RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 GOLIM4O00461 696 aa7.32□□□□□ -1.24
CNGA1-202ENST00000402813 CALR3Q96L12 384 aaKnown RBP7.32□□□□□ -1.24
CNGA1-202ENST00000402813 RPGRIP1LQ68CZ1 1315 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 FBXO9Q9UK97 447 aaPredicted RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 TBX22Q9Y458 520 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 TOP2AP11388 1531 aaKnown RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 SPDYE2BA6NHP3 402 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 WDHD1O75717 1129 aaPredicted RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 SPDYE6P0CI01 402 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 SPDYE2Q495Y8 402 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 TRIM44Q96DX7 344 aaPredicted RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 FEZ2Q9UHY8 353 aaPredicted RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 NOP58Q9Y2X3 529 aaKnown RBP7.31□□□□□ -1.24
CNGA1-202ENST00000402813 DMRT2Q9Y5R5 561 aa7.31□□□□□ -1.24
CNGA1-202ENST00000402813 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
CNGA1-202ENST00000402813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
CNGA1-202ENST00000402813 OTUD6BQ8N6M0 293 aa7.3□□□□□ -1.24
CNGA1-202ENST00000402813 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
CNGA1-202ENST00000402813 NRBP1Q9UHY1 535 aa7.3□□□□□ -1.24
CNGA1-202ENST00000402813 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
CNGA1-202ENST00000402813 ZKSCAN2Q63HK3 967 aa7.3□□□□□ -1.24
CNGA1-202ENST00000402813 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
CNGA1-202ENST00000402813 SNRNP27Q8WVK2 155 aaKnown RBP7.3□□□□□ -1.24
CNGA1-202ENST00000402813 TMEM88BA6NKF7 163 aa7.29□□□□□ -1.24
CNGA1-202ENST00000402813 PCGF5Q86SE9 256 aa7.29□□□□□ -1.24
CNGA1-202ENST00000402813 MIER1Q8N108 512 aa7.29□□□□□ -1.24
CNGA1-202ENST00000402813 FRMD4BQ9Y2L6 1034 aa7.29□□□□□ -1.24
CNGA1-202ENST00000402813 RECKO95980 971 aa7.29□□□□□ -1.24
CNGA1-202ENST00000402813 POLD1P28340 1107 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 HDAC1Q13547 482 aaPredicted RBP7.28□□□□□ -1.24
CNGA1-202ENST00000402813 MSL3Q8N5Y2 521 aaKnown RBP7.28□□□□□ -1.24
CNGA1-202ENST00000402813 GLMNQ92990 594 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 GOLGA6CA6NDK9 693 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 GOLGA6BA6NDN3 693 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 GOLGA6DP0CG33 693 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 SH3D19Q5HYK7 790 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 ARMCX6Q7L4S7 300 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 GOLGA6AQ9NYA3 693 aa7.28□□□□□ -1.24
CNGA1-202ENST00000402813 STK10O94804 968 aaKnown RBP7.27□□□□□ -1.25
CNGA1-202ENST00000402813 IBSPP21815 317 aaPredicted RBP7.27□□□□□ -1.25
CNGA1-202ENST00000402813 DDX46Q7L014 1031 aaKnown RBP7.27□□□□□ -1.25
CNGA1-202ENST00000402813 GET4Q7L5D6 327 aaPredicted RBP7.27□□□□□ -1.25
CNGA1-202ENST00000402813 NLGN1Q8N2Q7 840 aa7.27□□□□□ -1.25
CNGA1-202ENST00000402813 WWC3Q9ULE0 1092 aa7.27□□□□□ -1.25
CNGA1-202ENST00000402813 SOX12O15370 315 aa7.27□□□□□ -1.25
CNGA1-202ENST00000402813 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
CNGA1-202ENST00000402813 HDAC5Q9UQL6 1122 aa7.27□□□□□ -1.25
CNGA1-202ENST00000402813 GSE1Q14687 1217 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 PLEKHG6Q3KR16 790 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 TPX2Q9ULW0 747 aaKnown RBP7.26□□□□□ -1.25
CNGA1-202ENST00000402813 DHX16O60231 1041 aaKnown RBP7.26□□□□□ -1.25
CNGA1-202ENST00000402813 TBX4P57082 545 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 EVA1CP58658 441 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 NBPF9Q3BBW0 867 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 GPR37O15354 613 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 POU5F1Q01860 360 aaKnown RBP7.26□□□□□ -1.25
CNGA1-202ENST00000402813 OXER1Q8TDS5 423 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 IRF2BPLQ9H1B7 796 aa7.26□□□□□ -1.25
CNGA1-202ENST00000402813 ZBTB47Q9UFB7 747 aaPredicted RBP7.26□□□□□ -1.25
CNGA1-202ENST00000402813 BAZ1BQ9UIG0 1483 aaKnown RBP7.25□□□□□ -1.25
CNGA1-202ENST00000402813 KIF21BO75037 1637 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 HOXA2O43364 376 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 SCP2P22307 547 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 BIRC2Q13490 618 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 CFAP70Q5T0N1 1121 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 RPS6KC1Q96S38 1066 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 MINK1Q8N4C8 1332 aaPredicted RBP7.25□□□□□ -1.25
CNGA1-202ENST00000402813 PUS10Q3MIT2 529 aaKnown RBP7.25□□□□□ -1.25
CNGA1-202ENST00000402813 ICE2Q659A1 982 aa7.25□□□□□ -1.25
CNGA1-202ENST00000402813 ANP32BQ92688 251 aaKnown RBP7.25□□□□□ -1.25
CNGA1-202ENST00000402813 CCDC189A1A4V9 331 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 C7P10643 843 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 CCDC144BQ3MJ40 725 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 EGFL6Q8IUX8 553 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
CNGA1-202ENST00000402813 ERBB3P21860 1342 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.24□□□□□ -1.25
CNGA1-202ENST00000402813 PSEN1P49768 467 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
CNGA1-202ENST00000402813 MARSP56192 900 aaKnown RBP7.23□□□□□ -1.25
CNGA1-202ENST00000402813 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
CNGA1-202ENST00000402813 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
CNGA1-202ENST00000402813 INO80BQ9C086 356 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-202ENST00000402813 POM121CA8CG34 1229 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 ATG7O95352 703 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-202ENST00000402813 MLLT3P42568 568 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-202ENST00000402813 EPAS1Q99814 870 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 CARD10Q9BWT7 1032 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
CNGA1-202ENST00000402813 PRR12Q9ULL5 1215 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 VDRP11473 427 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 PIF1Q9H611 641 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 SPC25Q9HBM1 224 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 SCINQ9Y6U3 715 aa7.22□□□□□ -1.25
CNGA1-202ENST00000402813 SMARCA2P51531 1590 aa7.21□□□□□ -1.25
CNGA1-202ENST00000402813 CREBRFQ8IUR6 639 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms