RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-204ENST00000405493 MSNP26038 577 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-204ENST00000405493 VPS37DQ86XT2 251 aa14.55□□□□□ -0.08
RAPGEF3-204ENST00000405493 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
RAPGEF3-204ENST00000405493 ZBED9Q6R2W3 1325 aa14.55□□□□□ -0.08
RAPGEF3-204ENST00000405493 NGLY1Q96IV0 654 aa14.54□□□□□ -0.08
RAPGEF3-204ENST00000405493 CABP1Q9NZU7 370 aa14.54□□□□□ -0.08
RAPGEF3-204ENST00000405493 TRIM6-TRIM34B2RNG4 842 aa14.54□□□□□ -0.08
RAPGEF3-204ENST00000405493 DRC7Q8IY82 874 aa14.54□□□□□ -0.08
RAPGEF3-204ENST00000405493 MAP3K1Q13233 1512 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 KIF6Q6ZMV9 814 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 PDE4AP27815 886 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 GBP4Q96PP9 640 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 CHMP4CQ96CF2 233 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
RAPGEF3-204ENST00000405493 ADAMTS12P58397 1594 aa14.52□□□□□ -0.08
RAPGEF3-204ENST00000405493 NRDCO43847 1150 aa14.52□□□□□ -0.08
RAPGEF3-204ENST00000405493 NUDT16Q96DE0 195 aaKnown RBP14.52□□□□□ -0.08
RAPGEF3-204ENST00000405493 GZF1Q9H116 711 aaPredicted RBP14.52□□□□□ -0.09
RAPGEF3-204ENST00000405493 ABCC2Q92887 1545 aa14.52□□□□□ -0.09
RAPGEF3-204ENST00000405493 CABP4P57796 275 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 IDI1Q13907 227 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 GSE1Q14687 1217 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 ATP10BO94823 1461 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 GOLGA6L3A6NEY3 463 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 RIC3Q7Z5B4 369 aa14.51□□□□□ -0.09
RAPGEF3-204ENST00000405493 RAPGEF6Q8TEU7 1601 aa14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 ZKSCAN2Q63HK3 967 aa14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 ABCC10Q5T3U5 1492 aa14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
RAPGEF3-204ENST00000405493 PLIN1O60240 522 aa14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 NUP160Q12769 1436 aa14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 FKBP5Q13451 457 aaPredicted RBP14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 A2MP01023 1474 aa14.49□□□□□ -0.09
RAPGEF3-204ENST00000405493 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 HMOX1P09601 288 aa14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 PTMSP20962 102 aa14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
RAPGEF3-204ENST00000405493 NOL8Q76FK4 1167 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-204ENST00000405493 ABCC5O15440 1437 aa14.47□□□□□ -0.09
RAPGEF3-204ENST00000405493 CHAF1AQ13111 956 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF3-204ENST00000405493 TOMM22Q9NS69 142 aa14.47□□□□□ -0.09
RAPGEF3-204ENST00000405493 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF3-204ENST00000405493 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-204ENST00000405493 FBXW7Q969H0 707 aa14.46□□□□□ -0.09
RAPGEF3-204ENST00000405493 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.09
RAPGEF3-204ENST00000405493 G3BP1Q13283 466 aaKnown RBP eCLIP14.46□□□□□ -0.09
RAPGEF3-204ENST00000405493 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-204ENST00000405493 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
RAPGEF3-204ENST00000405493 APAF1O14727 1248 aa14.46□□□□□ -0.1
RAPGEF3-204ENST00000405493 MTHFSP49914 203 aa14.46□□□□□ -0.1
RAPGEF3-204ENST00000405493 CLSTN1O94985 981 aa14.45□□□□□ -0.1
RAPGEF3-204ENST00000405493 ADAMTS2O95450 1211 aa14.45□□□□□ -0.1
RAPGEF3-204ENST00000405493 CCDC30Q5VVM6 783 aa14.45□□□□□ -0.1
RAPGEF3-204ENST00000405493 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-204ENST00000405493 KIF3AQ9Y496 699 aa14.45□□□□□ -0.1
RAPGEF3-204ENST00000405493 RRP1P56182 461 aaKnown RBP14.44□□□□□ -0.1
RAPGEF3-204ENST00000405493 CCDC7Q96M83 1385 aa14.44□□□□□ -0.1
RAPGEF3-204ENST00000405493 XPCQ01831 940 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-204ENST00000405493 EXOC6Q8TAG9 804 aa14.44□□□□□ -0.1
RAPGEF3-204ENST00000405493 KIF16BQ96L93 1317 aa14.44□□□□□ -0.1
RAPGEF3-204ENST00000405493 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 CWC22Q9HCG8 908 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 NPHP3Q7Z494 1330 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 NBPF1Q3BBV0 1214 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 KRT28Q7Z3Y7 464 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 UHRF1BP1Q6BDS2 1440 aa14.43□□□□□ -0.1
RAPGEF3-204ENST00000405493 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 KIF7Q2M1P5 1343 aa14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 NCOA1Q15788 1441 aa14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 WASLO00401 505 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 FOXO3O43524 673 aa14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 GPATCH8Q9UKJ3 1502 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-204ENST00000405493 IFIT2P09913 472 aaKnown RBP14.41□□□□□ -0.1
RAPGEF3-204ENST00000405493 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
RAPGEF3-204ENST00000405493 DDX19BQ9UMR2 479 aa14.41□□□□□ -0.1
RAPGEF3-204ENST00000405493 KIAA0556O60303 1618 aa14.41□□□□□ -0.1
RAPGEF3-204ENST00000405493 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
RAPGEF3-204ENST00000405493 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
RAPGEF3-204ENST00000405493 NECTIN2Q92692 538 aa14.4□□□□□ -0.1
RAPGEF3-204ENST00000405493 DUOX2Q9NRD8 1548 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms