RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 SRPK2P78362 688 aaKnown RBP34.73■■■■□ 3.15
HIST2H3A-201ENST00000403683 CPS1P31327 1500 aa34.72■■■■□ 3.15
HIST2H3A-201ENST00000403683 ANP32CO43423 234 aa34.72■■■■□ 3.15
HIST2H3A-201ENST00000403683 KCNA6P17658 529 aa34.7■■■■□ 3.14
HIST2H3A-201ENST00000403683 CABP2Q9NPB3 220 aa34.7■■■■□ 3.14
HIST2H3A-201ENST00000403683 TMC1Q8TDI8 760 aa34.67■■■■□ 3.14
HIST2H3A-201ENST00000403683 CDK19Q9BWU1 502 aa34.67■■■■□ 3.14
HIST2H3A-201ENST00000403683 PANK3Q9H999 370 aa34.66■■■■□ 3.14
HIST2H3A-201ENST00000403683 TULP4Q9NRJ4 1543 aa34.66■■■■□ 3.14
HIST2H3A-201ENST00000403683 PUS7Q96PZ0 661 aaKnown RBP34.64■■■■□ 3.14
HIST2H3A-201ENST00000403683 PTCH1Q13635 1447 aa34.63■■■■□ 3.13
HIST2H3A-201ENST00000403683 CNGB1Q14028 1251 aaPredicted RBP34.61■■■■□ 3.13
HIST2H3A-201ENST00000403683 WASLO00401 505 aaPredicted RBP34.6■■■■□ 3.13
HIST2H3A-201ENST00000403683 XRN1Q8IZH2 1706 aaKnown RBP34.59■■■■□ 3.13
HIST2H3A-201ENST00000403683 CHD2O14647 1828 aaKnown RBP34.57■■■■□ 3.12
HIST2H3A-201ENST00000403683 SLC12A5Q9H2X9 1139 aa34.56■■■■□ 3.12
HIST2H3A-201ENST00000403683 ATAD2Q6PL18 1390 aa34.56■■■■□ 3.12
HIST2H3A-201ENST00000403683 KNSTRNQ9Y448 316 aa34.52■■■■□ 3.12
HIST2H3A-201ENST00000403683 RBM33Q96EV2 1170 aaKnown RBP34.5■■■■□ 3.11
HIST2H3A-201ENST00000403683 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.49■■■■□ 3.11
HIST2H3A-201ENST00000403683 MYOM1P52179 1685 aa34.49■■■■□ 3.11
HIST2H3A-201ENST00000403683 C14orf37Q86TY3 774 aa34.49■■■■□ 3.11
HIST2H3A-201ENST00000403683 PER1O15534 1290 aaPredicted RBP34.48■■■■□ 3.11
HIST2H3A-201ENST00000403683 PROSER2Q86WR7 435 aaPredicted RBP34.48■■■■□ 3.11
HIST2H3A-201ENST00000403683 STRCQ7RTU9 1775 aa34.47■■■■□ 3.11
HIST2H3A-201ENST00000403683 NUDT16Q96DE0 195 aaKnown RBP34.46■■■■□ 3.11
HIST2H3A-201ENST00000403683 NINLQ9Y2I6 1382 aa34.46■■■■□ 3.11
HIST2H3A-201ENST00000403683 NUTM2FA1L443 756 aa34.45■■■■□ 3.11
HIST2H3A-201ENST00000403683 PRKRIP1Q9H875 184 aaPredicted RBP34.45■■■■□ 3.11
HIST2H3A-201ENST00000403683 CABP1Q9NZU7 370 aa34.45■■■■□ 3.11
HIST2H3A-201ENST00000403683 DMRT2Q9Y5R5 561 aa34.43■■■■□ 3.1
HIST2H3A-201ENST00000403683 ADGRB2O60241 1585 aa34.42■■■■□ 3.1
HIST2H3A-201ENST00000403683 TERF2IPQ9NYB0 399 aa34.42■■■■□ 3.1
HIST2H3A-201ENST00000403683 NWD1Q149M9 1564 aa34.41■■■■□ 3.1
HIST2H3A-201ENST00000403683 CC2D1BQ5T0F9 858 aaKnown RBP34.41■■■■□ 3.1
HIST2H3A-201ENST00000403683 CCDC61Q9Y6R9 512 aa34.41■■■■□ 3.1
HIST2H3A-201ENST00000403683 HDGFL2Q7Z4V5 671 aaPredicted RBP34.39■■■■□ 3.1
HIST2H3A-201ENST00000403683 CARD14Q9BXL6 1004 aa34.39■■■■□ 3.1
HIST2H3A-201ENST00000403683 KTN1Q86UP2 1357 aaKnown RBP34.38■■■■□ 3.09
HIST2H3A-201ENST00000403683 ANKRD36BQ8N2N9 1353 aa34.38■■■■□ 3.09
HIST2H3A-201ENST00000403683 PPIP5K1Q6PFW1 1433 aa34.36■■■■□ 3.09
HIST2H3A-201ENST00000403683 NKTRP30414 1462 aaKnown RBP34.36■■■■□ 3.09
HIST2H3A-201ENST00000403683 PRR36Q9H6K5 1346 aa34.34■■■■□ 3.09
HIST2H3A-201ENST00000403683 NSD3Q9BZ95 1437 aa34.33■■■■□ 3.09
HIST2H3A-201ENST00000403683 CCER2I3L3R5 266 aa34.32■■■■□ 3.08
HIST2H3A-201ENST00000403683 RALBP1Q15311 655 aa34.32■■■■□ 3.08
HIST2H3A-201ENST00000403683 ADGRL3Q9HAR2 1447 aa34.31■■■■□ 3.08
HIST2H3A-201ENST00000403683 A0A1W2PP64 1363 aa34.31■■■■□ 3.08
HIST2H3A-201ENST00000403683 ATP7BP35670 1465 aa34.3■■■■□ 3.08
HIST2H3A-201ENST00000403683 AMER1Q5JTC6 1135 aaPredicted RBP34.3■■■■□ 3.08
HIST2H3A-201ENST00000403683 AEBP2Q6ZN18 517 aaPredicted RBP34.28■■■■□ 3.08
HIST2H3A-201ENST00000403683 ZNF335Q9H4Z2 1342 aaPredicted RBP34.28■■■■□ 3.08
HIST2H3A-201ENST00000403683 NALCNQ8IZF0 1738 aa34.27■■■■□ 3.08
HIST2H3A-201ENST00000403683 TMEM94Q12767 1356 aa34.27■■■■□ 3.08
HIST2H3A-201ENST00000403683 CGNL1Q0VF96 1302 aa34.26■■■■□ 3.08
HIST2H3A-201ENST00000403683 C19orf44Q9H6X5 657 aa34.25■■■■□ 3.07
HIST2H3A-201ENST00000403683 STRCP1A6NGW2 1772 aa34.24■■■■□ 3.07
HIST2H3A-201ENST00000403683 CD163L1Q9NR16 1453 aa34.23■■■■□ 3.07
HIST2H3A-201ENST00000403683 CDC42BPGQ6DT37 1551 aa34.22■■■■□ 3.07
HIST2H3A-201ENST00000403683 ANKARQ7Z5J8 1434 aa34.22■■■■□ 3.07
HIST2H3A-201ENST00000403683 PMFBP1Q8TBY8 1022 aa34.22■■■■□ 3.07
HIST2H3A-201ENST00000403683 ZNF692Q9BU19 519 aaPredicted RBP34.22■■■■□ 3.07
HIST2H3A-201ENST00000403683 NPC1L1Q9UHC9 1359 aa34.21■■■■□ 3.07
HIST2H3A-201ENST00000403683 PLEKHG3A1L390 1219 aa34.21■■■■□ 3.07
HIST2H3A-201ENST00000403683 PARD3Q8TEW0 1356 aa34.2■■■■□ 3.07
HIST2H3A-201ENST00000403683 MYBBP1AQ9BQG0 1328 aaKnown RBP34.2■■■■□ 3.07
HIST2H3A-201ENST00000403683 ATF3P18847 181 aa34.19■■■■□ 3.06
HIST2H3A-201ENST00000403683 NGDNQ8NEJ9 315 aaKnown RBP34.19■■■■□ 3.06
HIST2H3A-201ENST00000403683 ACEP12821 1306 aa34.19■■■■□ 3.06
HIST2H3A-201ENST00000403683 FMN2Q9NZ56 1722 aa34.18■■■■□ 3.06
HIST2H3A-201ENST00000403683 NCOA3Q9Y6Q9 1424 aa34.18■■■■□ 3.06
HIST2H3A-201ENST00000403683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.17■■■■□ 3.06
HIST2H3A-201ENST00000403683 MRS2Q9HD23 443 aa34.17■■■■□ 3.06
HIST2H3A-201ENST00000403683 CPSF1Q10570 1443 aaKnown RBP34.16■■■■□ 3.06
HIST2H3A-201ENST00000403683 USP32Q8NFA0 1604 aa34.16■■■■□ 3.06
HIST2H3A-201ENST00000403683 MORC1Q86VD1 984 aa34.15■■■■□ 3.06
HIST2H3A-201ENST00000403683 ESCO1Q5FWF5 840 aa34.14■■■■□ 3.06
HIST2H3A-201ENST00000403683 ITSN1Q15811 1721 aa34.13■■■■□ 3.05
HIST2H3A-201ENST00000403683 TOPAZ1Q8N9V7 1692 aa34.13■■■■□ 3.05
HIST2H3A-201ENST00000403683 MSH6P52701 1360 aa34.13■■■■□ 3.05
HIST2H3A-201ENST00000403683 CCDC184Q52MB2 194 aa34.11■■■■□ 3.05
HIST2H3A-201ENST00000403683 PHF8Q9UPP1 1060 aa34.11■■■■□ 3.05
HIST2H3A-201ENST00000403683 RGPD8O14715 1765 aaPredicted RBP34.11■■■■□ 3.05
HIST2H3A-201ENST00000403683 YTHDC1Q96MU7 727 aaKnown RBP34.1■■■■□ 3.05
HIST2H3A-201ENST00000403683 GGNBP2Q9H3C7 697 aa34.1■■■■□ 3.05
HIST2H3A-201ENST00000403683 EDC4Q6P2E9 1401 aaKnown RBP34.1■■■■□ 3.05
HIST2H3A-201ENST00000403683 NSD2O96028 1365 aa34.1■■■■□ 3.05
HIST2H3A-201ENST00000403683 CADPS2Q86UW7 1296 aa34.09■■■■□ 3.05
HIST2H3A-201ENST00000403683 NLRP13Q86W25 1043 aa34.09■■■■□ 3.05
HIST2H3A-201ENST00000403683 LRRC7Q96NW7 1537 aa34.09■■■■□ 3.05
HIST2H3A-201ENST00000403683 FYB1O15117 783 aa34.08■■■■□ 3.05
HIST2H3A-201ENST00000403683 TNNT2P45379 298 aaPredicted RBP34.08■■■■□ 3.05
HIST2H3A-201ENST00000403683 PPP2R1AP30153 589 aa34.06■■■■□ 3.04
HIST2H3A-201ENST00000403683 POLR3AO14802 1390 aaPredicted RBP34.04■■■■□ 3.04
HIST2H3A-201ENST00000403683 DCCP43146 1447 aa34.04■■■■□ 3.04
HIST2H3A-201ENST00000403683 ORAI2Q96SN7 254 aa34.03■■■■□ 3.04
HIST2H3A-201ENST00000403683 BRD4O60885 1362 aaPredicted RBP34.03■■■■□ 3.04
HIST2H3A-201ENST00000403683 USP6P35125 1406 aa34.03■■■■□ 3.04
HIST2H3A-201ENST00000403683 AKAP12Q02952 1782 aa34.03■■■■□ 3.04
HIST2H3A-201ENST00000403683 TTC21BQ7Z4L5 1316 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms