RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 USP47Q96K76 1375 aa11.42□□□□□ -0.58
CDH23-203ENST00000398788 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
CDH23-203ENST00000398788 PDCL2Q8N4E4 241 aa11.42□□□□□ -0.58
CDH23-203ENST00000398788 C22orf23Q9BZE7 217 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 GORABQ5T7V8 394 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 GTPBP4Q9BZE4 634 aaKnown RBP11.41□□□□□ -0.58
CDH23-203ENST00000398788 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
CDH23-203ENST00000398788 KIF20AO95235 890 aa11.4□□□□□ -0.58
CDH23-203ENST00000398788 MCTP1Q6DN14 999 aa11.4□□□□□ -0.58
CDH23-203ENST00000398788 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
CDH23-203ENST00000398788 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
CDH23-203ENST00000398788 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
CDH23-203ENST00000398788 DMTNQ08495 405 aa11.4□□□□□ -0.58
CDH23-203ENST00000398788 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 ANKRD45Q5TZF3 282 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDH23-203ENST00000398788 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 GNL2Q13823 731 aaKnown RBP11.39□□□□□ -0.59
CDH23-203ENST00000398788 HMGN5P82970 282 aaKnown RBP11.39□□□□□ -0.59
CDH23-203ENST00000398788 KIF3AQ9Y496 699 aa11.39□□□□□ -0.59
CDH23-203ENST00000398788 TSC1Q92574 1164 aa11.38□□□□□ -0.59
CDH23-203ENST00000398788 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
CDH23-203ENST00000398788 EVC2Q86UK5 1308 aa11.38□□□□□ -0.59
CDH23-203ENST00000398788 ZBTB22O15209 634 aa11.37□□□□□ -0.59
CDH23-203ENST00000398788 EIF2S2P20042 333 aaKnown RBP11.37□□□□□ -0.59
CDH23-203ENST00000398788 PATL2C9JE40 543 aaKnown RBP11.37□□□□□ -0.59
CDH23-203ENST00000398788 RILPL2Q969X0 211 aa11.37□□□□□ -0.59
CDH23-203ENST00000398788 RIPK4P57078 832 aa11.36□□□□□ -0.59
CDH23-203ENST00000398788 HMMRO75330 724 aa11.36□□□□□ -0.59
CDH23-203ENST00000398788 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
CDH23-203ENST00000398788 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
CDH23-203ENST00000398788 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
CDH23-203ENST00000398788 SEC24BO95487 1268 aa11.36□□□□□ -0.59
CDH23-203ENST00000398788 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 HMOX1P09601 288 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
CDH23-203ENST00000398788 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 COG3Q96JB2 828 aa11.35□□□□□ -0.59
CDH23-203ENST00000398788 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
CDH23-203ENST00000398788 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 TROQ12816 1431 aaPredicted RBP11.34□□□□□ -0.59
CDH23-203ENST00000398788 CGNL1Q0VF96 1302 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 SAMD9Q5K651 1589 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 NRDCO43847 1150 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 NUTM2GQ5VZR2 741 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 DNAJC2Q99543 621 aaKnown RBP11.34□□□□□ -0.59
CDH23-203ENST00000398788 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
CDH23-203ENST00000398788 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
CDH23-203ENST00000398788 DIAPH3Q9NSV4 1193 aa11.33□□□□□ -0.6
CDH23-203ENST00000398788 CLSTN1O94985 981 aa11.33□□□□□ -0.6
CDH23-203ENST00000398788 UTP14CQ5TAP6 766 aaKnown RBP11.33□□□□□ -0.6
CDH23-203ENST00000398788 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
CDH23-203ENST00000398788 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
CDH23-203ENST00000398788 KIAA0556O60303 1618 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
CDH23-203ENST00000398788 NBPF1Q3BBV0 1214 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 PANK1Q8TE04 598 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
CDH23-203ENST00000398788 TEFQ10587 303 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 CFAP70Q5T0N1 1121 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 MAPKBP1O60336 1514 aa11.32□□□□□ -0.6
CDH23-203ENST00000398788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
CDH23-203ENST00000398788 PSME1Q06323 249 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
CDH23-203ENST00000398788 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
CDH23-203ENST00000398788 ZBTB9Q96C00 473 aa11.3□□□□□ -0.6
CDH23-203ENST00000398788 DIAPH1O60610 1272 aaKnown RBP11.3□□□□□ -0.6
CDH23-203ENST00000398788 LNPKQ9C0E8 428 aa11.3□□□□□ -0.6
CDH23-203ENST00000398788 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
CDH23-203ENST00000398788 ATF3P18847 181 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 THEMISQ8N1K5 641 aaPredicted RBP11.29□□□□□ -0.6
CDH23-203ENST00000398788 GPATCH11Q8N954 259 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 TERF1P54274 439 aa11.29□□□□□ -0.6
CDH23-203ENST00000398788 EVA1CP58658 441 aa11.28□□□□□ -0.6
CDH23-203ENST00000398788 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
CDH23-203ENST00000398788 BCAR3O75815 825 aa11.28□□□□□ -0.6
CDH23-203ENST00000398788 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH23-203ENST00000398788 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
CDH23-203ENST00000398788 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms