RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
NUCB1-201ENST00000405315 SLC12A5Q9H2X9 1139 aa18.97■□□□□ 0.63
NUCB1-201ENST00000405315 VIRMAQ69YN4 1812 aaKnown RBP18.97■□□□□ 0.63
NUCB1-201ENST00000405315 GGT6Q6P531 493 aa18.97■□□□□ 0.63
NUCB1-201ENST00000405315 NINLQ9Y2I6 1382 aa18.97■□□□□ 0.63
NUCB1-201ENST00000405315 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
NUCB1-201ENST00000405315 TMEM132EQ6IEE7 984 aa18.96■□□□□ 0.63
NUCB1-201ENST00000405315 GLI2P10070 1586 aa18.96■□□□□ 0.63
NUCB1-201ENST00000405315 ABCC3O15438 1527 aa18.96■□□□□ 0.63
NUCB1-201ENST00000405315 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
NUCB1-201ENST00000405315 CAMSAP1Q5T5Y3 1602 aa18.95■□□□□ 0.62
NUCB1-201ENST00000405315 MLH3Q9UHC1 1453 aa18.95■□□□□ 0.62
NUCB1-201ENST00000405315 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
NUCB1-201ENST00000405315 PDE3AQ14432 1141 aa18.94■□□□□ 0.62
NUCB1-201ENST00000405315 ARHGEF28Q8N1W1 1705 aaKnown RBP18.94■□□□□ 0.62
NUCB1-201ENST00000405315 NEUROD2Q15784 382 aa18.94■□□□□ 0.62
NUCB1-201ENST00000405315 RUNDC1Q96C34 613 aa18.94■□□□□ 0.62
NUCB1-201ENST00000405315 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
NUCB1-201ENST00000405315 SIGLEC1Q9BZZ2 1709 aa18.93■□□□□ 0.62
NUCB1-201ENST00000405315 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
NUCB1-201ENST00000405315 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
NUCB1-201ENST00000405315 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
NUCB1-201ENST00000405315 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
NUCB1-201ENST00000405315 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
NUCB1-201ENST00000405315 IGHDP01880 384 aa18.92■□□□□ 0.62
NUCB1-201ENST00000405315 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
NUCB1-201ENST00000405315 PANK1Q8TE04 598 aa18.91■□□□□ 0.62
NUCB1-201ENST00000405315 COG6Q9Y2V7 657 aa18.91■□□□□ 0.62
NUCB1-201ENST00000405315 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
NUCB1-201ENST00000405315 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
NUCB1-201ENST00000405315 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
NUCB1-201ENST00000405315 PIK3C2BO00750 1634 aa18.9■□□□□ 0.62
NUCB1-201ENST00000405315 MTHFSP49914 203 aa18.89■□□□□ 0.61
NUCB1-201ENST00000405315 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
NUCB1-201ENST00000405315 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
NUCB1-201ENST00000405315 NEXMIFQ5QGS0 1516 aa18.88■□□□□ 0.61
NUCB1-201ENST00000405315 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
NUCB1-201ENST00000405315 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
NUCB1-201ENST00000405315 ANKRD36BQ8N2N9 1353 aa18.87■□□□□ 0.61
NUCB1-201ENST00000405315 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
NUCB1-201ENST00000405315 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
NUCB1-201ENST00000405315 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
NUCB1-201ENST00000405315 NSD2O96028 1365 aa18.85■□□□□ 0.61
NUCB1-201ENST00000405315 MAPK8IP3Q9UPT6 1336 aa18.84■□□□□ 0.61
NUCB1-201ENST00000405315 NFKBIBQ15653 356 aa18.84■□□□□ 0.61
NUCB1-201ENST00000405315 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.61
NUCB1-201ENST00000405315 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
NUCB1-201ENST00000405315 CCDC27Q2M243 656 aa18.83■□□□□ 0.6
NUCB1-201ENST00000405315 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
NUCB1-201ENST00000405315 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.6
NUCB1-201ENST00000405315 BCL2L13Q9BXK5 485 aa18.82■□□□□ 0.6
NUCB1-201ENST00000405315 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
NUCB1-201ENST00000405315 TNNQ9UQP3 1299 aa18.81■□□□□ 0.6
NUCB1-201ENST00000405315 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
NUCB1-201ENST00000405315 RLBP1P12271 317 aa18.8■□□□□ 0.6
NUCB1-201ENST00000405315 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
NUCB1-201ENST00000405315 MYO5BQ9ULV0 1848 aa18.8■□□□□ 0.6
NUCB1-201ENST00000405315 SAFB2Q14151 953 aaKnown RBP eCLIP18.8■□□□□ 0.6
NUCB1-201ENST00000405315 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
NUCB1-201ENST00000405315 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
NUCB1-201ENST00000405315 AAMPQ13685 434 aa18.79■□□□□ 0.6
NUCB1-201ENST00000405315 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
NUCB1-201ENST00000405315 NEO1Q92859 1461 aa18.79■□□□□ 0.6
NUCB1-201ENST00000405315 USP19O94966 1318 aa18.77■□□□□ 0.6
NUCB1-201ENST00000405315 A0A1W2PP64 1363 aa18.77■□□□□ 0.6
NUCB1-201ENST00000405315 PCDHB15Q9Y5E8 787 aa18.77■□□□□ 0.6
NUCB1-201ENST00000405315 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
NUCB1-201ENST00000405315 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
NUCB1-201ENST00000405315 ANKRD26Q9UPS8 1709 aa18.76■□□□□ 0.59
NUCB1-201ENST00000405315 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
NUCB1-201ENST00000405315 RICTORQ6R327 1708 aa18.75■□□□□ 0.59
NUCB1-201ENST00000405315 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
NUCB1-201ENST00000405315 STK26Q9P289 416 aa18.75■□□□□ 0.59
NUCB1-201ENST00000405315 SEC24BO95487 1268 aa18.75■□□□□ 0.59
NUCB1-201ENST00000405315 IDI1Q13907 227 aa18.75■□□□□ 0.59
NUCB1-201ENST00000405315 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
NUCB1-201ENST00000405315 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
NUCB1-201ENST00000405315 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
NUCB1-201ENST00000405315 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
NUCB1-201ENST00000405315 GSE1Q14687 1217 aa18.73■□□□□ 0.59
NUCB1-201ENST00000405315 COL3A1P02461 1466 aaPredicted RBP18.73■□□□□ 0.59
NUCB1-201ENST00000405315 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
NUCB1-201ENST00000405315 PTPRMP28827 1452 aa18.72■□□□□ 0.59
NUCB1-201ENST00000405315 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
NUCB1-201ENST00000405315 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
NUCB1-201ENST00000405315 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
NUCB1-201ENST00000405315 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
NUCB1-201ENST00000405315 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
NUCB1-201ENST00000405315 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
NUCB1-201ENST00000405315 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
NUCB1-201ENST00000405315 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
NUCB1-201ENST00000405315 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
NUCB1-201ENST00000405315 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
NUCB1-201ENST00000405315 ATAD2Q6PL18 1390 aa18.7■□□□□ 0.58
NUCB1-201ENST00000405315 FTSJ3Q8IY81 847 aaKnown RBP18.7■□□□□ 0.58
NUCB1-201ENST00000405315 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
NUCB1-201ENST00000405315 SLC52A1Q9NWF4 448 aa18.7■□□□□ 0.58
NUCB1-201ENST00000405315 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
NUCB1-201ENST00000405315 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
NUCB1-201ENST00000405315 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms