21.52■■□□□ 1.04
COL23A1-202ENST00000407622 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.03
COL23A1-202ENST00000407622 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
COL23A1-202ENST00000407622 RGS3P49796 1198 aa21.51■■□□□ 1.03
COL23A1-202ENST00000407622 SAFB2Q14151 953 aaKnown RBP eCLIP21.51■■□□□ 1.03
COL23A1-202ENST00000407622 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
COL23A1-202ENST00000407622 TCP11L2Q8N4U5 519 aa21.5■■□□□ 1.03
COL23A1-202ENST00000407622 CGNL1Q0VF96 1302 aa21.5■■□□□ 1.03
COL23A1-202ENST00000407622 RUNDC1Q96C34 613 aa21.5■■□□□ 1.03
COL23A1-202ENST00000407622 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
COL23A1-202ENST00000407622 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
COL23A1-202ENST00000407622 IDI1Q13907 227 aa21.49■■□□□ 1.03
COL23A1-202ENST00000407622 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
COL23A1-202ENST00000407622 IGHDP01880 384 aa21.48■■□□□ 1.03
COL23A1-202ENST00000407622 EVC2Q86UK5 1308 aa21.48■■□□□ 1.03
COL23A1-202ENST00000407622 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
COL23A1-202ENST00000407622 SLC52A1Q9NWF4 448 aa21.47■■□□□ 1.03
COL23A1-202ENST00000407622 ANKRD36BQ8N2N9 1353 aa21.46■■□□□ 1.03
COL23A1-202ENST00000407622 FAM161AQ3B820 660 aa21.46■■□□□ 1.03
COL23A1-202ENST00000407622 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
COL23A1-202ENST00000407622 MYO5BQ9ULV0 1848 aa21.46■■□□□ 1.03
COL23A1-202ENST00000407622 CLTCQ00610 1675 aaKnown RBP21.46■■□□□ 1.03
COL23A1-202ENST00000407622 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
COL23A1-202ENST00000407622 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
COL23A1-202ENST00000407622 PREX1Q8TCU6 1659 aa21.46■■□□□ 1.03
COL23A1-202ENST00000407622 STK26Q9P289 416 aa21.44■■□□□ 1.02
COL23A1-202ENST00000407622 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
COL23A1-202ENST00000407622 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
COL23A1-202ENST00000407622 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
COL23A1-202ENST00000407622 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
COL23A1-202ENST00000407622 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
COL23A1-202ENST00000407622 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
COL23A1-202ENST00000407622 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
COL23A1-202ENST00000407622 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
COL23A1-202ENST00000407622 BCL2L13Q9BXK5 485 aa21.41■■□□□ 1.02
COL23A1-202ENST00000407622 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
COL23A1-202ENST00000407622 DDRGK1Q96HY6 314 aa21.4■■□□□ 1.02
COL23A1-202ENST00000407622 PUS7Q96PZ0 661 aaKnown RBP21.4■■□□□ 1.02
COL23A1-202ENST00000407622 A0A1W2PP64 1363 aa21.4■■□□□ 1.02
COL23A1-202ENST00000407622 ZMYM3Q14202 1370 aa21.4■■□□□ 1.02
COL23A1-202ENST00000407622 RLBP1P12271 317 aa21.39■■□□□ 1.02
COL23A1-202ENST00000407622 NEFMP07197 916 aa21.39■■□□□ 1.01
COL23A1-202ENST00000407622 U2AF1L5P0DN76 240 aaPredicted RBP21.39■■□□□ 1.01
COL23A1-202ENST00000407622 U2AF1Q01081 240 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL23A1-202ENST00000407622 WDR63Q8IWG1 891 aa21.39■■□□□ 1.01
COL23A1-202ENST00000407622 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
COL23A1-202ENST00000407622 NSD2O96028 1365 aa21.38■■□□□ 1.01
COL23A1-202ENST00000407622 SRPK2P78362 688 aaKnown RBP21.37■■□□□ 1.01
COL23A1-202ENST00000407622 SPATA31D1Q6ZQQ2 1576 aa21.37■■□□□ 1.01
COL23A1-202ENST00000407622 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
COL23A1-202ENST00000407622 TMEM131LA2VDJ0 1609 aa21.36■■□□□ 1.01
COL23A1-202ENST00000407622 PTPRMP28827 1452 aa21.36■■□□□ 1.01
COL23A1-202ENST00000407622 CCDC27Q2M243 656 aa21.36■■□□□ 1.01
COL23A1-202ENST00000407622 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
COL23A1-202ENST00000407622 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
COL23A1-202ENST00000407622 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
COL23A1-202ENST00000407622 ADGRB2O60241 1585 aa21.35■■□□□ 1.01
COL23A1-202ENST00000407622 PRAM1Q96QH2 718 aa21.33■■□□□ 1.01
COL23A1-202ENST00000407622 PCDHB15Q9Y5E8 787 aa21.33■■□□□ 1
COL23A1-202ENST00000407622 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
COL23A1-202ENST00000407622 CD163L1Q9NR16 1453 aa21.32■■□□□ 1
COL23A1-202ENST00000407622 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
COL23A1-202ENST00000407622 COL3A1P02461 1466 aaPredicted RBP21.31■■□□□ 1
COL23A1-202ENST00000407622 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
COL23A1-202ENST00000407622 YTHDC2Q9H6S0 1430 aaKnown RBP21.3■■□□□ 1
COL23A1-202ENST00000407622 U2SURPO15042 1029 aaKnown RBP21.3■■□□□ 1
COL23A1-202ENST00000407622 FYB1O15117 783 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms