RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 NEUROD2Q15784 382 aa31.13■■■□□ 2.57
PABPN1-202ENST00000397276 DMRT2Q9Y5R5 561 aa31.13■■■□□ 2.57
PABPN1-202ENST00000397276 SKAP1Q86WV1 359 aa31.12■■■□□ 2.57
PABPN1-202ENST00000397276 GLI2P10070 1586 aa31.12■■■□□ 2.57
PABPN1-202ENST00000397276 ARHGAP31Q2M1Z3 1444 aa31.12■■■□□ 2.57
PABPN1-202ENST00000397276 PIK3C2BO00750 1634 aa31.11■■■□□ 2.57
PABPN1-202ENST00000397276 STAG3Q9UJ98 1225 aa31.09■■■□□ 2.57
PABPN1-202ENST00000397276 MTHFSP49914 203 aa31.08■■■□□ 2.57
PABPN1-202ENST00000397276 SRPK2P78362 688 aaKnown RBP31.08■■■□□ 2.57
PABPN1-202ENST00000397276 CGNL1Q0VF96 1302 aa31.08■■■□□ 2.57
PABPN1-202ENST00000397276 ZBTB47Q9UFB7 747 aaPredicted RBP31.08■■■□□ 2.57
PABPN1-202ENST00000397276 RRP7AQ9Y3A4 280 aaKnown RBP31.08■■■□□ 2.57
PABPN1-202ENST00000397276 POLR3AO14802 1390 aaPredicted RBP31.07■■■□□ 2.56
PABPN1-202ENST00000397276 MLECQ14165 292 aa31.06■■■□□ 2.56
PABPN1-202ENST00000397276 ZC3H13Q5T200 1668 aaKnown RBP31.06■■■□□ 2.56
PABPN1-202ENST00000397276 MINK1Q8N4C8 1332 aaPredicted RBP31.05■■■□□ 2.56
PABPN1-202ENST00000397276 TRMT2AQ8IZ69 625 aaKnown RBP31.04■■■□□ 2.56
PABPN1-202ENST00000397276 BCAR3O75815 825 aa31.03■■■□□ 2.56
PABPN1-202ENST00000397276 NPM2Q86SE8 214 aaKnown RBP31.03■■■□□ 2.56
PABPN1-202ENST00000397276 TULP4Q9NRJ4 1543 aa31.03■■■□□ 2.56
PABPN1-202ENST00000397276 PRAM1Q96QH2 718 aa31.02■■■□□ 2.56
PABPN1-202ENST00000397276 E9PSI1 815 aa31.01■■■□□ 2.56
PABPN1-202ENST00000397276 POGKQ9P215 609 aa31.01■■■□□ 2.56
PABPN1-202ENST00000397276 TCERG1O14776 1098 aaKnown RBP31■■■□□ 2.55
PABPN1-202ENST00000397276 WWC1Q8IX03 1113 aa31■■■□□ 2.55
PABPN1-202ENST00000397276 GOLGA6L2Q8N9W4 650 aaPredicted RBP31■■■□□ 2.55
PABPN1-202ENST00000397276 ARHGEF28Q8N1W1 1705 aaKnown RBP30.99■■■□□ 2.55
PABPN1-202ENST00000397276 TSPOAP1O95153 1857 aa30.98■■■□□ 2.55
PABPN1-202ENST00000397276 ANKRD36BQ8N2N9 1353 aa30.98■■■□□ 2.55
PABPN1-202ENST00000397276 MYO5BQ9ULV0 1848 aa30.98■■■□□ 2.55
PABPN1-202ENST00000397276 NKTRP30414 1462 aaKnown RBP30.96■■■□□ 2.55
PABPN1-202ENST00000397276 TCP11L2Q8N4U5 519 aa30.96■■■□□ 2.55
PABPN1-202ENST00000397276 RTL5Q5HYW3 569 aaPredicted RBP30.95■■■□□ 2.55
PABPN1-202ENST00000397276 PREX1Q8TCU6 1659 aa30.95■■■□□ 2.55
PABPN1-202ENST00000397276 RUNDC1Q96C34 613 aa30.95■■■□□ 2.55
PABPN1-202ENST00000397276 CFAP53Q96M91 514 aa30.95■■■□□ 2.55
PABPN1-202ENST00000397276 GGNBP2Q9H3C7 697 aa30.95■■■□□ 2.55
PABPN1-202ENST00000397276 PDE4AP27815 886 aa30.94■■■□□ 2.54
PABPN1-202ENST00000397276 PUS7Q96PZ0 661 aaKnown RBP30.94■■■□□ 2.54
PABPN1-202ENST00000397276 ZFYVE9O95405 1425 aa30.93■■■□□ 2.54
PABPN1-202ENST00000397276 RIMBP3CA6NJZ7 1639 aa30.93■■■□□ 2.54
PABPN1-202ENST00000397276 RIMBP3BA6NNM3 1639 aa30.93■■■□□ 2.54
PABPN1-202ENST00000397276 RIMBP3Q9UFD9 1639 aa30.93■■■□□ 2.54
PABPN1-202ENST00000397276 TMEM131LA2VDJ0 1609 aa30.92■■■□□ 2.54
PABPN1-202ENST00000397276 A0A1W2PP64 1363 aa30.92■■■□□ 2.54
PABPN1-202ENST00000397276 U2AF1L5P0DN76 240 aaPredicted RBP30.91■■■□□ 2.54
PABPN1-202ENST00000397276 U2AF1Q01081 240 aaKnown RBP eCLIP30.91■■■□□ 2.547e-10■■■□□ 16.4
PABPN1-202ENST00000397276 YTHDC2Q9H6S0 1430 aaKnown RBP30.89■■■□□ 2.53
PABPN1-202ENST00000397276 NGEFQ8N5V2 710 aa30.88■■■□□ 2.53
PABPN1-202ENST00000397276 DIP2BQ9P265 1576 aa30.88■■■□□ 2.53
PABPN1-202ENST00000397276 LAS1LQ9Y4W2 734 aaKnown RBP30.87■■■□□ 2.53
PABPN1-202ENST00000397276 SHPRHQ149N8 1683 aa30.86■■■□□ 2.53
PABPN1-202ENST00000397276 PTPRMP28827 1452 aa30.85■■■□□ 2.53
PABPN1-202ENST00000397276 CDK19Q9BWU1 502 aa30.85■■■□□ 2.53
PABPN1-202ENST00000397276 BACH2Q9BYV9 841 aa30.85■■■□□ 2.53
PABPN1-202ENST00000397276 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
PABPN1-202ENST00000397276 KDM2BQ8NHM5 1336 aa30.84■■■□□ 2.53
PABPN1-202ENST00000397276 U2SURPO15042 1029 aaKnown RBP30.83■■■□□ 2.53
PABPN1-202ENST00000397276 CANXP27824 592 aaKnown RBP30.83■■■□□ 2.53
PABPN1-202ENST00000397276 MS4A1P11836 297 aa30.83■■■□□ 2.53
PABPN1-202ENST00000397276 TERF2IPQ9NYB0 399 aa30.83■■■□□ 2.53
PABPN1-202ENST00000397276 FRAT1Q92837 279 aaPredicted RBP30.82■■■□□ 2.52
PABPN1-202ENST00000397276 CABP1Q9NZU7 370 aa30.82■■■□□ 2.52
PABPN1-202ENST00000397276 FYB1O15117 783 aa30.81■■■□□ 2.52
PABPN1-202ENST00000397276 NSD2O96028 1365 aa30.81■■■□□ 2.52
PABPN1-202ENST00000397276 CENPQQ7L2Z9 268 aaPredicted RBP30.81■■■□□ 2.52
PABPN1-202ENST00000397276 IL27Q8NEV9 243 aa30.8■■■□□ 2.52
PABPN1-202ENST00000397276 ABCC11Q96J66 1382 aa30.79■■■□□ 2.52
PABPN1-202ENST00000397276 USP32Q8NFA0 1604 aa30.79■■■□□ 2.52
PABPN1-202ENST00000397276 ATAD2Q6PL18 1390 aa30.79■■■□□ 2.52
PABPN1-202ENST00000397276 ALKQ9UM73 1620 aa30.78■■■□□ 2.52
PABPN1-202ENST00000397276 PANK1Q8TE04 598 aa30.78■■■□□ 2.52
PABPN1-202ENST00000397276 BCL2L13Q9BXK5 485 aa30.77■■■□□ 2.52
PABPN1-202ENST00000397276 COG6Q9Y2V7 657 aa30.76■■■□□ 2.51
PABPN1-202ENST00000397276 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
PABPN1-202ENST00000397276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.75■■■□□ 2.51
PABPN1-202ENST00000397276 ANO8Q9HCE9 1232 aaPredicted RBP30.74■■■□□ 2.51
PABPN1-202ENST00000397276 CLTCQ00610 1675 aaKnown RBP30.74■■■□□ 2.51
PABPN1-202ENST00000397276 NINLQ9Y2I6 1382 aa30.74■■■□□ 2.51
PABPN1-202ENST00000397276 FBLN1P23142 703 aa30.74■■■□□ 2.51
PABPN1-202ENST00000397276 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
PABPN1-202ENST00000397276 ESF1Q9H501 851 aaKnown RBP30.73■■■□□ 2.51
PABPN1-202ENST00000397276 RTN4Q9NQC3 1192 aaKnown RBP30.73■■■□□ 2.51
PABPN1-202ENST00000397276 RGS3P49796 1198 aa30.73■■■□□ 2.51
PABPN1-202ENST00000397276 WDR63Q8IWG1 891 aa30.73■■■□□ 2.51
PABPN1-202ENST00000397276 IQSEC2Q5JU85 1478 aa30.73■■■□□ 2.51
PABPN1-202ENST00000397276 PPP6R1Q9UPN7 881 aa30.72■■■□□ 2.51
PABPN1-202ENST00000397276 NEFMP07197 916 aa30.72■■■□□ 2.51
PABPN1-202ENST00000397276 RARSP54136 660 aaKnown RBP30.71■■■□□ 2.51
PABPN1-202ENST00000397276 A2ML1A8K2U0 1454 aa30.71■■■□□ 2.51
PABPN1-202ENST00000397276 RIMS2Q9UQ26 1411 aa30.7■■■□□ 2.51
PABPN1-202ENST00000397276 CD163L1Q9NR16 1453 aa30.7■■■□□ 2.51
PABPN1-202ENST00000397276 PPM1GO15355 546 aaPredicted RBP30.7■■■□□ 2.51
PABPN1-202ENST00000397276 TNNQ9UQP3 1299 aa30.69■■■□□ 2.5
PABPN1-202ENST00000397276 IGHDP01880 384 aa30.67■■■□□ 2.5
PABPN1-202ENST00000397276 PDE3AQ14432 1141 aa30.67■■■□□ 2.5
PABPN1-202ENST00000397276 CCDC27Q2M243 656 aa30.67■■■□□ 2.5
PABPN1-202ENST00000397276 TSR2Q969E8 191 aaKnown RBP30.66■■■□□ 2.5
PABPN1-202ENST00000397276 AGLP35573 1532 aa30.66■■■□□ 2.5
PABPN1-202ENST00000397276 CLUAP1Q96AJ1 413 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms