RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
RAPGEF4-203ENST00000397087 SLIT1O75093 1534 aa8.14□□□□□ -1.11
RAPGEF4-203ENST00000397087 FAM135BQ49AJ0 1406 aa8.14□□□□□ -1.11
RAPGEF4-203ENST00000397087 NLRP1Q9C000 1473 aa8.14□□□□□ -1.11
RAPGEF4-203ENST00000397087 NUDCQ9Y266 331 aa8.14□□□□□ -1.11
RAPGEF4-203ENST00000397087 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
RAPGEF4-203ENST00000397087 AFAP1Q8N556 730 aa8.13□□□□□ -1.11
RAPGEF4-203ENST00000397087 C3P01024 1663 aa8.13□□□□□ -1.11
RAPGEF4-203ENST00000397087 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
RAPGEF4-203ENST00000397087 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
RAPGEF4-203ENST00000397087 ARHGAP23Q9P227 1491 aa8.11□□□□□ -1.11
RAPGEF4-203ENST00000397087 ZNF521Q96K83 1311 aa8.11□□□□□ -1.11
RAPGEF4-203ENST00000397087 XRN1Q8IZH2 1706 aaKnown RBP8.11□□□□□ -1.11
RAPGEF4-203ENST00000397087 ANKRD36BQ8N2N9 1353 aa8.11□□□□□ -1.11
RAPGEF4-203ENST00000397087 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 DCAF8L1A6NGE4 600 aa8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 YEATS2Q9ULM3 1422 aa8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-203ENST00000397087 PHRF1Q9P1Y6 1649 aaKnown RBP8.09□□□□□ -1.11
RAPGEF4-203ENST00000397087 AAMPQ13685 434 aa8.09□□□□□ -1.11
RAPGEF4-203ENST00000397087 ATAD2Q6PL18 1390 aa8.09□□□□□ -1.11
RAPGEF4-203ENST00000397087 KIF3BO15066 747 aa8.09□□□□□ -1.12
RAPGEF4-203ENST00000397087 VGFO15240 615 aaPredicted RBP8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 ABCC11Q96J66 1382 aa8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 TRMT2AQ8IZ69 625 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 FER1L4A9Z1Z3 1794 aa8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 CD163L1Q9NR16 1453 aa8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 ERICH6Q7L0X2 663 aa8.08□□□□□ -1.12
RAPGEF4-203ENST00000397087 NBPF1Q3BBV0 1214 aa8.07□□□□□ -1.12
RAPGEF4-203ENST00000397087 RGPD1P0DJD0 1748 aa8.07□□□□□ -1.12
RAPGEF4-203ENST00000397087 N4BP2Q86UW6 1770 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-203ENST00000397087 HNRNPUQ00839 825 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAPGEF4-203ENST00000397087 LMTK3Q96Q04 1460 aa8.06□□□□□ -1.12
RAPGEF4-203ENST00000397087 CENPJQ9HC77 1338 aaPredicted RBP8.06□□□□□ -1.12
RAPGEF4-203ENST00000397087 YTHDC2Q9H6S0 1430 aaKnown RBP8.06□□□□□ -1.12
RAPGEF4-203ENST00000397087 CCDC27Q2M243 656 aa8.06□□□□□ -1.12
RAPGEF4-203ENST00000397087 FANCIQ9NVI1 1328 aa8.05□□□□□ -1.12
RAPGEF4-203ENST00000397087 RNF39Q9H2S5 420 aa8.05□□□□□ -1.12
RAPGEF4-203ENST00000397087 CGNL1Q0VF96 1302 aa8.05□□□□□ -1.12
RAPGEF4-203ENST00000397087 PTCH1Q13635 1447 aa8.05□□□□□ -1.12
RAPGEF4-203ENST00000397087 PNPLA6Q8IY17 1366 aa8.05□□□□□ -1.12
RAPGEF4-203ENST00000397087 FMN2Q9NZ56 1722 aa8.04□□□□□ -1.12
RAPGEF4-203ENST00000397087 PPIP5K1Q6PFW1 1433 aa8.04□□□□□ -1.12
RAPGEF4-203ENST00000397087 ADGRF5Q8IZF2 1346 aa8.04□□□□□ -1.12
RAPGEF4-203ENST00000397087 CCDC184Q52MB2 194 aa8.04□□□□□ -1.12
RAPGEF4-203ENST00000397087 FAM9BQ8IZU0 186 aa8.04□□□□□ -1.12
RAPGEF4-203ENST00000397087 TSPOAP1O95153 1857 aa8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 CPSF1Q10570 1443 aaKnown RBP8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 TMC1Q8TDI8 760 aa8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 NWD1Q149M9 1564 aa8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
RAPGEF4-203ENST00000397087 CT47B1P0C2W7 299 aaPredicted RBP8.02□□□□□ -1.12
RAPGEF4-203ENST00000397087 PANK3Q9H999 370 aa8.02□□□□□ -1.12
RAPGEF4-203ENST00000397087 NKTRP30414 1462 aaKnown RBP8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 CDK12Q9NYV4 1490 aaPredicted RBP8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 ADAMTSL3P82987 1691 aa8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 PIK3R4Q99570 1358 aa8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 ABCC6O95255 1503 aa8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 EVC2Q86UK5 1308 aa8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 PLEKHG1Q9ULL1 1385 aa8.02□□□□□ -1.13
RAPGEF4-203ENST00000397087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 RIMS2Q9UQ26 1411 aa8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 MARF1Q9Y4F3 1742 aaKnown RBP8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 SALL2Q9Y467 1007 aaPredicted RBP8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 LRRC37A3O60309 1634 aa8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 TSHZ2Q9NRE2 1034 aa8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 KNSTRNQ9Y448 316 aa8.01□□□□□ -1.13
RAPGEF4-203ENST00000397087 CAMTA1Q9Y6Y1 1673 aa8□□□□□ -1.13
RAPGEF4-203ENST00000397087 EDC4Q6P2E9 1401 aaKnown RBP8□□□□□ -1.13
RAPGEF4-203ENST00000397087 ATXN8OSP0DMR3 200 aa8□□□□□ -1.13
RAPGEF4-203ENST00000397087 MST1RQ04912 1400 aa8□□□□□ -1.13
RAPGEF4-203ENST00000397087 IL16Q14005 1332 aa7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 MS4A1P11836 297 aa7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 KDM2AQ9Y2K7 1162 aa7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 ANKARQ7Z5J8 1434 aa7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 NSD3Q9BZ95 1437 aa7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 CHD2O14647 1828 aaKnown RBP7.99□□□□□ -1.13
RAPGEF4-203ENST00000397087 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
RAPGEF4-203ENST00000397087 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
RAPGEF4-203ENST00000397087 KIF24Q5T7B8 1368 aa7.98□□□□□ -1.13
RAPGEF4-203ENST00000397087 WDR63Q8IWG1 891 aa7.97□□□□□ -1.13
RAPGEF4-203ENST00000397087 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
RAPGEF4-203ENST00000397087 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.13
RAPGEF4-203ENST00000397087 ADAMTS13Q76LX8 1427 aa7.96□□□□□ -1.14
RAPGEF4-203ENST00000397087 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 CEP170BQ9Y4F5 1589 aaPredicted RBP7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 TNRQ92752 1358 aa7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 RGL3Q3MIN7 710 aa7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 SSH2Q76I76 1423 aa7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 TMEM2Q9UHN6 1383 aa7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 BRPF1P55201 1214 aaPredicted RBP7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 PNNQ9H307 717 aaKnown RBP7.95□□□□□ -1.14
RAPGEF4-203ENST00000397087 E9PSI1 815 aa7.94□□□□□ -1.14
RAPGEF4-203ENST00000397087 SLFN5Q08AF3 891 aa7.94□□□□□ -1.14
RAPGEF4-203ENST00000397087 CARD14Q9BXL6 1004 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms