RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.37■□□□□ 0.37
TRIM40-207ENST00000396581 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
TRIM40-207ENST00000396581 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM40-207ENST00000396581 KIAA1210Q9ULL0 1709 aa17.36■□□□□ 0.37
TRIM40-207ENST00000396581 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
TRIM40-207ENST00000396581 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
TRIM40-207ENST00000396581 IL27Q8NEV9 243 aa17.35■□□□□ 0.37
TRIM40-207ENST00000396581 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
TRIM40-207ENST00000396581 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
TRIM40-207ENST00000396581 MLECQ14165 292 aa17.33■□□□□ 0.37
TRIM40-207ENST00000396581 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
TRIM40-207ENST00000396581 GSE1Q14687 1217 aa17.32■□□□□ 0.36
TRIM40-207ENST00000396581 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
TRIM40-207ENST00000396581 PPLO60437 1756 aa17.32■□□□□ 0.36
TRIM40-207ENST00000396581 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
TRIM40-207ENST00000396581 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
TRIM40-207ENST00000396581 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
TRIM40-207ENST00000396581 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
TRIM40-207ENST00000396581 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
TRIM40-207ENST00000396581 ZMYM3Q14202 1370 aa17.29■□□□□ 0.36
TRIM40-207ENST00000396581 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
TRIM40-207ENST00000396581 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
TRIM40-207ENST00000396581 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
TRIM40-207ENST00000396581 NEXMIFQ5QGS0 1516 aa17.28■□□□□ 0.36
TRIM40-207ENST00000396581 TMEM131LA2VDJ0 1609 aa17.28■□□□□ 0.36
TRIM40-207ENST00000396581 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
TRIM40-207ENST00000396581 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
TRIM40-207ENST00000396581 E9PSI1 815 aa17.26■□□□□ 0.35
TRIM40-207ENST00000396581 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
TRIM40-207ENST00000396581 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
TRIM40-207ENST00000396581 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
TRIM40-207ENST00000396581 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
TRIM40-207ENST00000396581 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
TRIM40-207ENST00000396581 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
TRIM40-207ENST00000396581 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
TRIM40-207ENST00000396581 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
TRIM40-207ENST00000396581 APAF1O14727 1248 aa17.22■□□□□ 0.35
TRIM40-207ENST00000396581 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
TRIM40-207ENST00000396581 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
TRIM40-207ENST00000396581 USP19O94966 1318 aa17.21■□□□□ 0.34
TRIM40-207ENST00000396581 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
TRIM40-207ENST00000396581 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 BCAR3O75815 825 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
TRIM40-207ENST00000396581 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 MYO3AQ8NEV4 1616 aa17.2■□□□□ 0.34
TRIM40-207ENST00000396581 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
TRIM40-207ENST00000396581 IGHDP01880 384 aa17.19■□□□□ 0.34
TRIM40-207ENST00000396581 RGS3P49796 1198 aa17.19■□□□□ 0.34
TRIM40-207ENST00000396581 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
TRIM40-207ENST00000396581 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
TRIM40-207ENST00000396581 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
TRIM40-207ENST00000396581 AAMPQ13685 434 aa17.16■□□□□ 0.34
TRIM40-207ENST00000396581 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
TRIM40-207ENST00000396581 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
TRIM40-207ENST00000396581 TNRQ92752 1358 aa17.16■□□□□ 0.34
TRIM40-207ENST00000396581 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
TRIM40-207ENST00000396581 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
TRIM40-207ENST00000396581 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
TRIM40-207ENST00000396581 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
TRIM40-207ENST00000396581 TRAK1Q9UPV9 953 aa17.15■□□□□ 0.34
TRIM40-207ENST00000396581 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
TRIM40-207ENST00000396581 SHPRHQ149N8 1683 aa17.14■□□□□ 0.33
TRIM40-207ENST00000396581 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
TRIM40-207ENST00000396581 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
TRIM40-207ENST00000396581 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
TRIM40-207ENST00000396581 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
TRIM40-207ENST00000396581 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM40-207ENST00000396581 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
TRIM40-207ENST00000396581 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
TRIM40-207ENST00000396581 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
TRIM40-207ENST00000396581 CEBPAP49715 358 aaPredicted RBP17.09■□□□□ 0.33
TRIM40-207ENST00000396581 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
TRIM40-207ENST00000396581 SEC24BO95487 1268 aa17.08■□□□□ 0.32
TRIM40-207ENST00000396581 RARSP54136 660 aaKnown RBP17.07■□□□□ 0.32
TRIM40-207ENST00000396581 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
TRIM40-207ENST00000396581 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
TRIM40-207ENST00000396581 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
TRIM40-207ENST00000396581 BECN1Q14457 450 aa17.06■□□□□ 0.32
TRIM40-207ENST00000396581 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
TRIM40-207ENST00000396581 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
TRIM40-207ENST00000396581 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
TRIM40-207ENST00000396581 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
TRIM40-207ENST00000396581 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
TRIM40-207ENST00000396581 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
TRIM40-207ENST00000396581 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
TRIM40-207ENST00000396581 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
TRIM40-207ENST00000396581 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
TRIM40-207ENST00000396581 C3P01024 1663 aa17.05■□□□□ 0.32
TRIM40-207ENST00000396581 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
TRIM40-207ENST00000396581 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
TRIM40-207ENST00000396581 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
TRIM40-207ENST00000396581 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
TRIM40-207ENST00000396581 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
TRIM40-207ENST00000396581 STK26Q9P289 416 aa17.03■□□□□ 0.32
TRIM40-207ENST00000396581 PTPRMP28827 1452 aa17.02■□□□□ 0.32
TRIM40-207ENST00000396581 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.32
TRIM40-207ENST00000396581 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms