RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.77
TSPAN4-204ENST00000397404 PTPRUQ92729 1446 aa26.13■■□□□ 1.77
TSPAN4-204ENST00000397404 ROBO2Q9HCK4 1378 aa26.11■■□□□ 1.77
TSPAN4-204ENST00000397404 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-204ENST00000397404 MYOM1P52179 1685 aa26.09■■□□□ 1.77
TSPAN4-204ENST00000397404 NWD1Q149M9 1564 aa26.08■■□□□ 1.77
TSPAN4-204ENST00000397404 MIER1Q8N108 512 aa26.08■■□□□ 1.77
TSPAN4-204ENST00000397404 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
TSPAN4-204ENST00000397404 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-204ENST00000397404 NCKAP5LQ9HCH0 1330 aa26.07■■□□□ 1.76
TSPAN4-204ENST00000397404 CCER2I3L3R5 266 aa26.06■■□□□ 1.76
TSPAN4-204ENST00000397404 KCNA6P17658 529 aa26.06■■□□□ 1.76
TSPAN4-204ENST00000397404 WASLO00401 505 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 SRPK2P78362 688 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 SAFB2Q14151 953 aaKnown RBP eCLIP26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 NPC1L1Q9UHC9 1359 aa26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 PLEKHH1Q9ULM0 1364 aa26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 NKTRP30414 1462 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-204ENST00000397404 PANK3Q9H999 370 aa26.04■■□□□ 1.76
TSPAN4-204ENST00000397404 CDK19Q9BWU1 502 aa26.04■■□□□ 1.76
TSPAN4-204ENST00000397404 PER1O15534 1290 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-204ENST00000397404 KNSTRNQ9Y448 316 aa26.02■■□□□ 1.76
TSPAN4-204ENST00000397404 RALBP1Q15311 655 aa26.01■■□□□ 1.75
TSPAN4-204ENST00000397404 ANKRD36BQ8N2N9 1353 aa26.01■■□□□ 1.75
TSPAN4-204ENST00000397404 PRKRIP1Q9H875 184 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-204ENST00000397404 NCOA3Q9Y6Q9 1424 aa26■■□□□ 1.75
TSPAN4-204ENST00000397404 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
TSPAN4-204ENST00000397404 TERF2IPQ9NYB0 399 aa25.98■■□□□ 1.75
TSPAN4-204ENST00000397404 CABP2Q9NPB3 220 aa25.98■■□□□ 1.75
TSPAN4-204ENST00000397404 ATP7BP35670 1465 aa25.97■■□□□ 1.75
TSPAN4-204ENST00000397404 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-204ENST00000397404 TMC1Q8TDI8 760 aa25.96■■□□□ 1.75
TSPAN4-204ENST00000397404 USP32Q8NFA0 1604 aa25.95■■□□□ 1.74
TSPAN4-204ENST00000397404 STRCQ7RTU9 1775 aa25.94■■□□□ 1.74
TSPAN4-204ENST00000397404 CCDC61Q9Y6R9 512 aa25.94■■□□□ 1.74
TSPAN4-204ENST00000397404 ANKARQ7Z5J8 1434 aa25.94■■□□□ 1.74
TSPAN4-204ENST00000397404 CDC42BPGQ6DT37 1551 aa25.93■■□□□ 1.74
TSPAN4-204ENST00000397404 HSPA2P54652 639 aa25.93■■□□□ 1.74
TSPAN4-204ENST00000397404 HDGFL2Q7Z4V5 671 aaPredicted RBP25.92■■□□□ 1.74
TSPAN4-204ENST00000397404 NSD2O96028 1365 aa25.92■■□□□ 1.74
TSPAN4-204ENST00000397404 ADGRL3Q9HAR2 1447 aa25.92■■□□□ 1.74
TSPAN4-204ENST00000397404 SLC12A5Q9H2X9 1139 aa25.91■■□□□ 1.74
TSPAN4-204ENST00000397404 PARD3Q8TEW0 1356 aa25.91■■□□□ 1.74
TSPAN4-204ENST00000397404 NUDT16Q96DE0 195 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-204ENST00000397404 ITSN1Q15811 1721 aa25.9■■□□□ 1.74
TSPAN4-204ENST00000397404 ZNF692Q9BU19 519 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-204ENST00000397404 CGNL1Q0VF96 1302 aa25.88■■□□□ 1.73
TSPAN4-204ENST00000397404 AMER1Q5JTC6 1135 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-204ENST00000397404 PPIP5K1Q6PFW1 1433 aa25.87■■□□□ 1.73
TSPAN4-204ENST00000397404 TOPAZ1Q8N9V7 1692 aa25.86■■□□□ 1.73
TSPAN4-204ENST00000397404 MYBBP1AQ9BQG0 1328 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-204ENST00000397404 DCCP43146 1447 aa25.85■■□□□ 1.73
TSPAN4-204ENST00000397404 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
TSPAN4-204ENST00000397404 PLEKHG3A1L390 1219 aa25.85■■□□□ 1.73
TSPAN4-204ENST00000397404 CABP1Q9NZU7 370 aa25.85■■□□□ 1.73
TSPAN4-204ENST00000397404 A0A1W2PP64 1363 aa25.84■■□□□ 1.73
TSPAN4-204ENST00000397404 FMN2Q9NZ56 1722 aa25.84■■□□□ 1.73
TSPAN4-204ENST00000397404 CPSF1Q10570 1443 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-204ENST00000397404 NALCNQ8IZF0 1738 aa25.83■■□□□ 1.73
TSPAN4-204ENST00000397404 PROSER2Q86WR7 435 aaPredicted RBP25.83■■□□□ 1.73
TSPAN4-204ENST00000397404 CARD14Q9BXL6 1004 aa25.83■■□□□ 1.73
TSPAN4-204ENST00000397404 CD163L1Q9NR16 1453 aa25.82■■□□□ 1.72
TSPAN4-204ENST00000397404 BRD4O60885 1362 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-204ENST00000397404 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-204ENST00000397404 NLRP13Q86W25 1043 aa25.79■■□□□ 1.72
TSPAN4-204ENST00000397404 C19orf44Q9H6X5 657 aa25.79■■□□□ 1.72
TSPAN4-204ENST00000397404 PRR36Q9H6K5 1346 aa25.77■■□□□ 1.72
TSPAN4-204ENST00000397404 AKAP12Q02952 1782 aa25.77■■□□□ 1.72
TSPAN4-204ENST00000397404 C14orf37Q86TY3 774 aa25.76■■□□□ 1.71
TSPAN4-204ENST00000397404 MON2Q7Z3U7 1717 aa25.75■■□□□ 1.71
TSPAN4-204ENST00000397404 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
TSPAN4-204ENST00000397404 CC2D1BQ5T0F9 858 aaKnown RBP25.75■■□□□ 1.71
TSPAN4-204ENST00000397404 TMEM94Q12767 1356 aa25.73■■□□□ 1.71
TSPAN4-204ENST00000397404 STRCP1A6NGW2 1772 aa25.72■■□□□ 1.71
TSPAN4-204ENST00000397404 ANKRD26Q9UPS8 1709 aa25.7■■□□□ 1.71
TSPAN4-204ENST00000397404 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
TSPAN4-204ENST00000397404 MRS2Q9HD23 443 aa25.7■■□□□ 1.7
TSPAN4-204ENST00000397404 MSH6P52701 1360 aa25.7■■□□□ 1.7
TSPAN4-204ENST00000397404 ACEP12821 1306 aa25.69■■□□□ 1.7
TSPAN4-204ENST00000397404 ATF3P18847 181 aa25.68■■□□□ 1.7
TSPAN4-204ENST00000397404 MORC1Q86VD1 984 aa25.68■■□□□ 1.7
TSPAN4-204ENST00000397404 KIF20BQ96Q89 1820 aa25.68■■□□□ 1.7
TSPAN4-204ENST00000397404 USP6P35125 1406 aa25.68■■□□□ 1.7
TSPAN4-204ENST00000397404 TTC21AQ8NDW8 1320 aa25.68■■□□□ 1.7
TSPAN4-204ENST00000397404 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-204ENST00000397404 LRRC7Q96NW7 1537 aa25.66■■□□□ 1.7
TSPAN4-204ENST00000397404 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-204ENST00000397404 KIF1AQ12756 1690 aa25.65■■□□□ 1.7
TSPAN4-204ENST00000397404 FYB1O15117 783 aa25.65■■□□□ 1.7
TSPAN4-204ENST00000397404 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
TSPAN4-204ENST00000397404 PPP2R1AP30153 589 aa25.64■■□□□ 1.69
TSPAN4-204ENST00000397404 PHF8Q9UPP1 1060 aa25.64■■□□□ 1.69
TSPAN4-204ENST00000397404 INSRP06213 1382 aa25.63■■□□□ 1.69
TSPAN4-204ENST00000397404 SSH2Q76I76 1423 aa25.62■■□□□ 1.69
TSPAN4-204ENST00000397404 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-204ENST00000397404 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
TSPAN4-204ENST00000397404 ZNF335Q9H4Z2 1342 aaPredicted RBP25.6■■□□□ 1.69
TSPAN4-204ENST00000397404 NUTM2FA1L443 756 aa25.6■■□□□ 1.69
TSPAN4-204ENST00000397404 TTC21BQ7Z4L5 1316 aa25.59■■□□□ 1.69
TSPAN4-204ENST00000397404 CNGB1Q14028 1251 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms