RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
ATG4B-205ENST00000404914 PANK2Q9BZ23 570 aa19.9■□□□□ 0.78
ATG4B-205ENST00000404914 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
ATG4B-205ENST00000404914 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.78
ATG4B-205ENST00000404914 WWC1Q8IX03 1113 aa19.89■□□□□ 0.77
ATG4B-205ENST00000404914 CARD14Q9BXL6 1004 aa19.89■□□□□ 0.77
ATG4B-205ENST00000404914 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
ATG4B-205ENST00000404914 GZF1Q9H116 711 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-205ENST00000404914 TBC1D32Q96NH3 1257 aa19.88■□□□□ 0.77
ATG4B-205ENST00000404914 PDZRN3Q9UPQ7 1066 aa19.87■□□□□ 0.77
ATG4B-205ENST00000404914 PLXNC1O60486 1568 aa19.87■□□□□ 0.77
ATG4B-205ENST00000404914 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
ATG4B-205ENST00000404914 SCAF11Q99590 1463 aaKnown RBP19.87■□□□□ 0.77
ATG4B-205ENST00000404914 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
ATG4B-205ENST00000404914 ABCA6Q8N139 1617 aa19.85■□□□□ 0.77
ATG4B-205ENST00000404914 RTEL1-TNFRSF6BF6WH68 1400 aa19.85■□□□□ 0.77
ATG4B-205ENST00000404914 MLH3Q9UHC1 1453 aa19.84■□□□□ 0.77
ATG4B-205ENST00000404914 NPC1L1Q9UHC9 1359 aa19.84■□□□□ 0.77
ATG4B-205ENST00000404914 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
ATG4B-205ENST00000404914 CEP152O94986 1710 aa19.83■□□□□ 0.77
ATG4B-205ENST00000404914 L1TD1Q5T7N2 865 aaKnown RBP19.83■□□□□ 0.76
ATG4B-205ENST00000404914 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
ATG4B-205ENST00000404914 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
ATG4B-205ENST00000404914 FSD2A1L4K1 749 aa19.81■□□□□ 0.76
ATG4B-205ENST00000404914 TNNT2P45379 298 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-205ENST00000404914 KDM5AP29375 1690 aaKnown RBP19.8■□□□□ 0.76
ATG4B-205ENST00000404914 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
ATG4B-205ENST00000404914 DIP2CQ9Y2E4 1556 aa19.8■□□□□ 0.76
ATG4B-205ENST00000404914 MCM4P33991 863 aa19.8■□□□□ 0.76
ATG4B-205ENST00000404914 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
ATG4B-205ENST00000404914 GOLGA6L3A6NEY3 463 aa19.78■□□□□ 0.76
ATG4B-205ENST00000404914 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
ATG4B-205ENST00000404914 CFAP70Q5T0N1 1121 aa19.77■□□□□ 0.76
ATG4B-205ENST00000404914 CLTCL1P53675 1640 aa19.77■□□□□ 0.76
ATG4B-205ENST00000404914 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
ATG4B-205ENST00000404914 PMFBP1Q8TBY8 1022 aa19.77■□□□□ 0.76
ATG4B-205ENST00000404914 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
ATG4B-205ENST00000404914 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
ATG4B-205ENST00000404914 TCP11L2Q8N4U5 519 aa19.75■□□□□ 0.75
ATG4B-205ENST00000404914 MFAP1P55081 439 aaKnown RBP19.74■□□□□ 0.75
ATG4B-205ENST00000404914 NAP1L5Q96NT1 182 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-205ENST00000404914 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-205ENST00000404914 TRAK2O60296 914 aa19.73■□□□□ 0.75
ATG4B-205ENST00000404914 TRPM2O94759 1503 aa19.72■□□□□ 0.75
ATG4B-205ENST00000404914 KIF3BO15066 747 aa19.72■□□□□ 0.75
ATG4B-205ENST00000404914 C22orf23Q9BZE7 217 aa19.71■□□□□ 0.75
ATG4B-205ENST00000404914 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
ATG4B-205ENST00000404914 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-205ENST00000404914 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
ATG4B-205ENST00000404914 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
ATG4B-205ENST00000404914 ERBB4Q15303 1308 aa19.69■□□□□ 0.74
ATG4B-205ENST00000404914 ARHGEF40Q8TER5 1519 aa19.69■□□□□ 0.74
ATG4B-205ENST00000404914 CLCN1P35523 988 aa19.69■□□□□ 0.74
ATG4B-205ENST00000404914 RUNDC1Q96C34 613 aa19.69■□□□□ 0.74
ATG4B-205ENST00000404914 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-205ENST00000404914 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-205ENST00000404914 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
ATG4B-205ENST00000404914 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
ATG4B-205ENST00000404914 CHMP5Q9NZZ3 219 aa19.68■□□□□ 0.74
ATG4B-205ENST00000404914 MROH1Q8NDA8 1641 aa19.67■□□□□ 0.74
ATG4B-205ENST00000404914 PTPRTO14522 1441 aa19.67■□□□□ 0.74
ATG4B-205ENST00000404914 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
ATG4B-205ENST00000404914 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
ATG4B-205ENST00000404914 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
ATG4B-205ENST00000404914 ZMYM3Q14202 1370 aa19.65■□□□□ 0.74
ATG4B-205ENST00000404914 GGT6Q6P531 493 aa19.65■□□□□ 0.74
ATG4B-205ENST00000404914 SLC12A5Q9H2X9 1139 aa19.65■□□□□ 0.74
ATG4B-205ENST00000404914 DEPDC5O75140 1603 aa19.65■□□□□ 0.74
ATG4B-205ENST00000404914 TSR2Q969E8 191 aaKnown RBP19.65■□□□□ 0.74
ATG4B-205ENST00000404914 MTHFSP49914 203 aa19.63■□□□□ 0.73
ATG4B-205ENST00000404914 GRPEL1Q9HAV7 217 aa19.63■□□□□ 0.73
ATG4B-205ENST00000404914 GAS2L3Q86XJ1 694 aa19.63■□□□□ 0.73
ATG4B-205ENST00000404914 WDR63Q8IWG1 891 aa19.62■□□□□ 0.73
ATG4B-205ENST00000404914 MRE11P49959 708 aa19.62■□□□□ 0.73
ATG4B-205ENST00000404914 KIAA1210Q9ULL0 1709 aa19.61■□□□□ 0.73
ATG4B-205ENST00000404914 DZIP1LQ8IYY4 767 aaKnown RBP19.61■□□□□ 0.73
ATG4B-205ENST00000404914 AAMPQ13685 434 aa19.61■□□□□ 0.73
ATG4B-205ENST00000404914 MLECQ14165 292 aa19.6■□□□□ 0.73
ATG4B-205ENST00000404914 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
ATG4B-205ENST00000404914 DDIT3P35638 169 aa19.59■□□□□ 0.73
ATG4B-205ENST00000404914 ZKSCAN2Q63HK3 967 aa19.59■□□□□ 0.73
ATG4B-205ENST00000404914 TRIM27P14373 513 aa19.59■□□□□ 0.73
ATG4B-205ENST00000404914 REREQ9P2R6 1566 aa19.58■□□□□ 0.73
ATG4B-205ENST00000404914 HSCBQ8IWL3 235 aa19.58■□□□□ 0.72
ATG4B-205ENST00000404914 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
ATG4B-205ENST00000404914 ESPNB1AK53 854 aa19.57■□□□□ 0.72
ATG4B-205ENST00000404914 TNPO1Q92973 898 aaKnown RBP19.57■□□□□ 0.72
ATG4B-205ENST00000404914 TRAK1Q9UPV9 953 aa19.57■□□□□ 0.72
ATG4B-205ENST00000404914 EXOSC9Q06265 439 aaKnown RBP19.57■□□□□ 0.72
ATG4B-205ENST00000404914 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
ATG4B-205ENST00000404914 VWDEQ8N2E2 1590 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 FOXD4L1Q9NU39 408 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 VSIG10Q8N0Z9 540 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
ATG4B-205ENST00000404914 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
ATG4B-205ENST00000404914 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
ATG4B-205ENST00000404914 TET3O43151 1660 aa19.55■□□□□ 0.72
ATG4B-205ENST00000404914 CD2BP2O95400 341 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms