RNA–Protein interactions for RNA: ENST00000399158.2

MED28P1-201, Transcript of mediator complex subunit 28 pseudogene 1, humanhuman

BASIC

Gene MED28P1, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P1-201ENST00000399158 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
MED28P1-201ENST00000399158 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
MED28P1-201ENST00000399158 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
MED28P1-201ENST00000399158 RALBP1Q15311 655 aa11.93□□□□□ -0.5
MED28P1-201ENST00000399158 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
MED28P1-201ENST00000399158 PLEKHH1Q9ULM0 1364 aa11.92□□□□□ -0.5
MED28P1-201ENST00000399158 DIP2AQ14689 1571 aa11.92□□□□□ -0.5
MED28P1-201ENST00000399158 EVC2Q86UK5 1308 aa11.92□□□□□ -0.5
MED28P1-201ENST00000399158 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
MED28P1-201ENST00000399158 MSH5O43196 834 aa11.91□□□□□ -0.5
MED28P1-201ENST00000399158 CENPBP07199 599 aaPredicted RBP11.91□□□□□ -0.5
MED28P1-201ENST00000399158 EID1Q9Y6B2 187 aa11.91□□□□□ -0.5
MED28P1-201ENST00000399158 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
MED28P1-201ENST00000399158 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
MED28P1-201ENST00000399158 PTPRUQ92729 1446 aa11.9□□□□□ -0.5
MED28P1-201ENST00000399158 POGKQ9P215 609 aa11.9□□□□□ -0.5
MED28P1-201ENST00000399158 TBX22Q9Y458 520 aa11.9□□□□□ -0.5
MED28P1-201ENST00000399158 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
MED28P1-201ENST00000399158 SAFB2Q14151 953 aaKnown RBP eCLIP11.89□□□□□ -0.51
MED28P1-201ENST00000399158 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
MED28P1-201ENST00000399158 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
MED28P1-201ENST00000399158 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
MED28P1-201ENST00000399158 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
MED28P1-201ENST00000399158 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
MED28P1-201ENST00000399158 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
MED28P1-201ENST00000399158 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
MED28P1-201ENST00000399158 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
MED28P1-201ENST00000399158 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
MED28P1-201ENST00000399158 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.88□□□□□ -0.51
MED28P1-201ENST00000399158 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
MED28P1-201ENST00000399158 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
MED28P1-201ENST00000399158 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
MED28P1-201ENST00000399158 ROBO2Q9HCK4 1378 aa11.87□□□□□ -0.51
MED28P1-201ENST00000399158 ADGRB2O60241 1585 aa11.87□□□□□ -0.51
MED28P1-201ENST00000399158 BCANQ96GW7 911 aa11.86□□□□□ -0.51
MED28P1-201ENST00000399158 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
MED28P1-201ENST00000399158 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
MED28P1-201ENST00000399158 NINLQ9Y2I6 1382 aa11.86□□□□□ -0.51
MED28P1-201ENST00000399158 CD163L1Q9NR16 1453 aa11.86□□□□□ -0.51
MED28P1-201ENST00000399158 ATAD2Q6PL18 1390 aa11.85□□□□□ -0.51
MED28P1-201ENST00000399158 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
MED28P1-201ENST00000399158 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
MED28P1-201ENST00000399158 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
MED28P1-201ENST00000399158 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 NSD3Q9BZ95 1437 aa11.84□□□□□ -0.51
MED28P1-201ENST00000399158 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
MED28P1-201ENST00000399158 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
MED28P1-201ENST00000399158 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
MED28P1-201ENST00000399158 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
MED28P1-201ENST00000399158 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
MED28P1-201ENST00000399158 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
MED28P1-201ENST00000399158 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
MED28P1-201ENST00000399158 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
MED28P1-201ENST00000399158 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
MED28P1-201ENST00000399158 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
MED28P1-201ENST00000399158 ATP7BP35670 1465 aa11.8□□□□□ -0.52
MED28P1-201ENST00000399158 AKAP12Q02952 1782 aa11.79□□□□□ -0.52
MED28P1-201ENST00000399158 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
MED28P1-201ENST00000399158 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
MED28P1-201ENST00000399158 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
MED28P1-201ENST00000399158 CPSF1Q10570 1443 aaKnown RBP11.78□□□□□ -0.52
MED28P1-201ENST00000399158 MON2Q7Z3U7 1717 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 NUDT16Q96DE0 195 aaKnown RBP11.78□□□□□ -0.52
MED28P1-201ENST00000399158 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 CDC42BPGQ6DT37 1551 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 PRR36Q9H6K5 1346 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 NSD2O96028 1365 aa11.78□□□□□ -0.52
MED28P1-201ENST00000399158 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
MED28P1-201ENST00000399158 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
MED28P1-201ENST00000399158 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
MED28P1-201ENST00000399158 INSRP06213 1382 aa11.77□□□□□ -0.53
MED28P1-201ENST00000399158 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
MED28P1-201ENST00000399158 KCNA6P17658 529 aa11.76□□□□□ -0.53
MED28P1-201ENST00000399158 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
MED28P1-201ENST00000399158 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
MED28P1-201ENST00000399158 NALCNQ8IZF0 1738 aa11.75□□□□□ -0.53
MED28P1-201ENST00000399158 FMN2Q9NZ56 1722 aa11.75□□□□□ -0.53
MED28P1-201ENST00000399158 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
MED28P1-201ENST00000399158 RGPD8O14715 1765 aaPredicted RBP11.74□□□□□ -0.53
MED28P1-201ENST00000399158 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
MED28P1-201ENST00000399158 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 FYB1O15117 783 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 BLMP54132 1417 aaPredicted RBP11.73□□□□□ -0.53
MED28P1-201ENST00000399158 SHPRHQ149N8 1683 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 ZBED9Q6R2W3 1325 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
MED28P1-201ENST00000399158 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
MED28P1-201ENST00000399158 EDC4Q6P2E9 1401 aaKnown RBP11.72□□□□□ -0.53
MED28P1-201ENST00000399158 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
MED28P1-201ENST00000399158 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
MED28P1-201ENST00000399158 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
MED28P1-201ENST00000399158 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
MED28P1-201ENST00000399158 STRCQ7RTU9 1775 aa11.7□□□□□ -0.54
MED28P1-201ENST00000399158 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms