RNA–Protein interactions for RNA: ENST00000399591.5

CACNA1C-205, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-205ENST00000399591 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 TICAM2Q86XR7 235 aa13.5□□□□□ -0.25
CACNA1C-205ENST00000399591 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-205ENST00000399591 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-205ENST00000399591 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
CACNA1C-205ENST00000399591 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CACNA1C-205ENST00000399591 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CACNA1C-205ENST00000399591 GOLGA6L7A0A1B0GV03 622 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 GRM1Q13255 1194 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 ERICH4A6NGS2 130 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 FAM193AP78312 1265 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 TRIM29Q14134 588 aa13.48□□□□□ -0.25
CACNA1C-205ENST00000399591 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 USP8P40818 1118 aa13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-205ENST00000399591 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
CACNA1C-205ENST00000399591 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
CACNA1C-205ENST00000399591 PLIN1O60240 522 aa13.46□□□□□ -0.25
CACNA1C-205ENST00000399591 PDE4AP27815 886 aa13.46□□□□□ -0.26
CACNA1C-205ENST00000399591 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
CACNA1C-205ENST00000399591 OFD1O75665 1012 aa13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 NEBLO76041 1014 aa13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CACNA1C-205ENST00000399591 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-205ENST00000399591 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
CACNA1C-205ENST00000399591 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
CACNA1C-205ENST00000399591 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
CACNA1C-205ENST00000399591 NASPP49321 788 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-205ENST00000399591 ERICH2A1L162 156 aa13.43□□□□□ -0.26
CACNA1C-205ENST00000399591 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
CACNA1C-205ENST00000399591 CBX1P83916 185 aa13.42□□□□□ -0.26
CACNA1C-205ENST00000399591 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-205ENST00000399591 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
CACNA1C-205ENST00000399591 GOLGA6L10A6NI86 522 aa13.42□□□□□ -0.26
CACNA1C-205ENST00000399591 GOLGA6L10A0A0M3HER8 536 aa13.41□□□□□ -0.26
CACNA1C-205ENST00000399591 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-205ENST00000399591 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
CACNA1C-205ENST00000399591 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-205ENST00000399591 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
CACNA1C-205ENST00000399591 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
CACNA1C-205ENST00000399591 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
CACNA1C-205ENST00000399591 UQCRHP07919 91 aa13.4□□□□□ -0.26
CACNA1C-205ENST00000399591 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 MRE11P49959 708 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 TNNT1P13805 278 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 SYCP1Q15431 976 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
CACNA1C-205ENST00000399591 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 ERLIN2O94905 339 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 PRDM10Q9NQV6 1147 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 TRDNQ13061 729 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
CACNA1C-205ENST00000399591 CCP110O43303 1012 aa13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 ANKRD45Q5TZF3 282 aa13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-205ENST00000399591 SMC2O95347 1197 aa13.36□□□□□ -0.27
CACNA1C-205ENST00000399591 RALBP1Q15311 655 aa13.36□□□□□ -0.27
CACNA1C-205ENST00000399591 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
CACNA1C-205ENST00000399591 NLRP6P59044 892 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms