RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PER1O15534 1290 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-209ENST00000397036 LMTK3Q96Q04 1460 aa18.72■□□□□ 0.59
MCF2L-209ENST00000397036 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
MCF2L-209ENST00000397036 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
MCF2L-209ENST00000397036 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.58
MCF2L-209ENST00000397036 SAFB2Q14151 953 aaKnown RBP eCLIP18.7■□□□□ 0.58
MCF2L-209ENST00000397036 PANK3Q9H999 370 aa18.7■□□□□ 0.58
MCF2L-209ENST00000397036 ATAD2Q6PL18 1390 aa18.7■□□□□ 0.58
MCF2L-209ENST00000397036 MINK1Q8N4C8 1332 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-209ENST00000397036 KCNA6P17658 529 aa18.69■□□□□ 0.58
MCF2L-209ENST00000397036 WASLO00401 505 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-209ENST00000397036 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
MCF2L-209ENST00000397036 XRN1Q8IZH2 1706 aaKnown RBP18.67■□□□□ 0.58
MCF2L-209ENST00000397036 CCER2I3L3R5 266 aa18.67■□□□□ 0.58
MCF2L-209ENST00000397036 KTN1Q86UP2 1357 aaKnown RBP18.67■□□□□ 0.58
MCF2L-209ENST00000397036 PRKRIP1Q9H875 184 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-209ENST00000397036 HSPA2P54652 639 aa18.65■□□□□ 0.58
MCF2L-209ENST00000397036 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
MCF2L-209ENST00000397036 CABP2Q9NPB3 220 aa18.65■□□□□ 0.58
MCF2L-209ENST00000397036 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
MCF2L-209ENST00000397036 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.57
MCF2L-209ENST00000397036 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
MCF2L-209ENST00000397036 SLC12A5Q9H2X9 1139 aa18.63■□□□□ 0.57
MCF2L-209ENST00000397036 RALBP1Q15311 655 aa18.62■□□□□ 0.57
MCF2L-209ENST00000397036 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
MCF2L-209ENST00000397036 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
MCF2L-209ENST00000397036 TMC1Q8TDI8 760 aa18.6■□□□□ 0.57
MCF2L-209ENST00000397036 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
MCF2L-209ENST00000397036 MYOM1P52179 1685 aa18.6■□□□□ 0.57
MCF2L-209ENST00000397036 NWD1Q149M9 1564 aa18.6■□□□□ 0.57
MCF2L-209ENST00000397036 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-209ENST00000397036 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
MCF2L-209ENST00000397036 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
MCF2L-209ENST00000397036 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-209ENST00000397036 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.56
MCF2L-209ENST00000397036 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
MCF2L-209ENST00000397036 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
MCF2L-209ENST00000397036 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
MCF2L-209ENST00000397036 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
MCF2L-209ENST00000397036 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
MCF2L-209ENST00000397036 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
MCF2L-209ENST00000397036 STRCQ7RTU9 1775 aa18.54■□□□□ 0.56
MCF2L-209ENST00000397036 ATP7BP35670 1465 aa18.54■□□□□ 0.56
MCF2L-209ENST00000397036 HDGFL2Q7Z4V5 671 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-209ENST00000397036 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
MCF2L-209ENST00000397036 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
MCF2L-209ENST00000397036 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
MCF2L-209ENST00000397036 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-209ENST00000397036 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.56
MCF2L-209ENST00000397036 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-209ENST00000397036 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
MCF2L-209ENST00000397036 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
MCF2L-209ENST00000397036 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
MCF2L-209ENST00000397036 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
MCF2L-209ENST00000397036 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
MCF2L-209ENST00000397036 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
MCF2L-209ENST00000397036 NSD2O96028 1365 aa18.5■□□□□ 0.55
MCF2L-209ENST00000397036 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
MCF2L-209ENST00000397036 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-209ENST00000397036 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
MCF2L-209ENST00000397036 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
MCF2L-209ENST00000397036 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
MCF2L-209ENST00000397036 NLRP13Q86W25 1043 aa18.47■□□□□ 0.55
MCF2L-209ENST00000397036 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-209ENST00000397036 DCCP43146 1447 aa18.45■□□□□ 0.54
MCF2L-209ENST00000397036 EDC4Q6P2E9 1401 aaKnown RBP18.45■□□□□ 0.54
MCF2L-209ENST00000397036 POLR3AO14802 1390 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-209ENST00000397036 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
MCF2L-209ENST00000397036 FYB1O15117 783 aa18.43■□□□□ 0.54
MCF2L-209ENST00000397036 TOPAZ1Q8N9V7 1692 aa18.42■□□□□ 0.54
MCF2L-209ENST00000397036 ACEP12821 1306 aa18.42■□□□□ 0.54
MCF2L-209ENST00000397036 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
MCF2L-209ENST00000397036 C14orf37Q86TY3 774 aa18.42■□□□□ 0.54
MCF2L-209ENST00000397036 NALCNQ8IZF0 1738 aa18.42■□□□□ 0.54
MCF2L-209ENST00000397036 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
MCF2L-209ENST00000397036 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
MCF2L-209ENST00000397036 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
MCF2L-209ENST00000397036 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
MCF2L-209ENST00000397036 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
MCF2L-209ENST00000397036 NUTM2FA1L443 756 aa18.39■□□□□ 0.54
MCF2L-209ENST00000397036 CCDC184Q52MB2 194 aa18.39■□□□□ 0.54
MCF2L-209ENST00000397036 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.54
MCF2L-209ENST00000397036 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
MCF2L-209ENST00000397036 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-209ENST00000397036 USP6P35125 1406 aa18.38■□□□□ 0.53
MCF2L-209ENST00000397036 ITSN1Q15811 1721 aa18.38■□□□□ 0.53
MCF2L-209ENST00000397036 CNGB1Q14028 1251 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-209ENST00000397036 PHF8Q9UPP1 1060 aa18.38■□□□□ 0.53
MCF2L-209ENST00000397036 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
MCF2L-209ENST00000397036 ATF3P18847 181 aa18.37■□□□□ 0.53
MCF2L-209ENST00000397036 NGDNQ8NEJ9 315 aaKnown RBP18.37■□□□□ 0.53
MCF2L-209ENST00000397036 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
MCF2L-209ENST00000397036 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
MCF2L-209ENST00000397036 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
MCF2L-209ENST00000397036 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
MCF2L-209ENST00000397036 MSH6P52701 1360 aa18.36■□□□□ 0.53
MCF2L-209ENST00000397036 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
MCF2L-209ENST00000397036 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
MCF2L-209ENST00000397036 MON2Q7Z3U7 1717 aa18.34■□□□□ 0.53
MCF2L-209ENST00000397036 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms