RNA–Protein interactions for RNA: ENST00000398017.2

CHEK2-205, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 713 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-205ENST00000398017 ITGAEP38570 1179 aa12.25□□□□□ -0.45
CHEK2-205ENST00000398017 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
CHEK2-205ENST00000398017 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
CHEK2-205ENST00000398017 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
CHEK2-205ENST00000398017 TNRQ92752 1358 aa12.24□□□□□ -0.45
CHEK2-205ENST00000398017 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
CHEK2-205ENST00000398017 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
CHEK2-205ENST00000398017 ANKLE2Q86XL3 938 aa12.23□□□□□ -0.45
CHEK2-205ENST00000398017 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
CHEK2-205ENST00000398017 KIF3CO14782 793 aa12.22□□□□□ -0.45
CHEK2-205ENST00000398017 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
CHEK2-205ENST00000398017 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
CHEK2-205ENST00000398017 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
CHEK2-205ENST00000398017 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
CHEK2-205ENST00000398017 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
CHEK2-205ENST00000398017 PTPRTO14522 1441 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
CHEK2-205ENST00000398017 FOXK1P85037 733 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 PZPP20742 1482 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
CHEK2-205ENST00000398017 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
CHEK2-205ENST00000398017 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
CHEK2-205ENST00000398017 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
CHEK2-205ENST00000398017 STRCQ7RTU9 1775 aa12.18□□□□□ -0.46
CHEK2-205ENST00000398017 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
CHEK2-205ENST00000398017 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
CHEK2-205ENST00000398017 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
CHEK2-205ENST00000398017 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
CHEK2-205ENST00000398017 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
CHEK2-205ENST00000398017 HSPA1LP34931 641 aa12.17□□□□□ -0.46
CHEK2-205ENST00000398017 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
CHEK2-205ENST00000398017 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
CHEK2-205ENST00000398017 NLRP1Q9C000 1473 aa12.16□□□□□ -0.46
CHEK2-205ENST00000398017 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
CHEK2-205ENST00000398017 RNF17Q9BXT8 1623 aaKnown RBP12.16□□□□□ -0.46
CHEK2-205ENST00000398017 PPP1R15BQ5SWA1 713 aa12.16□□□□□ -0.46
CHEK2-205ENST00000398017 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
CHEK2-205ENST00000398017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHEK2-205ENST00000398017 ANKRD50Q9ULJ7 1429 aa12.15□□□□□ -0.46
CHEK2-205ENST00000398017 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
CHEK2-205ENST00000398017 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
CHEK2-205ENST00000398017 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
CHEK2-205ENST00000398017 ABCC3O15438 1527 aa12.15□□□□□ -0.46
CHEK2-205ENST00000398017 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
CHEK2-205ENST00000398017 DSG2Q14126 1118 aa12.14□□□□□ -0.47
CHEK2-205ENST00000398017 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
CHEK2-205ENST00000398017 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
CHEK2-205ENST00000398017 UGGT1Q9NYU2 1555 aa12.13□□□□□ -0.47
CHEK2-205ENST00000398017 HDGFP51858 240 aaKnown RBP12.13□□□□□ -0.47
CHEK2-205ENST00000398017 MFSD10Q14728 455 aa12.13□□□□□ -0.47
CHEK2-205ENST00000398017 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
CHEK2-205ENST00000398017 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
CHEK2-205ENST00000398017 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
CHEK2-205ENST00000398017 CEP152O94986 1710 aa12.12□□□□□ -0.47
CHEK2-205ENST00000398017 BCANQ96GW7 911 aa12.12□□□□□ -0.47
CHEK2-205ENST00000398017 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
CHEK2-205ENST00000398017 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
CHEK2-205ENST00000398017 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
CHEK2-205ENST00000398017 SLC52A1Q9NWF4 448 aa12.11□□□□□ -0.47
CHEK2-205ENST00000398017 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
CHEK2-205ENST00000398017 ERVK-7P63135 1459 aa12.1□□□□□ -0.47
CHEK2-205ENST00000398017 IDI1Q13907 227 aa12.1□□□□□ -0.47
CHEK2-205ENST00000398017 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
CHEK2-205ENST00000398017 TBC1D12O60347 775 aa12.09□□□□□ -0.47
CHEK2-205ENST00000398017 SLC34A2O95436 690 aa12.09□□□□□ -0.47
CHEK2-205ENST00000398017 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
CHEK2-205ENST00000398017 NUP155O75694 1391 aa12.08□□□□□ -0.48
CHEK2-205ENST00000398017 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
CHEK2-205ENST00000398017 TRIM52Q96A61 297 aa12.08□□□□□ -0.48
CHEK2-205ENST00000398017 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
CHEK2-205ENST00000398017 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
CHEK2-205ENST00000398017 DEPDC5O75140 1603 aa12.06□□□□□ -0.48
CHEK2-205ENST00000398017 IQSEC2Q5JU85 1478 aa12.06□□□□□ -0.48
CHEK2-205ENST00000398017 TOM1O60784 492 aa12.05□□□□□ -0.48
CHEK2-205ENST00000398017 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
CHEK2-205ENST00000398017 LTKP29376 864 aa12.05□□□□□ -0.48
CHEK2-205ENST00000398017 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
CHEK2-205ENST00000398017 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
CHEK2-205ENST00000398017 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
CHEK2-205ENST00000398017 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
CHEK2-205ENST00000398017 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHEK2-205ENST00000398017 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
CHEK2-205ENST00000398017 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
CHEK2-205ENST00000398017 ST18O60284 1047 aa12.02□□□□□ -0.49
CHEK2-205ENST00000398017 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
CHEK2-205ENST00000398017 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHEK2-205ENST00000398017 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.49
CHEK2-205ENST00000398017 MED14O60244 1454 aa12.02□□□□□ -0.49
CHEK2-205ENST00000398017 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
CHEK2-205ENST00000398017 E2F4Q16254 413 aa12.01□□□□□ -0.49
CHEK2-205ENST00000398017 POTEAQ6S8J7 498 aa12.01□□□□□ -0.49
CHEK2-205ENST00000398017 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
CHEK2-205ENST00000398017 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
CHEK2-205ENST00000398017 ZNF326Q5BKZ1 582 aaKnown RBP12□□□□□ -0.49
CHEK2-205ENST00000398017 NOS1P29475 1434 aa12□□□□□ -0.49
CHEK2-205ENST00000398017 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
CHEK2-205ENST00000398017 PIK3C2BO00750 1634 aa12□□□□□ -0.49
CHEK2-205ENST00000398017 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms