RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 TICAM2Q86XR7 235 aa13.5□□□□□ -0.25
CACNA1C-206ENST00000399595 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-206ENST00000399595 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-206ENST00000399595 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
CACNA1C-206ENST00000399595 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CACNA1C-206ENST00000399595 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CACNA1C-206ENST00000399595 GOLGA6L7A0A1B0GV03 622 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 GRM1Q13255 1194 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 ERICH4A6NGS2 130 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 FAM193AP78312 1265 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 TRIM29Q14134 588 aa13.48□□□□□ -0.25
CACNA1C-206ENST00000399595 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 USP8P40818 1118 aa13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-206ENST00000399595 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
CACNA1C-206ENST00000399595 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
CACNA1C-206ENST00000399595 PLIN1O60240 522 aa13.46□□□□□ -0.25
CACNA1C-206ENST00000399595 PDE4AP27815 886 aa13.46□□□□□ -0.26
CACNA1C-206ENST00000399595 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
CACNA1C-206ENST00000399595 OFD1O75665 1012 aa13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 NEBLO76041 1014 aa13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CACNA1C-206ENST00000399595 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-206ENST00000399595 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
CACNA1C-206ENST00000399595 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
CACNA1C-206ENST00000399595 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
CACNA1C-206ENST00000399595 NASPP49321 788 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-206ENST00000399595 ERICH2A1L162 156 aa13.43□□□□□ -0.26
CACNA1C-206ENST00000399595 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
CACNA1C-206ENST00000399595 CBX1P83916 185 aa13.42□□□□□ -0.26
CACNA1C-206ENST00000399595 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-206ENST00000399595 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
CACNA1C-206ENST00000399595 GOLGA6L10A6NI86 522 aa13.42□□□□□ -0.26
CACNA1C-206ENST00000399595 GOLGA6L10A0A0M3HER8 536 aa13.41□□□□□ -0.26
CACNA1C-206ENST00000399595 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-206ENST00000399595 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
CACNA1C-206ENST00000399595 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-206ENST00000399595 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
CACNA1C-206ENST00000399595 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
CACNA1C-206ENST00000399595 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
CACNA1C-206ENST00000399595 UQCRHP07919 91 aa13.4□□□□□ -0.26
CACNA1C-206ENST00000399595 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 MRE11P49959 708 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 TNNT1P13805 278 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 SYCP1Q15431 976 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
CACNA1C-206ENST00000399595 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 ERLIN2O94905 339 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 PRDM10Q9NQV6 1147 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 TRDNQ13061 729 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
CACNA1C-206ENST00000399595 CCP110O43303 1012 aa13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 ANKRD45Q5TZF3 282 aa13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-206ENST00000399595 SMC2O95347 1197 aa13.36□□□□□ -0.27
CACNA1C-206ENST00000399595 RALBP1Q15311 655 aa13.36□□□□□ -0.27
CACNA1C-206ENST00000399595 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
CACNA1C-206ENST00000399595 NLRP6P59044 892 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms