RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CGNL1Q0VF96 1302 aa22.06■■□□□ 1.12
NUP50-203ENST00000407019 SHPRHQ149N8 1683 aa22.06■■□□□ 1.12
NUP50-203ENST00000407019 ANP32AP39687 249 aaKnown RBP22.05■■□□□ 1.12
NUP50-203ENST00000407019 TMEM131LA2VDJ0 1609 aa22.05■■□□□ 1.12
NUP50-203ENST00000407019 E9PSI1 815 aa22.05■■□□□ 1.12
NUP50-203ENST00000407019 ANKRD36BQ8N2N9 1353 aa22.04■■□□□ 1.12
NUP50-203ENST00000407019 MS4A1P11836 297 aa22.03■■□□□ 1.12
NUP50-203ENST00000407019 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
NUP50-203ENST00000407019 SPINK5Q9NQ38 1064 aaPredicted RBP22.03■■□□□ 1.12
NUP50-203ENST00000407019 NSD2O96028 1365 aa22.02■■□□□ 1.12
NUP50-203ENST00000407019 MYO5BQ9ULV0 1848 aa22.02■■□□□ 1.12
NUP50-203ENST00000407019 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.11
NUP50-203ENST00000407019 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
NUP50-203ENST00000407019 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
NUP50-203ENST00000407019 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
NUP50-203ENST00000407019 DIP2BQ9P265 1576 aa21.98■■□□□ 1.11
NUP50-203ENST00000407019 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
NUP50-203ENST00000407019 IPO9Q96P70 1041 aaKnown RBP21.97■■□□□ 1.11
NUP50-203ENST00000407019 IQSEC2Q5JU85 1478 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 PDE4AP27815 886 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 FAM69CQ0P6D2 419 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 KDM2BQ8NHM5 1336 aa21.97■■□□□ 1.11
NUP50-203ENST00000407019 PTPRMP28827 1452 aa21.96■■□□□ 1.11
NUP50-203ENST00000407019 MTHFSP49914 203 aa21.96■■□□□ 1.11
NUP50-203ENST00000407019 SAFB2Q14151 953 aaKnown RBP eCLIP21.96■■□□□ 1.11
NUP50-203ENST00000407019 STK26Q9P289 416 aa21.96■■□□□ 1.11
NUP50-203ENST00000407019 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
NUP50-203ENST00000407019 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
NUP50-203ENST00000407019 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
NUP50-203ENST00000407019 RIMBP3CA6NJZ7 1639 aa21.94■■□□□ 1.1
NUP50-203ENST00000407019 RIMBP3BA6NNM3 1639 aa21.94■■□□□ 1.1
NUP50-203ENST00000407019 RIMBP3Q9UFD9 1639 aa21.94■■□□□ 1.1
NUP50-203ENST00000407019 YTHDC2Q9H6S0 1430 aaKnown RBP21.93■■□□□ 1.1
NUP50-203ENST00000407019 FBXO31Q5XUX0 539 aaPredicted RBP21.93■■□□□ 1.1
NUP50-203ENST00000407019 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
NUP50-203ENST00000407019 AGLP35573 1532 aa21.92■■□□□ 1.1
NUP50-203ENST00000407019 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
NUP50-203ENST00000407019 ATAD2Q6PL18 1390 aa21.92■■□□□ 1.1
NUP50-203ENST00000407019 ABCC11Q96J66 1382 aa21.92■■□□□ 1.1
NUP50-203ENST00000407019 BCAR3O75815 825 aa21.91■■□□□ 1.1
NUP50-203ENST00000407019 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
NUP50-203ENST00000407019 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
NUP50-203ENST00000407019 TCP11L2Q8N4U5 519 aa21.91■■□□□ 1.1
NUP50-203ENST00000407019 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
NUP50-203ENST00000407019 ALKQ9UM73 1620 aa21.9■■□□□ 1.1
NUP50-203ENST00000407019 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.1
NUP50-203ENST00000407019 PRAM1Q96QH2 718 aa21.89■■□□□ 1.1
NUP50-203ENST00000407019 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
NUP50-203ENST00000407019 POGKQ9P215 609 aa21.89■■□□□ 1.09
NUP50-203ENST00000407019 NEUROD2Q15784 382 aa21.88■■□□□ 1.09
NUP50-203ENST00000407019 RRP7AQ9Y3A4 280 aaKnown RBP21.88■■□□□ 1.09
NUP50-203ENST00000407019 MINK1Q8N4C8 1332 aaPredicted RBP21.88■■□□□ 1.09
NUP50-203ENST00000407019 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
NUP50-203ENST00000407019 TSPOAP1O95153 1857 aa21.87■■□□□ 1.09
NUP50-203ENST00000407019 SKAP1Q86WV1 359 aa21.87■■□□□ 1.09
NUP50-203ENST00000407019 WDR63Q8IWG1 891 aa21.87■■□□□ 1.09
NUP50-203ENST00000407019 ZBTB47Q9UFB7 747 aaPredicted RBP21.87■■□□□ 1.09
NUP50-203ENST00000407019 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
NUP50-203ENST00000407019 TERF2IPQ9NYB0 399 aa21.86■■□□□ 1.09
NUP50-203ENST00000407019 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
NUP50-203ENST00000407019 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
NUP50-203ENST00000407019 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
NUP50-203ENST00000407019 SPATA31D1Q6ZQQ2 1576 aa21.84■■□□□ 1.09
NUP50-203ENST00000407019 MED14O60244 1454 aa21.84■■□□□ 1.09
NUP50-203ENST00000407019 CD163L1Q9NR16 1453 aa21.84■■□□□ 1.09
NUP50-203ENST00000407019 ADGRB2O60241 1585 aa21.83■■□□□ 1.09
NUP50-203ENST00000407019 U2AF1L5P0DN76 240 aaPredicted RBP21.83■■□□□ 1.09
NUP50-203ENST00000407019 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.09
NUP50-203ENST00000407019 ANKRD26Q9UPS8 1709 aa21.83■■□□□ 1.09
NUP50-203ENST00000407019 GGNBP2Q9H3C7 697 aa21.82■■□□□ 1.08
NUP50-203ENST00000407019 A2ML1A8K2U0 1454 aa21.82■■□□□ 1.08
NUP50-203ENST00000407019 CANXP27824 592 aaKnown RBP21.81■■□□□ 1.08
NUP50-203ENST00000407019 ARHGEF40Q8TER5 1519 aa21.81■■□□□ 1.08
NUP50-203ENST00000407019 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
NUP50-203ENST00000407019 NLRP1Q9C000 1473 aa21.8■■□□□ 1.08
NUP50-203ENST00000407019 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
NUP50-203ENST00000407019 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
NUP50-203ENST00000407019 CDK19Q9BWU1 502 aa21.79■■□□□ 1.08
NUP50-203ENST00000407019 FYB1O15117 783 aa21.78■■□□□ 1.08
NUP50-203ENST00000407019 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
NUP50-203ENST00000407019 RIMS2Q9UQ26 1411 aa21.78■■□□□ 1.08
NUP50-203ENST00000407019 MYH16Q9H6N6 1097 aa21.77■■□□□ 1.08
NUP50-203ENST00000407019 SETD1AO15047 1707 aaKnown RBP21.75■■□□□ 1.07
NUP50-203ENST00000407019 PANK1Q8TE04 598 aa21.75■■□□□ 1.07
NUP50-203ENST00000407019 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
NUP50-203ENST00000407019 FRAT1Q92837 279 aaPredicted RBP21.74■■□□□ 1.07
NUP50-203ENST00000407019 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
NUP50-203ENST00000407019 KIF20BQ96Q89 1820 aa21.74■■□□□ 1.07
NUP50-203ENST00000407019 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
NUP50-203ENST00000407019 COG6Q9Y2V7 657 aa21.73■■□□□ 1.07
NUP50-203ENST00000407019 MLECQ14165 292 aa21.73■■□□□ 1.07
NUP50-203ENST00000407019 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
NUP50-203ENST00000407019 PLEKHF1Q96S99 279 aa21.73■■□□□ 1.07
NUP50-203ENST00000407019 ATP7BP35670 1465 aa21.71■■□□□ 1.07
NUP50-203ENST00000407019 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
NUP50-203ENST00000407019 IGHDP01880 384 aa21.7■■□□□ 1.06
NUP50-203ENST00000407019 RGS3P49796 1198 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms