RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 WWC1Q8IX03 1113 aa21.56■■□□□ 1.04
FGFR1-206ENST00000397091 NCAPD3P42695 1498 aa21.56■■□□□ 1.04
FGFR1-206ENST00000397091 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
FGFR1-206ENST00000397091 TOM1L2Q6ZVM7 507 aa21.56■■□□□ 1.04
FGFR1-206ENST00000397091 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
FGFR1-206ENST00000397091 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
FGFR1-206ENST00000397091 NEUROD6Q96NK8 337 aa21.56■■□□□ 1.04
FGFR1-206ENST00000397091 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
FGFR1-206ENST00000397091 FYB1O15117 783 aa21.55■■□□□ 1.04
FGFR1-206ENST00000397091 PLIN1O60240 522 aa21.55■■□□□ 1.04
FGFR1-206ENST00000397091 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
FGFR1-206ENST00000397091 ZKSCAN1P17029 563 aaPredicted RBP21.54■■□□□ 1.04
FGFR1-206ENST00000397091 FOXD4L5Q5VV16 416 aaPredicted RBP21.54■■□□□ 1.04
FGFR1-206ENST00000397091 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
FGFR1-206ENST00000397091 FOXD4L4Q8WXT5 416 aaPredicted RBP21.54■■□□□ 1.04
FGFR1-206ENST00000397091 CPLX1O14810 134 aa21.54■■□□□ 1.04
FGFR1-206ENST00000397091 ANKRD50Q9ULJ7 1429 aa21.54■■□□□ 1.04
FGFR1-206ENST00000397091 MCTP1Q6DN14 999 aa21.54■■□□□ 1.04
FGFR1-206ENST00000397091 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
FGFR1-206ENST00000397091 CUX1P39880 1505 aa21.53■■□□□ 1.04
FGFR1-206ENST00000397091 RUNDC1Q96C34 613 aa21.52■■□□□ 1.04
FGFR1-206ENST00000397091 HSP90AB4PQ58FF6 505 aa21.52■■□□□ 1.04
FGFR1-206ENST00000397091 CCAR1Q8IX12 1150 aaKnown RBP21.52■■□□□ 1.04
FGFR1-206ENST00000397091 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
FGFR1-206ENST00000397091 MAP7D2Q96T17 732 aa21.52■■□□□ 1.04
FGFR1-206ENST00000397091 CHMP5Q9NZZ3 219 aa21.52■■□□□ 1.04
FGFR1-206ENST00000397091 TPM3P06753 285 aa21.52■■□□□ 1.03
FGFR1-206ENST00000397091 TPM2P07951 284 aa21.52■■□□□ 1.03
FGFR1-206ENST00000397091 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
FGFR1-206ENST00000397091 DDX19BQ9UMR2 479 aa21.51■■□□□ 1.03
FGFR1-206ENST00000397091 ANO2Q9NQ90 1003 aa21.5■■□□□ 1.03
FGFR1-206ENST00000397091 DDX54Q8TDD1 881 aaKnown RBP21.5■■□□□ 1.03
FGFR1-206ENST00000397091 PRAM1Q96QH2 718 aa21.49■■□□□ 1.03
FGFR1-206ENST00000397091 COG6Q9Y2V7 657 aa21.49■■□□□ 1.03
FGFR1-206ENST00000397091 GAS2L2Q8NHY3 880 aa21.49■■□□□ 1.03
FGFR1-206ENST00000397091 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
FGFR1-206ENST00000397091 FYCO1Q9BQS8 1478 aa21.49■■□□□ 1.03
FGFR1-206ENST00000397091 CCDC47Q96A33 483 aaKnown RBP21.49■■□□□ 1.03
FGFR1-206ENST00000397091 MTERF4Q7Z6M4 381 aaKnown RBP21.48■■□□□ 1.03
FGFR1-206ENST00000397091 WASHC4Q2M389 1173 aa21.48■■□□□ 1.03
FGFR1-206ENST00000397091 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
FGFR1-206ENST00000397091 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-206ENST00000397091 RNF20Q5VTR2 975 aa21.48■■□□□ 1.03
FGFR1-206ENST00000397091 PRDM11Q9NQV5 511 aa21.48■■□□□ 1.03
FGFR1-206ENST00000397091 IKQ13123 557 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-206ENST00000397091 TSR1Q2NL82 804 aaKnown RBP21.47■■□□□ 1.03
FGFR1-206ENST00000397091 MRE11P49959 708 aa21.47■■□□□ 1.03
FGFR1-206ENST00000397091 FGD6Q6ZV73 1430 aa21.47■■□□□ 1.03
FGFR1-206ENST00000397091 SCAPERQ9BY12 1400 aa21.47■■□□□ 1.03
FGFR1-206ENST00000397091 CFAP70Q5T0N1 1121 aa21.46■■□□□ 1.03
FGFR1-206ENST00000397091 SLC26A8Q96RN1 970 aa21.46■■□□□ 1.03
FGFR1-206ENST00000397091 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
FGFR1-206ENST00000397091 ERC2O15083 957 aa21.45■■□□□ 1.02
FGFR1-206ENST00000397091 CABP4P57796 275 aa21.45■■□□□ 1.02
FGFR1-206ENST00000397091 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
FGFR1-206ENST00000397091 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
FGFR1-206ENST00000397091 REC8O95072 547 aa21.43■■□□□ 1.02
FGFR1-206ENST00000397091 R3HCC1Q9Y3T6 440 aaKnown RBP21.42■■□□□ 1.02
FGFR1-206ENST00000397091 RALYLQ86SE5 291 aaKnown RBP21.42■■□□□ 1.02
FGFR1-206ENST00000397091 NESP48681 1621 aa21.42■■□□□ 1.02
FGFR1-206ENST00000397091 PODXL2Q9NZ53 605 aa21.42■■□□□ 1.02
FGFR1-206ENST00000397091 SLC52A1Q9NWF4 448 aa21.42■■□□□ 1.02
FGFR1-206ENST00000397091 SPG7Q9UQ90 795 aa21.42■■□□□ 1.02
FGFR1-206ENST00000397091 MTMR7Q9Y216 660 aa21.42■■□□□ 1.02
FGFR1-206ENST00000397091 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
FGFR1-206ENST00000397091 CCDC30Q5VVM6 783 aa21.4■■□□□ 1.02
FGFR1-206ENST00000397091 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
FGFR1-206ENST00000397091 TPM1P09493 284 aa21.39■■□□□ 1.01
FGFR1-206ENST00000397091 FOXD4L6Q3SYB3 417 aaPredicted RBP21.39■■□□□ 1.01
FGFR1-206ENST00000397091 TEX35Q5T0J7 233 aa21.39■■□□□ 1.01
FGFR1-206ENST00000397091 FOXD4L3Q6VB84 417 aaPredicted RBP21.39■■□□□ 1.01
FGFR1-206ENST00000397091 GPS2Q13227 327 aa21.38■■□□□ 1.01
FGFR1-206ENST00000397091 PCMTD1Q96MG8 357 aaPredicted RBP21.38■■□□□ 1.01
FGFR1-206ENST00000397091 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
FGFR1-206ENST00000397091 CDK19Q9BWU1 502 aa21.38■■□□□ 1.01
FGFR1-206ENST00000397091 ZNF592Q92610 1267 aa21.37■■□□□ 1.01
FGFR1-206ENST00000397091 HMGB2P26583 209 aaKnown RBP21.37■■□□□ 1.01
FGFR1-206ENST00000397091 CNNM1Q9NRU3 951 aa21.37■■□□□ 1.01
FGFR1-206ENST00000397091 NCOA2Q15596 1464 aa21.37■■□□□ 1.01
FGFR1-206ENST00000397091 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
FGFR1-206ENST00000397091 SAFBQ15424 915 aaKnown RBP eCLIP21.37■■□□□ 1.01
FGFR1-206ENST00000397091 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
FGFR1-206ENST00000397091 MTHFSP49914 203 aa21.36■■□□□ 1.01
FGFR1-206ENST00000397091 GNL3LQ9NVN8 582 aaKnown RBP21.36■■□□□ 1.01
FGFR1-206ENST00000397091 BECN2A8MW95 431 aa21.35■■□□□ 1.01
FGFR1-206ENST00000397091 GOLGA6L19H0YKK7 550 aa21.35■■□□□ 1.01
FGFR1-206ENST00000397091 ZNF530Q6P9A1 599 aaPredicted RBP21.34■■□□□ 1.01
FGFR1-206ENST00000397091 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
FGFR1-206ENST00000397091 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
FGFR1-206ENST00000397091 NASPP49321 788 aaPredicted RBP21.33■■□□□ 1.01
FGFR1-206ENST00000397091 ANKRD20A12PQ8NF67 263 aa21.33■■□□□ 1
FGFR1-206ENST00000397091 SLC3A2P08195 630 aaKnown RBP21.32■■□□□ 1
FGFR1-206ENST00000397091 PRKAR2BP31323 418 aa21.32■■□□□ 1
FGFR1-206ENST00000397091 BRMS1Q9HCU9 246 aa21.32■■□□□ 1
FGFR1-206ENST00000397091 CABP1Q9NZU7 370 aa21.32■■□□□ 1
FGFR1-206ENST00000397091 HOOK1Q9UJC3 728 aaKnown RBP21.32■■□□□ 1
FGFR1-206ENST00000397091 RTEL1-TNFRSF6BF6WH68 1400 aa21.32■■□□□ 1
FGFR1-206ENST00000397091 RRP9O43818 475 aaKnown RBP21.31■■□□□ 1
FGFR1-206ENST00000397091 RBM5P52756 815 aaKnown RBP eCLIP21.31■■□□□ 1
FGFR1-206ENST00000397091 CCDC39Q9UFE4 941 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms