RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 FAM135BQ49AJ0 1406 aa24.4■■□□□ 1.5
HLA-A-204ENST00000396634 USP47Q96K76 1375 aa24.39■■□□□ 1.49
HLA-A-204ENST00000396634 ADGRL3Q9HAR2 1447 aa24.37■■□□□ 1.49
HLA-A-204ENST00000396634 CENPJQ9HC77 1338 aaPredicted RBP24.36■■□□□ 1.49
HLA-A-204ENST00000396634 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
HLA-A-204ENST00000396634 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
HLA-A-204ENST00000396634 MSH6P52701 1360 aa24.33■■□□□ 1.48
HLA-A-204ENST00000396634 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.48
HLA-A-204ENST00000396634 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
HLA-A-204ENST00000396634 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
HLA-A-204ENST00000396634 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
HLA-A-204ENST00000396634 HSPA5P11021 654 aaKnown RBP24.29■■□□□ 1.48
HLA-A-204ENST00000396634 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
HLA-A-204ENST00000396634 ADGRB2O60241 1585 aa24.28■■□□□ 1.48
HLA-A-204ENST00000396634 TULP4Q9NRJ4 1543 aa24.28■■□□□ 1.48
HLA-A-204ENST00000396634 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
HLA-A-204ENST00000396634 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
HLA-A-204ENST00000396634 ATF3P18847 181 aa24.26■■□□□ 1.47
HLA-A-204ENST00000396634 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
HLA-A-204ENST00000396634 EIF4G2P78344 907 aaKnown RBP eCLIP24.25■■□□□ 1.47
HLA-A-204ENST00000396634 TESK2Q96S53 571 aa24.25■■□□□ 1.47
HLA-A-204ENST00000396634 USP32Q8NFA0 1604 aa24.23■■□□□ 1.47
HLA-A-204ENST00000396634 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
HLA-A-204ENST00000396634 PIP4K2BP78356 416 aa24.22■■□□□ 1.47
HLA-A-204ENST00000396634 MST1RQ04912 1400 aa24.22■■□□□ 1.47
HLA-A-204ENST00000396634 SCAF1Q9H7N4 1312 aaKnown RBP24.22■■□□□ 1.47
HLA-A-204ENST00000396634 DCCP43146 1447 aa24.22■■□□□ 1.47
HLA-A-204ENST00000396634 WASLO00401 505 aaPredicted RBP24.21■■□□□ 1.47
HLA-A-204ENST00000396634 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
HLA-A-204ENST00000396634 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
HLA-A-204ENST00000396634 DISP3Q9P2K9 1392 aa24.21■■□□□ 1.47
HLA-A-204ENST00000396634 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
HLA-A-204ENST00000396634 PRR36Q9H6K5 1346 aa24.19■■□□□ 1.46
HLA-A-204ENST00000396634 SRPK2P78362 688 aaKnown RBP24.18■■□□□ 1.46
HLA-A-204ENST00000396634 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
HLA-A-204ENST00000396634 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
HLA-A-204ENST00000396634 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
HLA-A-204ENST00000396634 ORAI2Q96SN7 254 aa24.17■■□□□ 1.46
HLA-A-204ENST00000396634 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
HLA-A-204ENST00000396634 ATP7BP35670 1465 aa24.16■■□□□ 1.46
HLA-A-204ENST00000396634 EVC2Q86UK5 1308 aa24.15■■□□□ 1.46
HLA-A-204ENST00000396634 TOM1O60784 492 aa24.15■■□□□ 1.46
HLA-A-204ENST00000396634 DDX17Q92841 729 aaKnown RBP24.13■■□□□ 1.45
HLA-A-204ENST00000396634 ESCO1Q5FWF5 840 aa24.13■■□□□ 1.45
HLA-A-204ENST00000396634 C11orf95C9JLR9 678 aaPredicted RBP24.12■■□□□ 1.45
HLA-A-204ENST00000396634 NUDT16Q96DE0 195 aaKnown RBP24.12■■□□□ 1.45
HLA-A-204ENST00000396634 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
HLA-A-204ENST00000396634 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
HLA-A-204ENST00000396634 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
HLA-A-204ENST00000396634 PMFBP1Q8TBY8 1022 aa24.11■■□□□ 1.45
HLA-A-204ENST00000396634 ITSN1Q15811 1721 aa24.09■■□□□ 1.45
HLA-A-204ENST00000396634 TMF1P82094 1093 aa24.09■■□□□ 1.45
HLA-A-204ENST00000396634 ANKARQ7Z5J8 1434 aa24.08■■□□□ 1.44
HLA-A-204ENST00000396634 XPCQ01831 940 aaPredicted RBP24.07■■□□□ 1.44
HLA-A-204ENST00000396634 PPIP5K1Q6PFW1 1433 aa24.06■■□□□ 1.44
HLA-A-204ENST00000396634 MYOM1P52179 1685 aa24.04■■□□□ 1.44
HLA-A-204ENST00000396634 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
HLA-A-204ENST00000396634 FOXO3O43524 673 aa24.03■■□□□ 1.44
HLA-A-204ENST00000396634 PHF8Q9UPP1 1060 aa24.03■■□□□ 1.44
HLA-A-204ENST00000396634 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
HLA-A-204ENST00000396634 CCDC61Q9Y6R9 512 aa24.02■■□□□ 1.44
HLA-A-204ENST00000396634 KIF1AQ12756 1690 aa24.01■■□□□ 1.43
HLA-A-204ENST00000396634 NHSL1Q5SYE7 1610 aa24.01■■□□□ 1.43
HLA-A-204ENST00000396634 SLC12A5Q9H2X9 1139 aa24■■□□□ 1.43
HLA-A-204ENST00000396634 KIF7Q2M1P5 1343 aa24■■□□□ 1.43
HLA-A-204ENST00000396634 ATAD2Q6PL18 1390 aa24■■□□□ 1.43
HLA-A-204ENST00000396634 PHLPP1O60346 1717 aa23.99■■□□□ 1.43
HLA-A-204ENST00000396634 FBXO41Q8TF61 875 aa23.99■■□□□ 1.43
HLA-A-204ENST00000396634 ACEP12821 1306 aa23.98■■□□□ 1.43
HLA-A-204ENST00000396634 NGDNQ8NEJ9 315 aaKnown RBP23.98■■□□□ 1.43
HLA-A-204ENST00000396634 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
HLA-A-204ENST00000396634 HSPA1LP34931 641 aa23.96■■□□□ 1.43
HLA-A-204ENST00000396634 AKAP12Q02952 1782 aa23.95■■□□□ 1.42
HLA-A-204ENST00000396634 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.42
HLA-A-204ENST00000396634 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.42
HLA-A-204ENST00000396634 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
HLA-A-204ENST00000396634 PXDNQ92626 1479 aa23.94■■□□□ 1.42
HLA-A-204ENST00000396634 COL16A1Q07092 1604 aaPredicted RBP23.93■■□□□ 1.42
HLA-A-204ENST00000396634 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
HLA-A-204ENST00000396634 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
HLA-A-204ENST00000396634 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
HLA-A-204ENST00000396634 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
HLA-A-204ENST00000396634 A0A1W2PP64 1363 aa23.91■■□□□ 1.42
HLA-A-204ENST00000396634 NPHP3Q7Z494 1330 aa23.91■■□□□ 1.42
HLA-A-204ENST00000396634 PSME1Q06323 249 aa23.91■■□□□ 1.42
HLA-A-204ENST00000396634 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
HLA-A-204ENST00000396634 PLEKHG5O94827 1062 aa23.9■■□□□ 1.42
HLA-A-204ENST00000396634 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
HLA-A-204ENST00000396634 MON2Q7Z3U7 1717 aa23.89■■□□□ 1.42
HLA-A-204ENST00000396634 PUS7Q96PZ0 661 aaKnown RBP23.89■■□□□ 1.41
HLA-A-204ENST00000396634 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
HLA-A-204ENST00000396634 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
HLA-A-204ENST00000396634 ILDR1Q86SU0 546 aaPredicted RBP23.87■■□□□ 1.41
HLA-A-204ENST00000396634 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
HLA-A-204ENST00000396634 SOS2Q07890 1332 aaPredicted RBP23.86■■□□□ 1.41
HLA-A-204ENST00000396634 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
HLA-A-204ENST00000396634 USP6P35125 1406 aa23.86■■□□□ 1.41
HLA-A-204ENST00000396634 LMOD2Q6P5Q4 547 aa23.85■■□□□ 1.41
HLA-A-204ENST00000396634 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
HLA-A-204ENST00000396634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms