RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 BRD4O60885 1362 aaPredicted RBP25.68■■□□□ 1.7
RELA-202ENST00000406246 TNNT2P45379 298 aaPredicted RBP25.67■■□□□ 1.7
RELA-202ENST00000406246 HDGFP51858 240 aaKnown RBP25.67■■□□□ 1.7
RELA-202ENST00000406246 NSD3Q9BZ95 1437 aa25.66■■□□□ 1.7
RELA-202ENST00000406246 PPP2R1AP30153 589 aa25.65■■□□□ 1.7
RELA-202ENST00000406246 CDK19Q9BWU1 502 aa25.65■■□□□ 1.7
RELA-202ENST00000406246 LRPPRCP42704 1394 aaKnown RBP25.65■■□□□ 1.7
RELA-202ENST00000406246 SALL2Q9Y467 1007 aaPredicted RBP25.65■■□□□ 1.7
RELA-202ENST00000406246 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
RELA-202ENST00000406246 EID1Q9Y6B2 187 aa25.62■■□□□ 1.69
RELA-202ENST00000406246 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
RELA-202ENST00000406246 NCKAP5LQ9HCH0 1330 aa25.59■■□□□ 1.69
RELA-202ENST00000406246 THEMISQ8N1K5 641 aaPredicted RBP25.59■■□□□ 1.69
RELA-202ENST00000406246 CABP1Q9NZU7 370 aa25.57■■□□□ 1.68
RELA-202ENST00000406246 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
RELA-202ENST00000406246 NUTM2FA1L443 756 aa25.57■■□□□ 1.68
RELA-202ENST00000406246 ROBO2Q9HCK4 1378 aa25.56■■□□□ 1.68
RELA-202ENST00000406246 A0A1W2PP64 1363 aa25.55■■□□□ 1.68
RELA-202ENST00000406246 ADAMTSL3P82987 1691 aa25.55■■□□□ 1.68
RELA-202ENST00000406246 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
RELA-202ENST00000406246 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
RELA-202ENST00000406246 PTPRUQ92729 1446 aa25.53■■□□□ 1.68
RELA-202ENST00000406246 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
RELA-202ENST00000406246 SLIT1O75093 1534 aa25.52■■□□□ 1.68
RELA-202ENST00000406246 ARHGAP23Q9P227 1491 aa25.52■■□□□ 1.68
RELA-202ENST00000406246 ANKRD36BQ8N2N9 1353 aa25.52■■□□□ 1.68
RELA-202ENST00000406246 MORC1Q86VD1 984 aa25.52■■□□□ 1.68
RELA-202ENST00000406246 ADAMTS8Q9UP79 889 aa25.51■■□□□ 1.67
RELA-202ENST00000406246 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
RELA-202ENST00000406246 GGNBP2Q9H3C7 697 aa25.5■■□□□ 1.67
RELA-202ENST00000406246 AMOTL2Q9Y2J4 779 aa25.5■■□□□ 1.67
RELA-202ENST00000406246 WASLO00401 505 aaPredicted RBP25.49■■□□□ 1.67
RELA-202ENST00000406246 PUS7Q96PZ0 661 aaKnown RBP25.48■■□□□ 1.67
RELA-202ENST00000406246 ATAD2Q6PL18 1390 aa25.48■■□□□ 1.67
RELA-202ENST00000406246 CGNL1Q0VF96 1302 aa25.48■■□□□ 1.67
RELA-202ENST00000406246 SUPT16HQ9Y5B9 1047 aaKnown RBP25.48■■□□□ 1.67
RELA-202ENST00000406246 CD163L1Q9NR16 1453 aa25.48■■□□□ 1.67
RELA-202ENST00000406246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.46■■□□□ 1.67
RELA-202ENST00000406246 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
RELA-202ENST00000406246 MED14O60244 1454 aa25.46■■□□□ 1.67
RELA-202ENST00000406246 IRX6P78412 446 aaPredicted RBP25.45■■□□□ 1.67
RELA-202ENST00000406246 FKBP8Q14318 412 aa25.45■■□□□ 1.66
RELA-202ENST00000406246 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
RELA-202ENST00000406246 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.44■■□□□ 1.66
RELA-202ENST00000406246 CPS1P31327 1500 aa25.44■■□□□ 1.66
RELA-202ENST00000406246 TERF2IPQ9NYB0 399 aa25.43■■□□□ 1.66
RELA-202ENST00000406246 TECPR2O15040 1411 aa25.43■■□□□ 1.66
RELA-202ENST00000406246 NUDT16Q96DE0 195 aaKnown RBP25.43■■□□□ 1.66
RELA-202ENST00000406246 WDR43Q15061 677 aaKnown RBP eCLIP25.43■■□□□ 1.66
RELA-202ENST00000406246 CCDC146Q8IYE0 955 aa25.43■■□□□ 1.66
RELA-202ENST00000406246 FBLN1P23142 703 aa25.42■■□□□ 1.66
RELA-202ENST00000406246 TBX22Q9Y458 520 aa25.42■■□□□ 1.66
RELA-202ENST00000406246 PRR36Q9H6K5 1346 aa25.42■■□□□ 1.66
RELA-202ENST00000406246 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
RELA-202ENST00000406246 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
RELA-202ENST00000406246 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
RELA-202ENST00000406246 FYB1O15117 783 aa25.4■■□□□ 1.66
RELA-202ENST00000406246 PPIP5K1Q6PFW1 1433 aa25.39■■□□□ 1.66
RELA-202ENST00000406246 KCNA6P17658 529 aa25.39■■□□□ 1.66
RELA-202ENST00000406246 MTHFSP49914 203 aa25.39■■□□□ 1.65
RELA-202ENST00000406246 ANKLE2Q86XL3 938 aa25.38■■□□□ 1.65
RELA-202ENST00000406246 ZRANB1Q9UGI0 708 aa25.36■■□□□ 1.65
RELA-202ENST00000406246 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
RELA-202ENST00000406246 SIRT1Q96EB6 747 aa25.36■■□□□ 1.65
RELA-202ENST00000406246 USP32Q8NFA0 1604 aa25.35■■□□□ 1.65
RELA-202ENST00000406246 CDCA7LQ96GN5 454 aa25.34■■□□□ 1.65
RELA-202ENST00000406246 CCDC61Q9Y6R9 512 aa25.33■■□□□ 1.65
RELA-202ENST00000406246 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
RELA-202ENST00000406246 ZNF142P52746 1687 aaPredicted RBP25.32■■□□□ 1.64
RELA-202ENST00000406246 NME9Q86XW9 330 aa25.31■■□□□ 1.64
RELA-202ENST00000406246 ATP7BP35670 1465 aa25.31■■□□□ 1.64
RELA-202ENST00000406246 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
RELA-202ENST00000406246 NEFLP07196 543 aa25.29■■□□□ 1.64
RELA-202ENST00000406246 RGPD8O14715 1765 aaPredicted RBP25.27■■□□□ 1.64
RELA-202ENST00000406246 NUDCQ9Y266 331 aa25.27■■□□□ 1.64
RELA-202ENST00000406246 PPM1GO15355 546 aaPredicted RBP25.27■■□□□ 1.64
RELA-202ENST00000406246 CPSF1Q10570 1443 aaKnown RBP25.25■■□□□ 1.63
RELA-202ENST00000406246 APAF1O14727 1248 aa25.25■■□□□ 1.63
RELA-202ENST00000406246 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
RELA-202ENST00000406246 NSD2O96028 1365 aa25.25■■□□□ 1.63
RELA-202ENST00000406246 KIF20BQ96Q89 1820 aa25.25■■□□□ 1.63
RELA-202ENST00000406246 ACEP12821 1306 aa25.24■■□□□ 1.63
RELA-202ENST00000406246 XRN1Q8IZH2 1706 aaKnown RBP25.24■■□□□ 1.63
RELA-202ENST00000406246 DIP2AQ14689 1571 aa25.24■■□□□ 1.63
RELA-202ENST00000406246 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
RELA-202ENST00000406246 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
RELA-202ENST00000406246 HSPA2P54652 639 aa25.23■■□□□ 1.63
RELA-202ENST00000406246 NKTRP30414 1462 aaKnown RBP25.23■■□□□ 1.63
RELA-202ENST00000406246 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
RELA-202ENST00000406246 CDC42BPGQ6DT37 1551 aa25.21■■□□□ 1.63
RELA-202ENST00000406246 NEUROD2Q15784 382 aa25.21■■□□□ 1.63
RELA-202ENST00000406246 ADGRB2O60241 1585 aa25.2■■□□□ 1.63
RELA-202ENST00000406246 ANKRD26Q9UPS8 1709 aa25.2■■□□□ 1.62
RELA-202ENST00000406246 RRP7AQ9Y3A4 280 aaKnown RBP25.2■■□□□ 1.62
RELA-202ENST00000406246 ITSN1Q15811 1721 aa25.19■■□□□ 1.62
RELA-202ENST00000406246 CHD2O14647 1828 aaKnown RBP25.19■■□□□ 1.62
RELA-202ENST00000406246 NPHP4O75161 1426 aaPredicted RBP25.19■■□□□ 1.62
RELA-202ENST00000406246 CFAP53Q96M91 514 aa25.18■■□□□ 1.62
RELA-202ENST00000406246 EDC4Q6P2E9 1401 aaKnown RBP25.18■■□□□ 1.62
RELA-202ENST00000406246 U2SURPO15042 1029 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms