RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
LINC02408-201ENST00000400306 TONSLQ96HA7 1378 aa11.27□□□□□ -0.61
LINC02408-201ENST00000400306 PPLO60437 1756 aa11.27□□□□□ -0.61
LINC02408-201ENST00000400306 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
LINC02408-201ENST00000400306 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
LINC02408-201ENST00000400306 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
LINC02408-201ENST00000400306 L3MBTL2Q969R5 705 aa11.26□□□□□ -0.61
LINC02408-201ENST00000400306 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
LINC02408-201ENST00000400306 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
LINC02408-201ENST00000400306 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
LINC02408-201ENST00000400306 RIMS2Q9UQ26 1411 aa11.23□□□□□ -0.61
LINC02408-201ENST00000400306 DCAF11Q8TEB1 546 aa11.23□□□□□ -0.61
LINC02408-201ENST00000400306 JCADQ9P266 1359 aa11.22□□□□□ -0.61
LINC02408-201ENST00000400306 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
LINC02408-201ENST00000400306 SCAF11Q99590 1463 aaKnown RBP11.21□□□□□ -0.61
LINC02408-201ENST00000400306 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
LINC02408-201ENST00000400306 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
LINC02408-201ENST00000400306 SHPRHQ149N8 1683 aa11.21□□□□□ -0.62
LINC02408-201ENST00000400306 ZFYVE9O95405 1425 aa11.21□□□□□ -0.62
LINC02408-201ENST00000400306 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
LINC02408-201ENST00000400306 SLIT1O75093 1534 aa11.2□□□□□ -0.62
LINC02408-201ENST00000400306 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
LINC02408-201ENST00000400306 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
LINC02408-201ENST00000400306 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
LINC02408-201ENST00000400306 LRP6O75581 1613 aa11.19□□□□□ -0.62
LINC02408-201ENST00000400306 MYOM2P54296 1465 aa11.19□□□□□ -0.62
LINC02408-201ENST00000400306 LTKP29376 864 aa11.18□□□□□ -0.62
LINC02408-201ENST00000400306 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
LINC02408-201ENST00000400306 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
LINC02408-201ENST00000400306 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
LINC02408-201ENST00000400306 TXNDC2Q86VQ3 553 aa11.18□□□□□ -0.62
LINC02408-201ENST00000400306 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
LINC02408-201ENST00000400306 RPGRIP1LQ68CZ1 1315 aa11.18□□□□□ -0.62
LINC02408-201ENST00000400306 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
LINC02408-201ENST00000400306 PRAG1Q86YV5 1406 aa11.17□□□□□ -0.62
LINC02408-201ENST00000400306 TMEM94Q12767 1356 aa11.17□□□□□ -0.62
LINC02408-201ENST00000400306 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
LINC02408-201ENST00000400306 NRXN1Q9ULB1 1477 aa11.16□□□□□ -0.62
LINC02408-201ENST00000400306 RXRBP28702 533 aa11.16□□□□□ -0.62
LINC02408-201ENST00000400306 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
LINC02408-201ENST00000400306 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
LINC02408-201ENST00000400306 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC02408-201ENST00000400306 BCANQ96GW7 911 aa11.15□□□□□ -0.62
LINC02408-201ENST00000400306 PHF12Q96QT6 1004 aa11.15□□□□□ -0.62
LINC02408-201ENST00000400306 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
LINC02408-201ENST00000400306 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
LINC02408-201ENST00000400306 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
LINC02408-201ENST00000400306 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
LINC02408-201ENST00000400306 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
LINC02408-201ENST00000400306 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
LINC02408-201ENST00000400306 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
LINC02408-201ENST00000400306 NWD1Q149M9 1564 aa11.13□□□□□ -0.63
LINC02408-201ENST00000400306 SETBP1Q9Y6X0 1596 aa11.13□□□□□ -0.63
LINC02408-201ENST00000400306 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
LINC02408-201ENST00000400306 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
LINC02408-201ENST00000400306 LAMC1P11047 1609 aa11.12□□□□□ -0.63
LINC02408-201ENST00000400306 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
LINC02408-201ENST00000400306 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
LINC02408-201ENST00000400306 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 SLC26A8Q96RN1 970 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 CHD2O14647 1828 aaKnown RBP11.11□□□□□ -0.63
LINC02408-201ENST00000400306 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 SRCAPQ6ZRS2 3230 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
LINC02408-201ENST00000400306 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
LINC02408-201ENST00000400306 MSH6P52701 1360 aa11.1□□□□□ -0.63
LINC02408-201ENST00000400306 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
LINC02408-201ENST00000400306 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
LINC02408-201ENST00000400306 RGS12O14924 1447 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
LINC02408-201ENST00000400306 KCNA6P17658 529 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 C14orf93Q9H972 538 aaKnown RBP11.09□□□□□ -0.63
LINC02408-201ENST00000400306 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
LINC02408-201ENST00000400306 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
LINC02408-201ENST00000400306 METP08581 1390 aa11.08□□□□□ -0.64
LINC02408-201ENST00000400306 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
LINC02408-201ENST00000400306 DIP2AQ14689 1571 aa11.08□□□□□ -0.64
LINC02408-201ENST00000400306 NUBP1P53384 320 aa11.08□□□□□ -0.64
LINC02408-201ENST00000400306 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
LINC02408-201ENST00000400306 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
LINC02408-201ENST00000400306 STK26Q9P289 416 aa11.06□□□□□ -0.64
LINC02408-201ENST00000400306 PTPRUQ92729 1446 aa11.06□□□□□ -0.64
LINC02408-201ENST00000400306 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.06□□□□□ -0.64
LINC02408-201ENST00000400306 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
LINC02408-201ENST00000400306 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
LINC02408-201ENST00000400306 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
LINC02408-201ENST00000400306 CARD11Q9BXL7 1154 aa11.05□□□□□ -0.64
LINC02408-201ENST00000400306 AFF2P51816 1311 aa11.05□□□□□ -0.64
LINC02408-201ENST00000400306 LRP5O75197 1615 aa11.05□□□□□ -0.64
LINC02408-201ENST00000400306 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
LINC02408-201ENST00000400306 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
LINC02408-201ENST00000400306 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
LINC02408-201ENST00000400306 YTHDC2Q9H6S0 1430 aaKnown RBP11.04□□□□□ -0.64
LINC02408-201ENST00000400306 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
LINC02408-201ENST00000400306 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
LINC02408-201ENST00000400306 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms