RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 KIAA1210Q9ULL0 1709 aa25.2■■□□□ 1.62
COL13A1-205ENST00000398978 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.62
COL13A1-205ENST00000398978 POLR3AO14802 1390 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-205ENST00000398978 RUNDC1Q96C34 613 aa25.19■■□□□ 1.62
COL13A1-205ENST00000398978 ARAP3Q8WWN8 1544 aa25.19■■□□□ 1.62
COL13A1-205ENST00000398978 RARSP54136 660 aaKnown RBP25.18■■□□□ 1.62
COL13A1-205ENST00000398978 C14orf93Q9H972 538 aaKnown RBP25.18■■□□□ 1.62
COL13A1-205ENST00000398978 STK26Q9P289 416 aa25.18■■□□□ 1.62
COL13A1-205ENST00000398978 FRAT2O75474 233 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-205ENST00000398978 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
COL13A1-205ENST00000398978 U2AF1L5P0DN76 240 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-205ENST00000398978 U2AF1Q01081 240 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL13A1-205ENST00000398978 PCDHB15Q9Y5E8 787 aa25.16■■□□□ 1.62
COL13A1-205ENST00000398978 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
COL13A1-205ENST00000398978 PDE3AQ14432 1141 aa25.16■■□□□ 1.62
COL13A1-205ENST00000398978 NPATQ14207 1427 aa25.16■■□□□ 1.62
COL13A1-205ENST00000398978 SLC24A1O60721 1099 aa25.15■■□□□ 1.62
COL13A1-205ENST00000398978 RAPGEF3O95398 923 aa25.13■■□□□ 1.61
COL13A1-205ENST00000398978 TSR2Q969E8 191 aaKnown RBP25.13■■□□□ 1.61
COL13A1-205ENST00000398978 USP19O94966 1318 aa25.12■■□□□ 1.61
COL13A1-205ENST00000398978 IFT172Q9UG01 1749 aa25.12■■□□□ 1.61
COL13A1-205ENST00000398978 BRPF3Q9ULD4 1205 aa25.11■■□□□ 1.61
COL13A1-205ENST00000398978 U2SURPO15042 1029 aaKnown RBP25.1■■□□□ 1.61
COL13A1-205ENST00000398978 GSE1Q14687 1217 aa25.1■■□□□ 1.61
COL13A1-205ENST00000398978 NRXN1Q9ULB1 1477 aa25.1■■□□□ 1.61
COL13A1-205ENST00000398978 SHPRHQ149N8 1683 aa25.09■■□□□ 1.61
COL13A1-205ENST00000398978 GGNBP2Q9H3C7 697 aa25.09■■□□□ 1.61
COL13A1-205ENST00000398978 SBNO2Q9Y2G9 1366 aa25.08■■□□□ 1.61
COL13A1-205ENST00000398978 CFAP53Q96M91 514 aa25.08■■□□□ 1.61
COL13A1-205ENST00000398978 SLKQ9H2G2 1235 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-205ENST00000398978 QRICH2Q9H0J4 1663 aa25.08■■□□□ 1.61
COL13A1-205ENST00000398978 ADGRB3O60242 1522 aa25.08■■□□□ 1.61
COL13A1-205ENST00000398978 ZNF518AQ6AHZ1 1483 aa25.07■■□□□ 1.6
COL13A1-205ENST00000398978 NPM1P06748 294 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL13A1-205ENST00000398978 PDZRN3Q9UPQ7 1066 aa25.06■■□□□ 1.6
COL13A1-205ENST00000398978 SRPK2P78362 688 aaKnown RBP25.05■■□□□ 1.6
COL13A1-205ENST00000398978 NGEFQ8N5V2 710 aa25.04■■□□□ 1.6
COL13A1-205ENST00000398978 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
COL13A1-205ENST00000398978 EVC2Q86UK5 1308 aa25.03■■□□□ 1.6
COL13A1-205ENST00000398978 MYO3AQ8NEV4 1616 aa25.03■■□□□ 1.6
COL13A1-205ENST00000398978 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
COL13A1-205ENST00000398978 WDR63Q8IWG1 891 aa25.01■■□□□ 1.6
COL13A1-205ENST00000398978 SPRYD3Q8NCJ5 442 aa25.01■■□□□ 1.6
COL13A1-205ENST00000398978 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
COL13A1-205ENST00000398978 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-205ENST00000398978 CD109Q6YHK3 1445 aa25.01■■□□□ 1.59
COL13A1-205ENST00000398978 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
COL13A1-205ENST00000398978 FBLN1P23142 703 aa25■■□□□ 1.59
COL13A1-205ENST00000398978 MAPK8IP3Q9UPT6 1336 aa25■■□□□ 1.59
COL13A1-205ENST00000398978 PPLO60437 1756 aa24.99■■□□□ 1.59
COL13A1-205ENST00000398978 IDI1Q13907 227 aa24.99■■□□□ 1.59
COL13A1-205ENST00000398978 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
COL13A1-205ENST00000398978 FTSJ3Q8IY81 847 aaKnown RBP24.99■■□□□ 1.59
COL13A1-205ENST00000398978 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
COL13A1-205ENST00000398978 PMFBP1Q8TBY8 1022 aa24.98■■□□□ 1.59
COL13A1-205ENST00000398978 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
COL13A1-205ENST00000398978 MYH16Q9H6N6 1097 aa24.97■■□□□ 1.59
COL13A1-205ENST00000398978 SMC4Q9NTJ3 1288 aa24.97■■□□□ 1.59
COL13A1-205ENST00000398978 TULP4Q9NRJ4 1543 aa24.96■■□□□ 1.59
COL13A1-205ENST00000398978 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-205ENST00000398978 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
COL13A1-205ENST00000398978 ZC3H13Q5T200 1668 aaKnown RBP24.95■■□□□ 1.59
COL13A1-205ENST00000398978 POGZQ7Z3K3 1410 aa24.95■■□□□ 1.58
COL13A1-205ENST00000398978 A0A1W2PP64 1363 aa24.95■■□□□ 1.58
COL13A1-205ENST00000398978 ANKRD36BQ8N2N9 1353 aa24.95■■□□□ 1.58
COL13A1-205ENST00000398978 NINLQ9Y2I6 1382 aa24.95■■□□□ 1.58
COL13A1-205ENST00000398978 MVPQ14764 893 aaKnown RBP24.94■■□□□ 1.58
COL13A1-205ENST00000398978 GLI2P10070 1586 aa24.94■■□□□ 1.58
COL13A1-205ENST00000398978 ZKSCAN2Q63HK3 967 aa24.93■■□□□ 1.58
COL13A1-205ENST00000398978 DZIP1LQ8IYY4 767 aaKnown RBP24.93■■□□□ 1.58
COL13A1-205ENST00000398978 ITPRIPQ8IWB1 547 aa24.92■■□□□ 1.58
COL13A1-205ENST00000398978 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-205ENST00000398978 SSH1Q8WYL5 1049 aa24.92■■□□□ 1.58
COL13A1-205ENST00000398978 RPGRIP1LQ68CZ1 1315 aa24.92■■□□□ 1.58
COL13A1-205ENST00000398978 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
COL13A1-205ENST00000398978 PRAM1Q96QH2 718 aa24.91■■□□□ 1.58
COL13A1-205ENST00000398978 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
COL13A1-205ENST00000398978 ABCC3O15438 1527 aa24.91■■□□□ 1.58
COL13A1-205ENST00000398978 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
COL13A1-205ENST00000398978 CCDC27Q2M243 656 aa24.91■■□□□ 1.58
COL13A1-205ENST00000398978 TRIM35Q9UPQ4 493 aa24.91■■□□□ 1.58
COL13A1-205ENST00000398978 TRIM27P14373 513 aa24.9■■□□□ 1.58
COL13A1-205ENST00000398978 POGKQ9P215 609 aa24.89■■□□□ 1.58
COL13A1-205ENST00000398978 FYB1O15117 783 aa24.88■■□□□ 1.57
COL13A1-205ENST00000398978 ARXQ96QS3 562 aa24.88■■□□□ 1.57
COL13A1-205ENST00000398978 RIPK4P57078 832 aa24.88■■□□□ 1.57
COL13A1-205ENST00000398978 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
COL13A1-205ENST00000398978 NOB1Q9ULX3 412 aaKnown RBP24.88■■□□□ 1.57
COL13A1-205ENST00000398978 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
COL13A1-205ENST00000398978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.87■■□□□ 1.57
COL13A1-205ENST00000398978 BECN1Q14457 450 aa24.87■■□□□ 1.57
COL13A1-205ENST00000398978 FBXO31Q5XUX0 539 aaPredicted RBP24.87■■□□□ 1.57
COL13A1-205ENST00000398978 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
COL13A1-205ENST00000398978 MFAP1P55081 439 aaKnown RBP24.86■■□□□ 1.57
COL13A1-205ENST00000398978 UPF2Q9HAU5 1272 aaKnown RBP24.86■■□□□ 1.57
COL13A1-205ENST00000398978 VIRMAQ69YN4 1812 aaKnown RBP24.86■■□□□ 1.57
COL13A1-205ENST00000398978 TBC1D2Q9BYX2 928 aa24.85■■□□□ 1.57
COL13A1-205ENST00000398978 ARHGEF28Q8N1W1 1705 aaKnown RBP24.85■■□□□ 1.57
COL13A1-205ENST00000398978 MLH3Q9UHC1 1453 aa24.84■■□□□ 1.57
COL13A1-205ENST00000398978 HECW2Q9P2P5 1572 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms