RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
SIRPA-203ENST00000400068 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
SIRPA-203ENST00000400068 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
SIRPA-203ENST00000400068 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
SIRPA-203ENST00000400068 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
SIRPA-203ENST00000400068 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
SIRPA-203ENST00000400068 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
SIRPA-203ENST00000400068 FAM161AQ3B820 660 aa17.1■□□□□ 0.33
SIRPA-203ENST00000400068 RRS1Q15050 365 aaKnown RBP17.09■□□□□ 0.33
SIRPA-203ENST00000400068 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
SIRPA-203ENST00000400068 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
SIRPA-203ENST00000400068 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
SIRPA-203ENST00000400068 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
SIRPA-203ENST00000400068 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
SIRPA-203ENST00000400068 DZIP1LQ8IYY4 767 aaKnown RBP17.08■□□□□ 0.32
SIRPA-203ENST00000400068 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
SIRPA-203ENST00000400068 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
SIRPA-203ENST00000400068 CHD1O14646 1710 aa17.05■□□□□ 0.32
SIRPA-203ENST00000400068 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
SIRPA-203ENST00000400068 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
SIRPA-203ENST00000400068 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
SIRPA-203ENST00000400068 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
SIRPA-203ENST00000400068 BACH2Q9BYV9 841 aa17.02■□□□□ 0.31
SIRPA-203ENST00000400068 NME9Q86XW9 330 aa17.01■□□□□ 0.31
SIRPA-203ENST00000400068 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
SIRPA-203ENST00000400068 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
SIRPA-203ENST00000400068 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
SIRPA-203ENST00000400068 TNNQ9UQP3 1299 aa17■□□□□ 0.31
SIRPA-203ENST00000400068 DCTN1Q14203 1278 aa17■□□□□ 0.31
SIRPA-203ENST00000400068 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
SIRPA-203ENST00000400068 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
SIRPA-203ENST00000400068 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
SIRPA-203ENST00000400068 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
SIRPA-203ENST00000400068 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
SIRPA-203ENST00000400068 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
SIRPA-203ENST00000400068 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
SIRPA-203ENST00000400068 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIRPA-203ENST00000400068 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
SIRPA-203ENST00000400068 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 NCLP19338 710 aaKnown RBP16.97■□□□□ 0.31
SIRPA-203ENST00000400068 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
SIRPA-203ENST00000400068 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
SIRPA-203ENST00000400068 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
SIRPA-203ENST00000400068 NLRP6P59044 892 aa16.96■□□□□ 0.31
SIRPA-203ENST00000400068 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
SIRPA-203ENST00000400068 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
SIRPA-203ENST00000400068 BCL11BQ9C0K0 894 aaPredicted RBP16.95■□□□□ 0.3
SIRPA-203ENST00000400068 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 KDM5CP41229 1560 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
SIRPA-203ENST00000400068 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
SIRPA-203ENST00000400068 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
SIRPA-203ENST00000400068 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
SIRPA-203ENST00000400068 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
SIRPA-203ENST00000400068 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
SIRPA-203ENST00000400068 FYB1O15117 783 aa16.93■□□□□ 0.3
SIRPA-203ENST00000400068 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
SIRPA-203ENST00000400068 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
SIRPA-203ENST00000400068 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
SIRPA-203ENST00000400068 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
SIRPA-203ENST00000400068 IGHDP01880 384 aa16.92■□□□□ 0.3
SIRPA-203ENST00000400068 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
SIRPA-203ENST00000400068 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
SIRPA-203ENST00000400068 MIS18AQ9NYP9 233 aa16.92■□□□□ 0.3
SIRPA-203ENST00000400068 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
SIRPA-203ENST00000400068 ATP10AO60312 1499 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
SIRPA-203ENST00000400068 GNAI1P63096 354 aa16.9■□□□□ 0.3
SIRPA-203ENST00000400068 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
SIRPA-203ENST00000400068 XPCQ01831 940 aaPredicted RBP16.89■□□□□ 0.29
SIRPA-203ENST00000400068 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
SIRPA-203ENST00000400068 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
SIRPA-203ENST00000400068 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
SIRPA-203ENST00000400068 NKTRP30414 1462 aaKnown RBP16.88■□□□□ 0.29
SIRPA-203ENST00000400068 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
SIRPA-203ENST00000400068 ATF7IPQ6VMQ6 1270 aa16.88■□□□□ 0.29
SIRPA-203ENST00000400068 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
SIRPA-203ENST00000400068 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
SIRPA-203ENST00000400068 MCM10Q7L590 875 aa16.87■□□□□ 0.29
SIRPA-203ENST00000400068 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
SIRPA-203ENST00000400068 PSME1Q06323 249 aa16.87■□□□□ 0.29
SIRPA-203ENST00000400068 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
SIRPA-203ENST00000400068 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms