RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
BRCC3-206ENST00000399042 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
BRCC3-206ENST00000399042 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
BRCC3-206ENST00000399042 LAMC1P11047 1609 aa12.48□□□□□ -0.41
BRCC3-206ENST00000399042 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
BRCC3-206ENST00000399042 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
BRCC3-206ENST00000399042 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
BRCC3-206ENST00000399042 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
BRCC3-206ENST00000399042 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
BRCC3-206ENST00000399042 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
BRCC3-206ENST00000399042 SIRT1Q96EB6 747 aa12.46□□□□□ -0.41
BRCC3-206ENST00000399042 NRXN3Q9Y4C0 1643 aa12.46□□□□□ -0.41
BRCC3-206ENST00000399042 STRCQ7RTU9 1775 aa12.46□□□□□ -0.42
BRCC3-206ENST00000399042 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
BRCC3-206ENST00000399042 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
BRCC3-206ENST00000399042 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
BRCC3-206ENST00000399042 TMF1P82094 1093 aa12.45□□□□□ -0.42
BRCC3-206ENST00000399042 ADGRB1O14514 1584 aa12.44□□□□□ -0.42
BRCC3-206ENST00000399042 SRPK2P78362 688 aaKnown RBP12.44□□□□□ -0.42
BRCC3-206ENST00000399042 ATF3P18847 181 aa12.43□□□□□ -0.42
BRCC3-206ENST00000399042 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
BRCC3-206ENST00000399042 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
BRCC3-206ENST00000399042 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
BRCC3-206ENST00000399042 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
BRCC3-206ENST00000399042 FAM135BQ49AJ0 1406 aa12.42□□□□□ -0.42
BRCC3-206ENST00000399042 TMEM94Q12767 1356 aa12.42□□□□□ -0.42
BRCC3-206ENST00000399042 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
BRCC3-206ENST00000399042 TECPR2O15040 1411 aa12.4□□□□□ -0.42
BRCC3-206ENST00000399042 NUTM2FA1L443 756 aa12.4□□□□□ -0.42
BRCC3-206ENST00000399042 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
BRCC3-206ENST00000399042 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
BRCC3-206ENST00000399042 MSH6P52701 1360 aa12.4□□□□□ -0.42
BRCC3-206ENST00000399042 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.43
BRCC3-206ENST00000399042 DLC1Q96QB1 1528 aa12.39□□□□□ -0.43
BRCC3-206ENST00000399042 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
BRCC3-206ENST00000399042 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
BRCC3-206ENST00000399042 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-206ENST00000399042 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-206ENST00000399042 CPS1P31327 1500 aa12.37□□□□□ -0.43
BRCC3-206ENST00000399042 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
BRCC3-206ENST00000399042 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
BRCC3-206ENST00000399042 TESK2Q96S53 571 aa12.37□□□□□ -0.43
BRCC3-206ENST00000399042 CHD2O14647 1828 aaKnown RBP12.36□□□□□ -0.43
BRCC3-206ENST00000399042 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
BRCC3-206ENST00000399042 NCOA3Q9Y6Q9 1424 aa12.35□□□□□ -0.43
BRCC3-206ENST00000399042 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
BRCC3-206ENST00000399042 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
BRCC3-206ENST00000399042 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
BRCC3-206ENST00000399042 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
BRCC3-206ENST00000399042 ADGRL3Q9HAR2 1447 aa12.34□□□□□ -0.43
BRCC3-206ENST00000399042 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
BRCC3-206ENST00000399042 TOM1O60784 492 aa12.33□□□□□ -0.44
BRCC3-206ENST00000399042 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
BRCC3-206ENST00000399042 DISP3Q9P2K9 1392 aa12.32□□□□□ -0.44
BRCC3-206ENST00000399042 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
BRCC3-206ENST00000399042 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
BRCC3-206ENST00000399042 UBAP1LF5GYI3 381 aa12.32□□□□□ -0.44
BRCC3-206ENST00000399042 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
BRCC3-206ENST00000399042 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
BRCC3-206ENST00000399042 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
BRCC3-206ENST00000399042 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 C11orf95C9JLR9 678 aaPredicted RBP12.31□□□□□ -0.44
BRCC3-206ENST00000399042 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 CABP1Q9NZU7 370 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 SLAIN2Q9P270 581 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
BRCC3-206ENST00000399042 HDGFL2Q7Z4V5 671 aaPredicted RBP12.3□□□□□ -0.44
BRCC3-206ENST00000399042 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
BRCC3-206ENST00000399042 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
BRCC3-206ENST00000399042 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
BRCC3-206ENST00000399042 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
BRCC3-206ENST00000399042 WASHC2AQ641Q2 1341 aa12.29□□□□□ -0.44
BRCC3-206ENST00000399042 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
BRCC3-206ENST00000399042 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
BRCC3-206ENST00000399042 PSME1Q06323 249 aa12.28□□□□□ -0.44
BRCC3-206ENST00000399042 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
BRCC3-206ENST00000399042 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
BRCC3-206ENST00000399042 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
BRCC3-206ENST00000399042 ORAI2Q96SN7 254 aa12.27□□□□□ -0.45
BRCC3-206ENST00000399042 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.27□□□□□ -0.45
BRCC3-206ENST00000399042 DCCP43146 1447 aa12.27□□□□□ -0.45
BRCC3-206ENST00000399042 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
BRCC3-206ENST00000399042 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-206ENST00000399042 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-206ENST00000399042 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
BRCC3-206ENST00000399042 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
BRCC3-206ENST00000399042 TULP4Q9NRJ4 1543 aa12.26□□□□□ -0.45
BRCC3-206ENST00000399042 FOXO3O43524 673 aa12.25□□□□□ -0.45
BRCC3-206ENST00000399042 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
BRCC3-206ENST00000399042 PANK3Q9H999 370 aa12.25□□□□□ -0.45
BRCC3-206ENST00000399042 ANKARQ7Z5J8 1434 aa12.25□□□□□ -0.45
BRCC3-206ENST00000399042 ACEP12821 1306 aa12.24□□□□□ -0.45
BRCC3-206ENST00000399042 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
BRCC3-206ENST00000399042 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
BRCC3-206ENST00000399042 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
BRCC3-206ENST00000399042 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
BRCC3-206ENST00000399042 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
BRCC3-206ENST00000399042 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
BRCC3-206ENST00000399042 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms