RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SYAP1Q96A49 352 aaPredicted RBP17.61■□□□□ 0.41
PCDHA11-201ENST00000398640 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
PCDHA11-201ENST00000398640 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
PCDHA11-201ENST00000398640 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
PCDHA11-201ENST00000398640 MYBBP1AQ9BQG0 1328 aaKnown RBP17.6■□□□□ 0.41
PCDHA11-201ENST00000398640 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
PCDHA11-201ENST00000398640 ANKRD30BQ9BXX2 1392 aa17.6■□□□□ 0.41
PCDHA11-201ENST00000398640 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
PCDHA11-201ENST00000398640 PLIN1O60240 522 aa17.59■□□□□ 0.41
PCDHA11-201ENST00000398640 TNRQ92752 1358 aa17.59■□□□□ 0.41
PCDHA11-201ENST00000398640 PTMSP20962 102 aa17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 KRI1Q8N9T8 703 aaKnown RBP17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 PDE3BQ13370 1112 aa17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 CCDC34Q96HJ3 373 aa17.58■□□□□ 0.4
PCDHA11-201ENST00000398640 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
PCDHA11-201ENST00000398640 TATP17735 454 aaPredicted RBP17.57■□□□□ 0.4
PCDHA11-201ENST00000398640 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
PCDHA11-201ENST00000398640 WASHC2AQ641Q2 1341 aa17.57■□□□□ 0.4
PCDHA11-201ENST00000398640 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
PCDHA11-201ENST00000398640 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
PCDHA11-201ENST00000398640 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
PCDHA11-201ENST00000398640 PES1O00541 588 aaKnown RBP17.56■□□□□ 0.4
PCDHA11-201ENST00000398640 TOM1O60784 492 aa17.56■□□□□ 0.4
PCDHA11-201ENST00000398640 SF3A1Q15459 793 aaKnown RBP17.56■□□□□ 0.4
PCDHA11-201ENST00000398640 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
PCDHA11-201ENST00000398640 DHX16O60231 1041 aaKnown RBP17.55■□□□□ 0.4
PCDHA11-201ENST00000398640 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
PCDHA11-201ENST00000398640 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
PCDHA11-201ENST00000398640 PLCH2O75038 1416 aa17.55■□□□□ 0.4
PCDHA11-201ENST00000398640 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
PCDHA11-201ENST00000398640 ATP10BO94823 1461 aa17.54■□□□□ 0.4
PCDHA11-201ENST00000398640 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
PCDHA11-201ENST00000398640 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
PCDHA11-201ENST00000398640 FAM135AQ9P2D6 1515 aa17.54■□□□□ 0.4
PCDHA11-201ENST00000398640 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 AKAP17AQ02040 695 aaKnown RBP17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 APPP05067 770 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
PCDHA11-201ENST00000398640 H3BQV1 296 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 CABP1Q9NZU7 370 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
PCDHA11-201ENST00000398640 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.39
PCDHA11-201ENST00000398640 KIAA0556O60303 1618 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 HMOX1P09601 288 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 ST18O60284 1047 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
PCDHA11-201ENST00000398640 GOLGA6L3A6NEY3 463 aa17.5■□□□□ 0.39
PCDHA11-201ENST00000398640 CEP89Q96ST8 783 aa17.5■□□□□ 0.39
PCDHA11-201ENST00000398640 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
PCDHA11-201ENST00000398640 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
PCDHA11-201ENST00000398640 MSH6P52701 1360 aa17.49■□□□□ 0.39
PCDHA11-201ENST00000398640 FYB1O15117 783 aa17.49■□□□□ 0.39
PCDHA11-201ENST00000398640 RIPK4P57078 832 aa17.49■□□□□ 0.39
PCDHA11-201ENST00000398640 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 TPD52L1Q16890 204 aaPredicted RBP17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 UGGT2Q9NYU1 1516 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 AIMP1Q12904 312 aaKnown RBP17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 SYNE3Q6ZMZ3 975 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 ABCC5O15440 1437 aa17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 HMGB2P26583 209 aaKnown RBP17.48■□□□□ 0.39
PCDHA11-201ENST00000398640 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
PCDHA11-201ENST00000398640 IDI1Q13907 227 aa17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 NUP160Q12769 1436 aa17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
PCDHA11-201ENST00000398640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 A2MP01023 1474 aa17.45■□□□□ 0.38
PCDHA11-201ENST00000398640 TPM3P06753 285 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 KCNH5Q8NCM2 988 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 HSPA2P54652 639 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 CABP4P57796 275 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
PCDHA11-201ENST00000398640 CRBNQ96SW2 442 aa17.43■□□□□ 0.38
PCDHA11-201ENST00000398640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms