RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
PTPRD-206ENST00000397617 SIGLEC1Q9BZZ2 1709 aa7.8□□□□□ -1.16
PTPRD-206ENST00000397617 PTPRMP28827 1452 aa7.8□□□□□ -1.16
PTPRD-206ENST00000397617 KAT6BQ8WYB5 2073 aa7.8□□□□□ -1.16
PTPRD-206ENST00000397617 CFAP65Q6ZU64 1925 aaKnown RBP7.8□□□□□ -1.16
PTPRD-206ENST00000397617 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPRD-206ENST00000397617 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
PTPRD-206ENST00000397617 RGL3Q3MIN7 710 aa7.8□□□□□ -1.16
PTPRD-206ENST00000397617 ZNF692Q9BU19 519 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-206ENST00000397617 ANKARQ7Z5J8 1434 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 NCOA3Q9Y6Q9 1424 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 ADGRF5Q8IZF2 1346 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 RIMS2Q9UQ26 1411 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 DISP3Q9P2K9 1392 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 ANKRD26Q9UPS8 1709 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 THEMISQ8N1K5 641 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-206ENST00000397617 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 KDM2AQ9Y2K7 1162 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 PNPLA6Q8IY17 1366 aa7.79□□□□□ -1.16
PTPRD-206ENST00000397617 IL16Q14005 1332 aa7.78□□□□□ -1.16
PTPRD-206ENST00000397617 ZNF326Q5BKZ1 582 aaKnown RBP7.78□□□□□ -1.16
PTPRD-206ENST00000397617 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
PTPRD-206ENST00000397617 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
PTPRD-206ENST00000397617 QRICH2Q9H0J4 1663 aa7.78□□□□□ -1.16
PTPRD-206ENST00000397617 MS4A1P11836 297 aa7.78□□□□□ -1.16
PTPRD-206ENST00000397617 ALKQ9UM73 1620 aa7.78□□□□□ -1.16
PTPRD-206ENST00000397617 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.16
PTPRD-206ENST00000397617 EDC4Q6P2E9 1401 aaKnown RBP7.77□□□□□ -1.17
PTPRD-206ENST00000397617 CALD1Q05682 793 aaKnown RBP7.76□□□□□ -1.17
PTPRD-206ENST00000397617 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
PTPRD-206ENST00000397617 PANK3Q9H999 370 aa7.76□□□□□ -1.17
PTPRD-206ENST00000397617 CACNA1FO60840 1977 aa7.76□□□□□ -1.17
PTPRD-206ENST00000397617 PPP4R2Q9NY27 417 aa7.76□□□□□ -1.17
PTPRD-206ENST00000397617 CCDC61Q9Y6R9 512 aa7.76□□□□□ -1.17
PTPRD-206ENST00000397617 SOS1Q07889 1333 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-206ENST00000397617 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
PTPRD-206ENST00000397617 CPSF1Q10570 1443 aaKnown RBP7.75□□□□□ -1.17
PTPRD-206ENST00000397617 UBR1Q8IWV7 1749 aa7.75□□□□□ -1.17
PTPRD-206ENST00000397617 EID1Q9Y6B2 187 aa7.75□□□□□ -1.17
PTPRD-206ENST00000397617 ZNF142P52746 1687 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-206ENST00000397617 IL27Q8NEV9 243 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 TTC21AQ8NDW8 1320 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 EIF5BO60841 1220 aaKnown RBP7.74□□□□□ -1.17
PTPRD-206ENST00000397617 HDGFL2Q7Z4V5 671 aaPredicted RBP7.74□□□□□ -1.17
PTPRD-206ENST00000397617 WDR63Q8IWG1 891 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 PPIP5K1Q6PFW1 1433 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 PPP2R1AP30153 589 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 USP31Q70CQ4 1352 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 E9PSI1 815 aa7.74□□□□□ -1.17
PTPRD-206ENST00000397617 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
PTPRD-206ENST00000397617 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
PTPRD-206ENST00000397617 CDK12Q9NYV4 1490 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-206ENST00000397617 WDR43Q15061 677 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTPRD-206ENST00000397617 ITSN1Q15811 1721 aa7.73□□□□□ -1.17
PTPRD-206ENST00000397617 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
PTPRD-206ENST00000397617 ADAMTS13Q76LX8 1427 aa7.73□□□□□ -1.17
PTPRD-206ENST00000397617 LMTK3Q96Q04 1460 aa7.73□□□□□ -1.17
PTPRD-206ENST00000397617 NRXN3Q9Y4C0 1643 aa7.72□□□□□ -1.17
PTPRD-206ENST00000397617 PTPRUQ92729 1446 aa7.72□□□□□ -1.17
PTPRD-206ENST00000397617 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
PTPRD-206ENST00000397617 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
PTPRD-206ENST00000397617 MYO5BQ9ULV0 1848 aa7.72□□□□□ -1.17
PTPRD-206ENST00000397617 DCCP43146 1447 aa7.71□□□□□ -1.17
PTPRD-206ENST00000397617 MST1RQ04912 1400 aa7.71□□□□□ -1.17
PTPRD-206ENST00000397617 LMOD3Q0VAK6 560 aa7.71□□□□□ -1.17
PTPRD-206ENST00000397617 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
PTPRD-206ENST00000397617 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.18
PTPRD-206ENST00000397617 STAG3Q9UJ98 1225 aa7.71□□□□□ -1.18
PTPRD-206ENST00000397617 NSD3Q9BZ95 1437 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 XRN1Q8IZH2 1706 aaKnown RBP7.7□□□□□ -1.18
PTPRD-206ENST00000397617 ABCC6O95255 1503 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 FER1L4A9Z1Z3 1794 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 RTL1A6NKG5 1358 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 TSPOAP1O95153 1857 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
PTPRD-206ENST00000397617 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 MYH16Q9H6N6 1097 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 ADAMTSL3P82987 1691 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 TTC21BQ7Z4L5 1316 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 FCHSD2O94868 740 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 POGKQ9P215 609 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 NEFMP07197 916 aa7.69□□□□□ -1.18
PTPRD-206ENST00000397617 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-206ENST00000397617 RUNDC1Q96C34 613 aa7.68□□□□□ -1.18
PTPRD-206ENST00000397617 MORC1Q86VD1 984 aa7.68□□□□□ -1.18
PTPRD-206ENST00000397617 IBTKQ9P2D0 1353 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-206ENST00000397617 CEP170BQ9Y4F5 1589 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-206ENST00000397617 ADGRL3Q9HAR2 1447 aa7.67□□□□□ -1.18
PTPRD-206ENST00000397617 SSH2Q76I76 1423 aa7.67□□□□□ -1.18
PTPRD-206ENST00000397617 PHRF1Q9P1Y6 1649 aaKnown RBP7.66□□□□□ -1.18
PTPRD-206ENST00000397617 RCAN3Q9UKA8 241 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 HIRIP3Q9BW71 556 aaPredicted RBP7.66□□□□□ -1.18
PTPRD-206ENST00000397617 CD163L1Q9NR16 1453 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 A0A1W2PP64 1363 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 AKAP12Q02952 1782 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 C3P01024 1663 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 TOPAZ1Q8N9V7 1692 aa7.66□□□□□ -1.18
PTPRD-206ENST00000397617 CARD14Q9BXL6 1004 aa7.65□□□□□ -1.18
PTPRD-206ENST00000397617 KDRP35968 1356 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms