RNA–Protein interactions for RNA: ENST00000397343.2

PGAM1P4-201, Transcript of phosphoglycerate mutase 1 pseudogene 4, humanhuman

BASIC

Gene PGAM1P4, Length 750 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P4-201ENST00000397343 SAFB2Q14151 953 aaKnown RBP eCLIP17.39■□□□□ 0.37
PGAM1P4-201ENST00000397343 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
PGAM1P4-201ENST00000397343 NCOA3Q9Y6Q9 1424 aa17.37■□□□□ 0.37
PGAM1P4-201ENST00000397343 XRN1Q8IZH2 1706 aaKnown RBP17.36■□□□□ 0.37
PGAM1P4-201ENST00000397343 HSPA1LP34931 641 aa17.36■□□□□ 0.37
PGAM1P4-201ENST00000397343 TMF1P82094 1093 aa17.36■□□□□ 0.37
PGAM1P4-201ENST00000397343 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
PGAM1P4-201ENST00000397343 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
PGAM1P4-201ENST00000397343 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
PGAM1P4-201ENST00000397343 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
PGAM1P4-201ENST00000397343 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
PGAM1P4-201ENST00000397343 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
PGAM1P4-201ENST00000397343 SBNO2Q9Y2G9 1366 aa17.34■□□□□ 0.37
PGAM1P4-201ENST00000397343 RBM33Q96EV2 1170 aaKnown RBP17.33■□□□□ 0.36
PGAM1P4-201ENST00000397343 TESK2Q96S53 571 aa17.33■□□□□ 0.36
PGAM1P4-201ENST00000397343 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.36
PGAM1P4-201ENST00000397343 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
PGAM1P4-201ENST00000397343 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
PGAM1P4-201ENST00000397343 MSH6P52701 1360 aa17.29■□□□□ 0.36
PGAM1P4-201ENST00000397343 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
PGAM1P4-201ENST00000397343 ATF3P18847 181 aa17.29■□□□□ 0.36
PGAM1P4-201ENST00000397343 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
PGAM1P4-201ENST00000397343 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
PGAM1P4-201ENST00000397343 ARHGEF28Q8N1W1 1705 aaKnown RBP17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
PGAM1P4-201ENST00000397343 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.36
PGAM1P4-201ENST00000397343 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
PGAM1P4-201ENST00000397343 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
PGAM1P4-201ENST00000397343 DCCP43146 1447 aa17.23■□□□□ 0.35
PGAM1P4-201ENST00000397343 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
PGAM1P4-201ENST00000397343 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
PGAM1P4-201ENST00000397343 DISP3Q9P2K9 1392 aa17.23■□□□□ 0.35
PGAM1P4-201ENST00000397343 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
PGAM1P4-201ENST00000397343 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
PGAM1P4-201ENST00000397343 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
PGAM1P4-201ENST00000397343 ADGRB2O60241 1585 aa17.2■□□□□ 0.34
PGAM1P4-201ENST00000397343 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
PGAM1P4-201ENST00000397343 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
PGAM1P4-201ENST00000397343 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
PGAM1P4-201ENST00000397343 KIF7Q2M1P5 1343 aa17.2■□□□□ 0.34
PGAM1P4-201ENST00000397343 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
PGAM1P4-201ENST00000397343 ILDR2Q71H61 639 aa17.19■□□□□ 0.34
PGAM1P4-201ENST00000397343 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
PGAM1P4-201ENST00000397343 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
PGAM1P4-201ENST00000397343 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
PGAM1P4-201ENST00000397343 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
PGAM1P4-201ENST00000397343 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
PGAM1P4-201ENST00000397343 TULP4Q9NRJ4 1543 aa17.17■□□□□ 0.34
PGAM1P4-201ENST00000397343 NINLQ9Y2I6 1382 aa17.16■□□□□ 0.34
PGAM1P4-201ENST00000397343 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
PGAM1P4-201ENST00000397343 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
PGAM1P4-201ENST00000397343 MST1RQ04912 1400 aa17.15■□□□□ 0.34
PGAM1P4-201ENST00000397343 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
PGAM1P4-201ENST00000397343 TERF2IPQ9NYB0 399 aa17.15■□□□□ 0.34
PGAM1P4-201ENST00000397343 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
PGAM1P4-201ENST00000397343 PHLPP1O60346 1717 aa17.15■□□□□ 0.34
PGAM1P4-201ENST00000397343 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
PGAM1P4-201ENST00000397343 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
PGAM1P4-201ENST00000397343 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
PGAM1P4-201ENST00000397343 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
PGAM1P4-201ENST00000397343 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
PGAM1P4-201ENST00000397343 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
PGAM1P4-201ENST00000397343 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
PGAM1P4-201ENST00000397343 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
PGAM1P4-201ENST00000397343 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
PGAM1P4-201ENST00000397343 ATP7BP35670 1465 aa17.11■□□□□ 0.33
PGAM1P4-201ENST00000397343 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
PGAM1P4-201ENST00000397343 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
PGAM1P4-201ENST00000397343 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
PGAM1P4-201ENST00000397343 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
PGAM1P4-201ENST00000397343 FMN2Q9NZ56 1722 aa17.09■□□□□ 0.33
PGAM1P4-201ENST00000397343 ACEP12821 1306 aa17.08■□□□□ 0.32
PGAM1P4-201ENST00000397343 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
PGAM1P4-201ENST00000397343 PANK3Q9H999 370 aa17.08■□□□□ 0.32
PGAM1P4-201ENST00000397343 PSME1Q06323 249 aa17.07■□□□□ 0.32
PGAM1P4-201ENST00000397343 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
PGAM1P4-201ENST00000397343 NPHP3Q7Z494 1330 aa17.06■□□□□ 0.32
PGAM1P4-201ENST00000397343 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
PGAM1P4-201ENST00000397343 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
PGAM1P4-201ENST00000397343 FOXO3O43524 673 aa17.05■□□□□ 0.32
PGAM1P4-201ENST00000397343 RGS17Q9UGC6 210 aaPredicted RBP17.05■□□□□ 0.32
PGAM1P4-201ENST00000397343 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
PGAM1P4-201ENST00000397343 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
PGAM1P4-201ENST00000397343 JCADQ9P266 1359 aa17.04■□□□□ 0.32
PGAM1P4-201ENST00000397343 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
PGAM1P4-201ENST00000397343 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
PGAM1P4-201ENST00000397343 LRP6O75581 1613 aa17.02■□□□□ 0.31
PGAM1P4-201ENST00000397343 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
PGAM1P4-201ENST00000397343 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
PGAM1P4-201ENST00000397343 A0A1W2PP64 1363 aa17.02■□□□□ 0.31
PGAM1P4-201ENST00000397343 ITSN1Q15811 1721 aa17■□□□□ 0.31
PGAM1P4-201ENST00000397343 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
PGAM1P4-201ENST00000397343 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
PGAM1P4-201ENST00000397343 CARD14Q9BXL6 1004 aa16.99■□□□□ 0.31
PGAM1P4-201ENST00000397343 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
PGAM1P4-201ENST00000397343 KIF1AQ12756 1690 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms