RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 SWAP70Q9UH65 585 aa10.9□□□□□ -0.66
TRPM1-202ENST00000397795 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
TRPM1-202ENST00000397795 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 VGLL3A8MV65 326 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 POLR3GO15318 223 aaPredicted RBP10.89□□□□□ -0.67
TRPM1-202ENST00000397795 NOL8Q76FK4 1167 aaKnown RBP10.89□□□□□ -0.67
TRPM1-202ENST00000397795 CCDC175P0C221 793 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 TBC1D2Q9BYX2 928 aa10.89□□□□□ -0.67
TRPM1-202ENST00000397795 KIF21BO75037 1637 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 RAPGEF2Q9Y4G8 1499 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 MPHOSPH9Q99550 1183 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 SEPT7Q16181 437 aaKnown RBP10.88□□□□□ -0.67
TRPM1-202ENST00000397795 MCTP1Q6DN14 999 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 CEP63Q96MT8 703 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 GORABQ5T7V8 394 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 DNAAF4Q8WXU2 420 aa10.88□□□□□ -0.67
TRPM1-202ENST00000397795 GBP2P32456 591 aaPredicted RBP10.87□□□□□ -0.67
TRPM1-202ENST00000397795 PPM1EQ8WY54 764 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRPM1-202ENST00000397795 MARCH6O60337 910 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 SKAP1Q86WV1 359 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 ODF2Q5BJF6 829 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 DAAM2Q86T65 1068 aa10.87□□□□□ -0.67
TRPM1-202ENST00000397795 MNAT1P51948 309 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 IQCEQ6IPM2 695 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 C8orf34Q49A92 452 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 BICD2Q8TD16 824 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 MBD3O95983 291 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 GBP3Q9H0R5 595 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 UACAQ9BZF9 1416 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 SMARCE1Q969G3 411 aa10.86□□□□□ -0.67
TRPM1-202ENST00000397795 APBB1O00213 710 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
TRPM1-202ENST00000397795 FSD2A1L4K1 749 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 DHX37Q8IY37 1157 aaKnown RBP10.85□□□□□ -0.67
TRPM1-202ENST00000397795 PAF1Q8N7H5 531 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 RNF214Q8ND24 703 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
TRPM1-202ENST00000397795 LUZP1Q86V48 1076 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 CCDC91Q7Z6B0 441 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 TMCO3Q6UWJ1 677 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 MROH2BQ7Z745 1585 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 ANKRD62A6NC57 917 aa10.84□□□□□ -0.67
TRPM1-202ENST00000397795 OLFM4Q6UX06 510 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 TSPY26PQ9H489 355 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 NPHP1O15259 732 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 DZIP1Q86YF9 867 aaKnown RBP10.83□□□□□ -0.68
TRPM1-202ENST00000397795 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 FEZ1Q99689 392 aa10.83□□□□□ -0.68
TRPM1-202ENST00000397795 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 PDILTQ8N807 584 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 TRIM5Q9C035 493 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 NOL7Q9UMY1 257 aaKnown RBP10.82□□□□□ -0.68
TRPM1-202ENST00000397795 MAP2K1Q02750 393 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-202ENST00000397795 LIG1P18858 919 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 TCHPQ9BT92 498 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 IBSPP21815 317 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-202ENST00000397795 CUX2O14529 1486 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
TRPM1-202ENST00000397795 MRVI1Q9Y6F6 885 aa10.82□□□□□ -0.68
TRPM1-202ENST00000397795 TAX1BP1Q86VP1 789 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 CFAP45Q9UL16 551 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 TMF1P82094 1093 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 RNF168Q8IYW5 571 aaPredicted RBP10.81□□□□□ -0.68
TRPM1-202ENST00000397795 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
TRPM1-202ENST00000397795 STAMBPO95630 424 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 FAM184BQ9ULE4 1060 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 USP47Q96K76 1375 aa10.81□□□□□ -0.68
TRPM1-202ENST00000397795 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 TBC1D32Q96NH3 1257 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 KIF3CO14782 793 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
TRPM1-202ENST00000397795 TRIM29Q14134 588 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 FOXD1Q16676 465 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 PRDM4Q9UKN5 801 aa10.8□□□□□ -0.68
TRPM1-202ENST00000397795 KIF2AO00139 706 aaPredicted RBP10.8□□□□□ -0.68
TRPM1-202ENST00000397795 CPLX2Q6PUV4 134 aaKnown RBP10.8□□□□□ -0.68
TRPM1-202ENST00000397795 GOLGA6L9A6NEM1 432 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 PRPF40AO75400 957 aaKnown RBP10.79□□□□□ -0.68
TRPM1-202ENST00000397795 FAM193AP78312 1265 aa10.79□□□□□ -0.68
TRPM1-202ENST00000397795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms