RNA–Protein interactions for RNA: ENST00000397647.7

PAX8-204, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-204ENST00000397647 SYNMO15061 1565 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
PAX8-204ENST00000397647 MADDQ8WXG6 1647 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 TRIM27P14373 513 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 GAS2L3Q86XJ1 694 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
PAX8-204ENST00000397647 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 IQGAP3Q86VI3 1631 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
PAX8-204ENST00000397647 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 GRPEL1Q9HAV7 217 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
PAX8-204ENST00000397647 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
PAX8-204ENST00000397647 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
PAX8-204ENST00000397647 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
PAX8-204ENST00000397647 MYOM1P52179 1685 aa17.12■□□□□ 0.33
PAX8-204ENST00000397647 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
PAX8-204ENST00000397647 RNF17Q9BXT8 1623 aaKnown RBP17.11■□□□□ 0.33
PAX8-204ENST00000397647 VIRMAQ69YN4 1812 aaKnown RBP17.11■□□□□ 0.33
PAX8-204ENST00000397647 ATP10AO60312 1499 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
PAX8-204ENST00000397647 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
PAX8-204ENST00000397647 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
PAX8-204ENST00000397647 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
PAX8-204ENST00000397647 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
PAX8-204ENST00000397647 CLCN1P35523 988 aa17.09■□□□□ 0.33
PAX8-204ENST00000397647 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
PAX8-204ENST00000397647 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
PAX8-204ENST00000397647 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
PAX8-204ENST00000397647 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.33
PAX8-204ENST00000397647 MRE11P49959 708 aa17.08■□□□□ 0.32
PAX8-204ENST00000397647 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
PAX8-204ENST00000397647 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
PAX8-204ENST00000397647 ESPNB1AK53 854 aa17.07■□□□□ 0.32
PAX8-204ENST00000397647 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
PAX8-204ENST00000397647 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
PAX8-204ENST00000397647 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
PAX8-204ENST00000397647 FBLN1P23142 703 aa17.06■□□□□ 0.32
PAX8-204ENST00000397647 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
PAX8-204ENST00000397647 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
PAX8-204ENST00000397647 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
PAX8-204ENST00000397647 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
PAX8-204ENST00000397647 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
PAX8-204ENST00000397647 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
PAX8-204ENST00000397647 RTEL1-TNFRSF6BF6WH68 1400 aa17.05■□□□□ 0.32
PAX8-204ENST00000397647 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
PAX8-204ENST00000397647 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
PAX8-204ENST00000397647 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
PAX8-204ENST00000397647 ZMYND15Q9H091 742 aa17.02■□□□□ 0.32
PAX8-204ENST00000397647 CEP152O94986 1710 aa17.02■□□□□ 0.32
PAX8-204ENST00000397647 STK26Q9P289 416 aa17.02■□□□□ 0.32
PAX8-204ENST00000397647 DDX11L8A8MPP1 907 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 SSFA2P28290 1259 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 TRIM35Q9UPQ4 493 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 PTPRTO14522 1441 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 NCLP19338 710 aaKnown RBP17.01■□□□□ 0.31
PAX8-204ENST00000397647 RIPK4P57078 832 aa17.01■□□□□ 0.31
PAX8-204ENST00000397647 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
PAX8-204ENST00000397647 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
PAX8-204ENST00000397647 PKNOX2Q96KN3 472 aa17■□□□□ 0.31
PAX8-204ENST00000397647 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
PAX8-204ENST00000397647 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
PAX8-204ENST00000397647 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
PAX8-204ENST00000397647 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 NOS1P29475 1434 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 GGT6Q6P531 493 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 ARID3AQ99856 593 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
PAX8-204ENST00000397647 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 KIF2CQ99661 725 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 PLCH2O75038 1416 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 AAMPQ13685 434 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 TRPM2O94759 1503 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 KANK1Q14678 1352 aa16.97■□□□□ 0.31
PAX8-204ENST00000397647 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 DDIT3P35638 169 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 NUCB1Q02818 461 aa16.96■□□□□ 0.31
PAX8-204ENST00000397647 APBB1O00213 710 aa16.95■□□□□ 0.3
PAX8-204ENST00000397647 RBM10P98175 930 aaKnown RBP16.95■□□□□ 0.3
PAX8-204ENST00000397647 GBP4Q96PP9 640 aa16.95■□□□□ 0.3
PAX8-204ENST00000397647 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
PAX8-204ENST00000397647 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
PAX8-204ENST00000397647 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms