RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-203ENST00000399516 MBD3O95983 291 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 GNAI1P63096 354 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.24
LAMA3-203ENST00000399516 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 AKNAQ7Z591 1439 aa13.58□□□□□ -0.24
LAMA3-203ENST00000399516 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
LAMA3-203ENST00000399516 TRDNQ13061 729 aa13.57□□□□□ -0.24
LAMA3-203ENST00000399516 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
LAMA3-203ENST00000399516 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
LAMA3-203ENST00000399516 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
LAMA3-203ENST00000399516 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
LAMA3-203ENST00000399516 HSP90AB4PQ58FF6 505 aa13.56□□□□□ -0.24
LAMA3-203ENST00000399516 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
LAMA3-203ENST00000399516 PKNOX2Q96KN3 472 aa13.56□□□□□ -0.24
LAMA3-203ENST00000399516 NAP1L1P55209 391 aaKnown RBP13.56□□□□□ -0.24
LAMA3-203ENST00000399516 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
LAMA3-203ENST00000399516 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
LAMA3-203ENST00000399516 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
LAMA3-203ENST00000399516 CCP110O43303 1012 aa13.56□□□□□ -0.24
LAMA3-203ENST00000399516 TRIM5Q9C035 493 aa13.55□□□□□ -0.24
LAMA3-203ENST00000399516 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
LAMA3-203ENST00000399516 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
LAMA3-203ENST00000399516 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
LAMA3-203ENST00000399516 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
LAMA3-203ENST00000399516 RABEP1Q15276 862 aa13.55□□□□□ -0.24
LAMA3-203ENST00000399516 PDILTQ8N807 584 aa13.54□□□□□ -0.24
LAMA3-203ENST00000399516 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
LAMA3-203ENST00000399516 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
LAMA3-203ENST00000399516 PSMA5P28066 241 aa13.54□□□□□ -0.24
LAMA3-203ENST00000399516 RRP12Q5JTH9 1297 aaKnown RBP13.54□□□□□ -0.24
LAMA3-203ENST00000399516 ERICH2A1L162 156 aa13.53□□□□□ -0.24
LAMA3-203ENST00000399516 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
LAMA3-203ENST00000399516 SMC2O95347 1197 aa13.53□□□□□ -0.24
LAMA3-203ENST00000399516 ERCC4Q92889 916 aaPredicted RBP13.52□□□□□ -0.24
LAMA3-203ENST00000399516 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
LAMA3-203ENST00000399516 CNTROBQ8N137 903 aa13.52□□□□□ -0.25
LAMA3-203ENST00000399516 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
LAMA3-203ENST00000399516 H0YHG0 523 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
LAMA3-203ENST00000399516 KINO60870 393 aaKnown RBP13.51□□□□□ -0.25
LAMA3-203ENST00000399516 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
LAMA3-203ENST00000399516 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
LAMA3-203ENST00000399516 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
LAMA3-203ENST00000399516 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 RAD21O60216 631 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
LAMA3-203ENST00000399516 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
LAMA3-203ENST00000399516 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
LAMA3-203ENST00000399516 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
LAMA3-203ENST00000399516 FANCD2Q9BXW9 1451 aa13.5□□□□□ -0.25
LAMA3-203ENST00000399516 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
LAMA3-203ENST00000399516 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
LAMA3-203ENST00000399516 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
LAMA3-203ENST00000399516 VPS37DQ86XT2 251 aa13.5□□□□□ -0.25
LAMA3-203ENST00000399516 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
LAMA3-203ENST00000399516 MCM2P49736 904 aa13.49□□□□□ -0.25
LAMA3-203ENST00000399516 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
LAMA3-203ENST00000399516 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
LAMA3-203ENST00000399516 HMOX1P09601 288 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 PDCP20941 246 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 FSD1Q9BTV5 496 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 LEKR1Q6ZMV7 388 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 EPS15P42566 896 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 GRPEL1Q9HAV7 217 aa13.48□□□□□ -0.25
LAMA3-203ENST00000399516 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 FIBPO43427 364 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 RDXP35241 583 aaKnown RBP13.47□□□□□ -0.25
LAMA3-203ENST00000399516 NEK4P51957 841 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 TTLL5Q6EMB2 1281 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
LAMA3-203ENST00000399516 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 UQCRHLA0A096LP55 91 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 UQCRHP07919 91 aa13.47□□□□□ -0.25
LAMA3-203ENST00000399516 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 MYO6Q9UM54 1294 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
LAMA3-203ENST00000399516 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
LAMA3-203ENST00000399516 CCDC43Q96MW1 224 aaKnown RBP13.45□□□□□ -0.26
LAMA3-203ENST00000399516 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
LAMA3-203ENST00000399516 PTPRGP23470 1445 aa13.45□□□□□ -0.26
LAMA3-203ENST00000399516 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
LAMA3-203ENST00000399516 DHX8Q14562 1220 aaKnown RBP13.44□□□□□ -0.26
LAMA3-203ENST00000399516 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
LAMA3-203ENST00000399516 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
LAMA3-203ENST00000399516 RRP9O43818 475 aaKnown RBP13.44□□□□□ -0.26
LAMA3-203ENST00000399516 XBP1P17861 261 aa13.44□□□□□ -0.26
LAMA3-203ENST00000399516 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
LAMA3-203ENST00000399516 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
LAMA3-203ENST00000399516 PDE3AQ14432 1141 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms