RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NPM1P06748 294 aaKnown RBP eCLIP6.43□□□□□ -1.38
SSR1-202ENST00000397511 MTHFSP49914 203 aa6.43□□□□□ -1.38
SSR1-202ENST00000397511 HAP1P54257 671 aaPredicted RBP6.43□□□□□ -1.38
SSR1-202ENST00000397511 RBM10P98175 930 aaKnown RBP6.43□□□□□ -1.38
SSR1-202ENST00000397511 NOS1P29475 1434 aa6.43□□□□□ -1.38
SSR1-202ENST00000397511 EIF3AQ14152 1382 aaKnown RBP6.43□□□□□ -1.38
SSR1-202ENST00000397511 ASXL1Q8IXJ9 1541 aa6.43□□□□□ -1.38
SSR1-202ENST00000397511 CENPJQ9HC77 1338 aaPredicted RBP6.43□□□□□ -1.38
SSR1-202ENST00000397511 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
SSR1-202ENST00000397511 FBLN1P23142 703 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 WWC1Q8IX03 1113 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 ZFYVE16Q7Z3T8 1539 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 U2AF1L5P0DN76 240 aaPredicted RBP6.42□□□□□ -1.38
SSR1-202ENST00000397511 CLCN1P35523 988 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 U2AF1Q01081 240 aaKnown RBP eCLIP6.42□□□□□ -1.38
SSR1-202ENST00000397511 CENPQQ7L2Z9 268 aaPredicted RBP6.42□□□□□ -1.38
SSR1-202ENST00000397511 TCP11L2Q8N4U5 519 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 ZNF521Q96K83 1311 aa6.42□□□□□ -1.38
SSR1-202ENST00000397511 KDM2BQ8NHM5 1336 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 NSD3Q9BZ95 1437 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 SRPK2P78362 688 aaKnown RBP6.41□□□□□ -1.38
SSR1-202ENST00000397511 AAMPQ13685 434 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 GGNBP2Q9H3C7 697 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 ATP7AQ04656 1500 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 SPHKAPQ2M3C7 1700 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 TRPM2O94759 1503 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 E9PSI1 815 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 TSR2Q969E8 191 aaKnown RBP6.41□□□□□ -1.38
SSR1-202ENST00000397511 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
SSR1-202ENST00000397511 SEC24BO95487 1268 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 FGD1P98174 961 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 C8orf34Q49A92 452 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 SPRYD3Q8NCJ5 442 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 ASXL2Q76L83 1435 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 FAM161AQ3B820 660 aa6.4□□□□□ -1.38
SSR1-202ENST00000397511 MINK1Q8N4C8 1332 aaPredicted RBP6.4□□□□□ -1.39
SSR1-202ENST00000397511 RLBP1P12271 317 aa6.4□□□□□ -1.39
SSR1-202ENST00000397511 CALD1Q05682 793 aaKnown RBP6.4□□□□□ -1.39
SSR1-202ENST00000397511 RNF17Q9BXT8 1623 aaKnown RBP6.4□□□□□ -1.39
SSR1-202ENST00000397511 IQGAP1P46940 1657 aa6.39□□□□□ -1.39
SSR1-202ENST00000397511 NKTRP30414 1462 aaKnown RBP6.39□□□□□ -1.39
SSR1-202ENST00000397511 OSCARQ8IYS5 282 aa6.39□□□□□ -1.39
SSR1-202ENST00000397511 PDCL3Q9H2J4 239 aa6.39□□□□□ -1.39
SSR1-202ENST00000397511 PTPRTO14522 1441 aa6.39□□□□□ -1.39
SSR1-202ENST00000397511 SLKQ9H2G2 1235 aaPredicted RBP6.39□□□□□ -1.39
SSR1-202ENST00000397511 CEP152O94986 1710 aa6.39□□□□□ -1.39
SSR1-202ENST00000397511 PDE4CQ08493 712 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 LAMC1P11047 1609 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 KDM5AP29375 1690 aaKnown RBP6.38□□□□□ -1.39
SSR1-202ENST00000397511 MYOM1P52179 1685 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 SYNMO15061 1565 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 RTEL1-TNFRSF6BF6WH68 1400 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 MLECQ14165 292 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.38□□□□□ -1.392e-7■□□□□ 10
SSR1-202ENST00000397511 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 ABCA6Q8N139 1617 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 TPM2P07951 284 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
SSR1-202ENST00000397511 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
SSR1-202ENST00000397511 POGKQ9P215 609 aa6.38□□□□□ -1.39
SSR1-202ENST00000397511 IDI1Q13907 227 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 RUNDC1Q96C34 613 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 STAG3Q9UJ98 1225 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 NPATQ14207 1427 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 RARSP54136 660 aaKnown RBP6.37□□□□□ -1.39
SSR1-202ENST00000397511 FBXO31Q5XUX0 539 aaPredicted RBP6.37□□□□□ -1.39
SSR1-202ENST00000397511 C14orf93Q9H972 538 aaKnown RBP6.37□□□□□ -1.39
SSR1-202ENST00000397511 CGNL1Q0VF96 1302 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 MROH2AA6NES4 1674 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 TET3O43151 1660 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 MAP3K4Q9Y6R4 1608 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 ELL2O00472 640 aaPredicted RBP6.37□□□□□ -1.39
SSR1-202ENST00000397511 FTSJ3Q8IY81 847 aaKnown RBP6.37□□□□□ -1.39
SSR1-202ENST00000397511 CFAP53Q96M91 514 aa6.37□□□□□ -1.39
SSR1-202ENST00000397511 GOLGA6L3A6NEY3 463 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 CD109Q6YHK3 1445 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 KIF1BO60333 1816 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 PRAM1Q96QH2 718 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 ABCA9Q8IUA7 1624 aa6.36□□□□□ -1.39
SSR1-202ENST00000397511 SMC4Q9NTJ3 1288 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 PRDM4Q9UKN5 801 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 PPRC1Q5VV67 1664 aaKnown RBP6.35□□□□□ -1.39
SSR1-202ENST00000397511 EVC2Q86UK5 1308 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 EXOSC9Q06265 439 aaKnown RBP6.35□□□□□ -1.39
SSR1-202ENST00000397511 CYB5RLQ6IPT4 315 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 ITPRIPQ8IWB1 547 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 CFAP74Q9C0B2 1584 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 NUTM2FA1L443 756 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 VGFO15240 615 aaPredicted RBP6.35□□□□□ -1.39
SSR1-202ENST00000397511 HMOX1P09601 288 aa6.35□□□□□ -1.39
SSR1-202ENST00000397511 THUMPD2Q9BTF0 503 aaKnown RBP6.35□□□□□ -1.39
SSR1-202ENST00000397511 MROH1Q8NDA8 1641 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 INO80Q9ULG1 1556 aaPredicted RBP6.34□□□□□ -1.39
SSR1-202ENST00000397511 INSRP06213 1382 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 WAPLQ7Z5K2 1190 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 PDZRN3Q9UPQ7 1066 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 KIDINS220Q9ULH0 1771 aa6.34□□□□□ -1.39
SSR1-202ENST00000397511 MAPK8IP3Q9UPT6 1336 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms