RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 NPC1L1Q9UHC9 1359 aa18.26■□□□□ 0.51
ATG3-202ENST00000402314 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
ATG3-202ENST00000402314 IDI1Q13907 227 aa18.25■□□□□ 0.51
ATG3-202ENST00000402314 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
ATG3-202ENST00000402314 MTHFSP49914 203 aa18.23■□□□□ 0.51
ATG3-202ENST00000402314 POGKQ9P215 609 aa18.23■□□□□ 0.51
ATG3-202ENST00000402314 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
ATG3-202ENST00000402314 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
ATG3-202ENST00000402314 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
ATG3-202ENST00000402314 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
ATG3-202ENST00000402314 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 LMTK2Q8IWU2 1503 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 SPRYD3Q8NCJ5 442 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 C8orf34Q49A92 452 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
ATG3-202ENST00000402314 IFT172Q9UG01 1749 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
ATG3-202ENST00000402314 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 E9PSI1 815 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 ABCC3O15438 1527 aa18.19■□□□□ 0.5
ATG3-202ENST00000402314 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
ATG3-202ENST00000402314 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
ATG3-202ENST00000402314 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
ATG3-202ENST00000402314 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
ATG3-202ENST00000402314 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
ATG3-202ENST00000402314 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
ATG3-202ENST00000402314 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
ATG3-202ENST00000402314 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
ATG3-202ENST00000402314 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
ATG3-202ENST00000402314 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
ATG3-202ENST00000402314 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
ATG3-202ENST00000402314 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
ATG3-202ENST00000402314 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
ATG3-202ENST00000402314 GGNBP2Q9H3C7 697 aa18.15■□□□□ 0.5
ATG3-202ENST00000402314 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
ATG3-202ENST00000402314 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
ATG3-202ENST00000402314 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
ATG3-202ENST00000402314 SIGLEC1Q9BZZ2 1709 aa18.14■□□□□ 0.5
ATG3-202ENST00000402314 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
ATG3-202ENST00000402314 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
ATG3-202ENST00000402314 IGHDP01880 384 aa18.14■□□□□ 0.49
ATG3-202ENST00000402314 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
ATG3-202ENST00000402314 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
ATG3-202ENST00000402314 EVC2Q86UK5 1308 aa18.13■□□□□ 0.49
ATG3-202ENST00000402314 RPGRIP1LQ68CZ1 1315 aa18.13■□□□□ 0.49
ATG3-202ENST00000402314 SEC24BO95487 1268 aa18.13■□□□□ 0.49
ATG3-202ENST00000402314 PPLO60437 1756 aa18.13■□□□□ 0.49
ATG3-202ENST00000402314 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
ATG3-202ENST00000402314 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
ATG3-202ENST00000402314 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
ATG3-202ENST00000402314 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
ATG3-202ENST00000402314 FBLN1P23142 703 aa18.11■□□□□ 0.49
ATG3-202ENST00000402314 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
ATG3-202ENST00000402314 SETBP1Q9Y6X0 1596 aa18.1■□□□□ 0.49
ATG3-202ENST00000402314 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
ATG3-202ENST00000402314 MLECQ14165 292 aa18.09■□□□□ 0.49
ATG3-202ENST00000402314 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
ATG3-202ENST00000402314 TULP4Q9NRJ4 1543 aa18.09■□□□□ 0.49
ATG3-202ENST00000402314 GLI2P10070 1586 aa18.08■□□□□ 0.48
ATG3-202ENST00000402314 RLBP1P12271 317 aa18.08■□□□□ 0.48
ATG3-202ENST00000402314 CFAP53Q96M91 514 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 CAMSAP1Q5T5Y3 1602 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
ATG3-202ENST00000402314 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 FAM43AQ8N2R8 423 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
ATG3-202ENST00000402314 A0A1W2PP64 1363 aa18.06■□□□□ 0.48
ATG3-202ENST00000402314 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
ATG3-202ENST00000402314 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
ATG3-202ENST00000402314 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
ATG3-202ENST00000402314 NAP1L5Q96NT1 182 aaPredicted RBP18.05■□□□□ 0.48
ATG3-202ENST00000402314 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
ATG3-202ENST00000402314 NEO1Q92859 1461 aa18.04■□□□□ 0.48
ATG3-202ENST00000402314 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
ATG3-202ENST00000402314 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
ATG3-202ENST00000402314 CFAP74Q9C0B2 1584 aa18.03■□□□□ 0.48
ATG3-202ENST00000402314 WAPLQ7Z5K2 1190 aa18.03■□□□□ 0.48
ATG3-202ENST00000402314 ZC3H13Q5T200 1668 aaKnown RBP18.02■□□□□ 0.48
ATG3-202ENST00000402314 FYB1O15117 783 aa18.02■□□□□ 0.48
ATG3-202ENST00000402314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
ATG3-202ENST00000402314 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
ATG3-202ENST00000402314 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
ATG3-202ENST00000402314 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
ATG3-202ENST00000402314 PCDHB15Q9Y5E8 787 aa18.01■□□□□ 0.47
ATG3-202ENST00000402314 PIK3C2BO00750 1634 aa18■□□□□ 0.47
ATG3-202ENST00000402314 PDE3AQ14432 1141 aa18■□□□□ 0.47
ATG3-202ENST00000402314 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
ATG3-202ENST00000402314 CDK19Q9BWU1 502 aa17.99■□□□□ 0.47
ATG3-202ENST00000402314 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
ATG3-202ENST00000402314 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
ATG3-202ENST00000402314 MYO5BQ9ULV0 1848 aa17.99■□□□□ 0.47
ATG3-202ENST00000402314 IQSEC2Q5JU85 1478 aa17.98■□□□□ 0.47
ATG3-202ENST00000402314 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
ATG3-202ENST00000402314 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
ATG3-202ENST00000402314 USP19O94966 1318 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms